RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 KIAA0753Q2KHM9 967 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 SH3RF1Q7Z6J0 888 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 SESTD1Q86VW0 696 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 ETNPPLQ8TBG4 499 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 PPP1R13LQ8WUF5 828 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 RIT2Q99578 217 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 KATNAL1Q9BW62 490 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 TRPV6Q9H1D0 765 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 TUT1Q9H6E5 874 aaKnown RBP11.03□□□□□ -0.64
LINC00339-210ENST00000635675 PDLIM7Q9NR12 457 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 DDX25Q9UHL0 483 aaKnown RBP11.03□□□□□ -0.64
LINC00339-210ENST00000635675 ZMYND8Q9ULU4 1186 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-210ENST00000635675 TRIM43BA6NCK2 446 aa11.02□□□□□ -0.64
LINC00339-210ENST00000635675 KIF28PB7ZC32 967 aa11.02□□□□□ -0.64
LINC00339-210ENST00000635675 DDX39AO00148 427 aaKnown RBP11.02□□□□□ -0.64
LINC00339-210ENST00000635675 SLC37A4O43826 429 aa11.02□□□□□ -0.64
LINC00339-210ENST00000635675 B4GALT4O60513 344 aa11.02□□□□□ -0.64
LINC00339-210ENST00000635675 CCNT1O60563 726 aaKnown RBP11.02□□□□□ -0.64
LINC00339-210ENST00000635675 LGR5O75473 907 aa11.02□□□□□ -0.64
LINC00339-210ENST00000635675 SYN1P17600 705 aa11.02□□□□□ -0.64
LINC00339-210ENST00000635675 U2AF2P26368 475 aaKnown RBP eCLIP11.02□□□□□ -0.64
LINC00339-210ENST00000635675 CHMP4BP1P59074 171 aa11.02□□□□□ -0.64
LINC00339-210ENST00000635675 UTP14CQ5TAP6 766 aaKnown RBP11.02□□□□□ -0.64
LINC00339-210ENST00000635675 PRPF38BQ5VTL8 546 aaKnown RBP11.02□□□□□ -0.64
LINC00339-210ENST00000635675 ZNF746Q6NUN9 644 aaPredicted RBP11.02□□□□□ -0.64
LINC00339-210ENST00000635675 ABHD15Q6UXT9 468 aa11.02□□□□□ -0.64
LINC00339-210ENST00000635675 TRIM50Q86XT4 487 aa11.02□□□□□ -0.64
LINC00339-210ENST00000635675 TRIM43Q96BQ3 446 aaPredicted RBP11.02□□□□□ -0.64
LINC00339-210ENST00000635675 INTS4Q96HW7 963 aaKnown RBP11.02□□□□□ -0.64
LINC00339-210ENST00000635675 PCYT2Q99447 389 aa11.02□□□□□ -0.64
LINC00339-210ENST00000635675 NAP1L4Q99733 375 aaKnown RBP11.02□□□□□ -0.64
LINC00339-210ENST00000635675 TRMT13Q9NUP7 481 aaKnown RBP11.02□□□□□ -0.64
LINC00339-210ENST00000635675 HDAC6Q9UBN7 1215 aa11.02□□□□□ -0.64
LINC00339-210ENST00000635675 TBX21Q9UL17 535 aa11.02□□□□□ -0.64
LINC00339-210ENST00000635675 IGKV6D-21A0A0A0MT36 114 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 WNT7AO00755 349 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 TLR3O15455 904 aaKnown RBP11.01□□□□□ -0.65
LINC00339-210ENST00000635675 PSMD10O75832 226 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 SUPT20HL2P0C7V6 817 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 KRT76Q01546 638 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 FAM47CQ5HY64 1035 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 LARP1BQ659C4 914 aaKnown RBP11.01□□□□□ -0.65
LINC00339-210ENST00000635675 B3GNT9Q6UX72 402 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 PPP4R3CPQ6ZMV5 832 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 NOSTRINQ8IVI9 506 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 C7orf31Q8N865 590 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 HAS1Q92839 578 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 GJA10Q969M2 543 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 FAM20AQ96MK3 541 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 CTAGE1Q96RT6 745 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 RNPEPQ9H4A4 650 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 SMARCAD1Q9H4L7 1026 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 KCNMB3Q9NPA1 279 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 PRDM5Q9NQX1 630 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-210ENST00000635675 TMEM39AQ9NV64 488 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 ERAP1Q9NZ08 941 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 PCDH10Q9P2E7 1040 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 GTF2IRD1Q9UHL9 959 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 ZNF215Q9UL58 517 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-210ENST00000635675 EMSYQ7Z589 1322 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 TBX3O15119 743 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 GAS7O60861 476 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 ITGB8P26012 769 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 HOXC8P31273 242 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 HIC1Q14526 733 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 LRCH2Q5VUJ6 765 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 GDF6Q6KF10 455 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-210ENST00000635675 PLPPR4Q7Z2D5 763 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 SMAP1Q8IYB5 467 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-210ENST00000635675 GLG1Q92896 1179 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 TEKT3Q9BXF9 490 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 PRKAG2Q9UGJ0 569 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 PCDHA10Q9Y5I2 948 aa11.01□□□□□ -0.65
LINC00339-210ENST00000635675 H3BQV1 296 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 TIMP1P01033 207 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 SMIM10L2AP0DMW4 78 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 SMIM10L2BP0DMW5 78 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 MAGEA10P43363 369 aaPredicted RBP11□□□□□ -0.65
LINC00339-210ENST00000635675 TRAPPC10P48553 1259 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 STAT5BP51692 787 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 GNL2Q13823 731 aaKnown RBP11□□□□□ -0.65
LINC00339-210ENST00000635675 PTGISQ16647 500 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 MIS18BP1Q6P0N0 1132 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 CCDC60Q8IWA6 550 aaPredicted RBP11□□□□□ -0.65
LINC00339-210ENST00000635675 HSCBQ8IWL3 235 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 AFAP1L1Q8TED9 768 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 GDF15Q99988 308 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 NOC4LQ9BVI4 516 aaKnown RBP11□□□□□ -0.65
LINC00339-210ENST00000635675 UNC45AQ9H3U1 944 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 AZI2Q9H6S1 392 aa11□□□□□ -0.65
LINC00339-210ENST00000635675 LTBP2Q14767 1821 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 WDR64B1ANS9 1081 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 PSAPP07602 524 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 CYP2C9P11712 490 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 RAG1P15918 1043 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 ATP2B1P20020 1258 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 PDCP20941 246 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 SFNP31947 248 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 SLC26A2P50443 739 aa10.99□□□□□ -0.65
LINC00339-210ENST00000635675 TOB1P50616 345 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms