RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 GRXCR2A6NFK2 248 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 ARID3CA6NKF2 412 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 H3BRJ5 948 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 TRAF5O00463 557 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 CYP27B1O15528 508 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 HOXA2O43364 376 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 FAM20BO75063 409 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 PPFIA4O75335 1185 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 IGKV3-15P01624 115 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 CRYABP02511 175 aaKnown RBP-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 KRT6AP02538 564 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 C4BPAP04003 597 aaKnown RBP-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 OATP04181 439 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 KRT6BP04259 564 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 ASGR2P07307 311 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 CGB3P0DN86 165 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 ZEB1P37275 1124 aaPredicted RBP-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 ARL4AP40617 200 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 KIR2DS4P43632 304 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 KRT6CP48668 564 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 MAPKAPK2P49137 400 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 CDK8P49336 464 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 CARSP49589 748 aaKnown RBP-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 SEC24CP53992 1094 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 CABP4P57796 275 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 KRTAP12-1P59990 96 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 MEF2BQ02080 365 aaPredicted RBP-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 HHEXQ03014 270 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 PTK2Q05397 1052 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 TYRO3Q06418 890 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 EGR3Q06889 387 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 TNK2Q07912 1038 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 EGFEM1PQ0D2K5 195 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 C19orf57Q0VDD7 668 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 FOXI1Q12951 378 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 GRM1Q13255 1194 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 LLGL1Q15334 1064 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 TWIST1Q15672 202 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 INF2Q27J81 1249 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 KRTAP6-3Q3LI67 103 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 FAM76BQ5HYJ3 339 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 TCTE1Q5JU00 501 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF774Q6NX45 483 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 DEF8Q6ZN54 512 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 TAS1R1Q7RTX1 841 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 YTHDF3Q7Z739 585 aaKnown RBP-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 NEK8Q86SG6 692 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 SGMS1Q86VZ5 419 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 LYPD1Q8N2G4 141 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 MFSD4AQ8N468 514 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 LINC00482Q8N8I6 264 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 NRACQ8N912 160 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 JMYQ8N9B5 988 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 PJA1Q8NG27 643 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 SMARCC2Q8TAQ2 1214 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 SSH3Q8TE77 659 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 FAM222BQ8WU58 562 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 STAMQ92783 540 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 C1orf159Q96HA4 380 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF285Q96NJ3 590 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 OR14A2Q96R54 314 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 LARP6Q9BRS8 491 aaKnown RBP-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF670Q9BS34 389 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 TMEM168Q9H0V1 697 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 KLK15Q9H2R5 256 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 GSX1Q9H4S2 264 aaPredicted RBP-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 PIDD1Q9HB75 910 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 MYOZ2Q9NPC6 264 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 CHST11Q9NPF2 352 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 SCRT2Q9NQ03 307 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 PRDM5Q9NQX1 630 aaPredicted RBP-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 SH2B1Q9NRF2 756 aaPredicted RBP-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 ANAPC11Q9NYG5 84 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 FNIP2Q9P278 1114 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 HDAC6Q9UBN7 1215 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 PLA2G2DQ9UNK4 145 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 NEU3Q9UQ49 428 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 ZDHHC9Q9Y397 364 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF175Q9Y473 711 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 MAFBQ9Y5Q3 323 aaPredicted RBP-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 ST14Q9Y5Y6 855 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 NCKAP5LQ9HCH0 1330 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 ARID1AO14497 2285 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 CELSR1Q9NYQ6 3014 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 IGKV1D-17A0A075B6S4 117 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 A0A0J9YXV3 536 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 PRAMEF22A3QJZ6 481 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 CAPN14A8MX76 684 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 PRR33A8MZF0 331 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 WNT9AO14904 365 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 SEMA3EO15041 775 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 NRDCO43847 1150 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 TRAK2O60296 914 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 SMNDC1O75940 238 aaKnown RBP eCLIP-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 MICAL2O94851 1124 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 PRH1P02810 166 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 NGFRP08138 427 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 RARAP10276 462 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 MGMTP16455 207 aa-0.62□□□□□ -2.51
CDKL5-210ENST00000636046 TARSP26639 723 aaKnown RBP-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms