RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SULF1Q8IWU6 871 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 CENPTQ96BT3 561 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 CCDC90BQ9GZT6 254 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 STN1Q9H668 368 aaKnown RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 TFIP11Q9UBB9 837 aaKnown RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 TRAF3IP3Q9Y228 551 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 DNAJC6O75061 913 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 CAPN1P07384 714 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 ATP6V1C1P21283 382 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 ADCY7P51828 1080 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 ARL4CP56559 192 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 MYL5Q02045 173 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 DZIP3Q86Y13 1208 aaKnown RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 CNBD1Q8NA66 436 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 SH3TC2Q8TF17 1288 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 NSMCE4AQ9NXX6 385 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 MAP3K20Q9NYL2 800 aaKnown RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 SOX13Q9UN79 622 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 TARSL2A2RTX5 802 aaKnown RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 RPN1P04843 607 aaKnown RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 ALDH1B1P30837 517 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 SUZ12Q15022 739 aaKnown RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 TCEAL5Q5H9L2 206 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 ANO5Q75V66 913 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 THEM5Q8N1Q8 247 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 DDI1Q8WTU0 396 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 CHURC1Q8WUH1 139 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 ADAMTS8Q9UP79 889 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 GAPVD1Q14C86 1478 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 SNX4O95219 450 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 GNAT1P11488 350 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 GRK2P25098 689 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 S100GP29377 79 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 TNFAIP2Q03169 654 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 SLC9C2Q5TAH2 1124 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 ANKS6Q68DC2 871 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 CEP70Q8NHQ1 597 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 DEPDC1BQ8WUY9 529 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 RASSF5Q8WWW0 418 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 ALKBH8Q96BT7 664 aaKnown RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 PAG1Q9NWQ8 432 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 M0R3G1 203 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 DEAF1O75398 565 aaPredicted RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 CCNB2O95067 398 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 CYP19A1P11511 503 aaPredicted RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 MAP4P27816 1152 aaKnown RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 HNMTP50135 292 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 RAD51Q06609 339 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 CLEC16AQ2KHT3 1053 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 SHROOM1Q2M3G4 852 aaPredicted RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 SHQ1Q6PI26 577 aaKnown RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 RSPH1Q8WYR4 309 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 SPATA16Q9BXB7 569 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 MTIF3Q9H2K0 278 aaKnown RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 NIP7Q9Y221 180 aaKnown RBP eCLIP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 SPEF1Q9Y4P9 236 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 DEXIO95424 95 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 HS6ST3Q8IZP7 471 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 REXO1Q8N1G1 1221 aaKnown RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 CATSPER1Q8NEC5 780 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 NSFL1CQ9UNZ2 370 aaKnown RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 MSH2P43246 934 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 PSMD7P51665 324 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 MKRN3Q13064 507 aaKnown RBP6.45□□□□□ -1.38
SCN1A-212ENST00000636194 TBC1D9Q6ZT07 1266 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 ACAD11Q709F0 780 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 VMP1Q96GC9 406 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 LRRC4Q9HBW1 653 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 MYO1AQ9UBC5 1043 aa6.45□□□□□ -1.38
SCN1A-212ENST00000636194 TAF4O00268 1085 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 TRIM13O60858 407 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 ECDO95905 644 aaPredicted RBP6.44□□□□□ -1.38
SCN1A-212ENST00000636194 S100A9P06702 114 aaKnown RBP6.44□□□□□ -1.38
SCN1A-212ENST00000636194 APBA1Q02410 837 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 GTF2H3Q13889 308 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 KIRREL3Q8IZU9 778 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 SIKE1Q9BRV8 207 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 RUBCNLQ9H714 662 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 EML4Q9HC35 981 aaKnown RBP6.44□□□□□ -1.38
SCN1A-212ENST00000636194 ING3Q9NXR8 418 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 AATFQ9NY61 560 aaKnown RBP eCLIP6.44□□□□□ -1.38
SCN1A-212ENST00000636194 BLOC1S6Q9UL45 172 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 PHLPP2Q6ZVD8 1323 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 FOSP01100 380 aaPredicted RBP6.44□□□□□ -1.38
SCN1A-212ENST00000636194 PTK2Q05397 1052 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 POSTNQ15063 836 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 ZMYND11Q15326 602 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 KRT25Q7Z3Z0 450 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 CRLF3Q8IUI8 442 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 DENND6AQ8IWF6 608 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 TTC8Q8TAM2 541 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 URGCPQ8TCY9 931 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 DTNBP1Q96EV8 351 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 ANKRD50Q9ULJ7 1429 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 TBKBP1A7MCY6 615 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 TRIM32Q13049 653 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 FAM102BQ5T8I3 360 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 PKN3Q6P5Z2 889 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 TINF2Q9BSI4 451 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 PACSIN1Q9BY11 444 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms