RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 CLIC6Q96NY7 704 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PHF20Q9BVI0 1012 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 ASH2LQ9UBL3 628 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 FAM47E-STBD1D6RA91 191 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 NPIPB8E9PQR5 432 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 AQP7O14520 342 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PDPK1O15530 556 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 APPP05067 770 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PABPC1P11940 636 aaKnown RBP4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 ZNF28P17035 718 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 ATP2B1P20020 1258 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 GRK2P25098 689 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 GRK3P35626 688 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 SF1Q15637 639 aaKnown RBP4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 HABP4Q5JVS0 413 aaKnown RBP4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 NSMFQ6X4W1 530 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 LBX2Q6XYB7 198 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 TXNDC5Q8NBS9 432 aaKnown RBP4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 UHMK1Q8TAS1 419 aaKnown RBP4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 WWC2-AS2Q96NR7 200 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 ALG1Q9BT22 464 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 LGR4Q9BXB1 951 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 CDIP1Q9H305 208 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 ARHGEF4Q9NR80 690 aa4.54□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 CCDC163A0A0D9SF12 145 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 WNT9AO14904 365 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 MUSKO15146 869 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 B4GALT3O60512 393 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 NANOS3P60323 173 aaKnown RBP4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 SUMO1P63165 101 aaKnown RBP4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 ADAM9Q13443 819 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 SF3A1Q15459 793 aaKnown RBP4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 TEPPQ6URK8 271 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 USP53Q70EK8 1073 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 OTOP3Q7RTS5 596 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 CIR1Q86X95 450 aaPredicted RBP4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 SCUBE1Q8IWY4 988 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 OSBP2Q969R2 916 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 NAF1Q96HR8 494 aaKnown RBP4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 LCORQ96JN0 433 aaPredicted RBP4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 IPO9Q96P70 1041 aaKnown RBP4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 CEP89Q96ST8 783 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 SPATA9Q9BWV2 254 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 DLL4Q9NR61 685 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 ST7Q9NRC1 585 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 FBXL7Q9UJT9 491 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PCSK5Q92824 1860 aa4.53□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 LCP1P13796 627 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 GRIA2P42262 883 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 SELENOPP49908 381 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 EPHA5P54756 1037 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 NLGN4XQ8N0W4 816 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PTPRN2Q92932 1015 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 MKL1Q969V6 931 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 ZNF428Q96B54 188 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 SYT3Q9BQG1 590 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 TANGO6Q9C0B7 1094 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 SEMA4AQ9H3S1 761 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 TCAF1Q9Y4C2 921 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 TESMINQ9Y4I5 508 aa4.52□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 GSTA4O15217 222 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PRODHO43272 600 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 GNAT1P11488 350 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 GABREP78334 506 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 MTERF2Q49AM1 385 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 VASNQ6EMK4 673 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PKN3Q6P5Z2 889 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 KLHL36Q8N4N3 616 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 ZBTB38Q8NAP3 1195 aaPredicted RBP4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 ARRDC4Q8NCT1 418 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 IGDCC4Q8TDY8 1250 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 YTHDC1Q96MU7 727 aaKnown RBP4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 IKZF4Q9H2S9 585 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 MSL2Q9HCI7 577 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 FTSJ1Q9UET6 329 aa4.51□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 DDX3XO00571 662 aaKnown RBP eCLIP4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 EFCAB14O75071 495 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 LRG1P02750 347 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 SOD2P04179 222 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 FAHP16930 419 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 GJA4P35212 333 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 STAT5AP42229 794 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 RBL2Q08999 1139 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 SERINC3Q13530 473 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PRAMEF18Q5VWM3 479 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 REXO1L1PQ8IX06 675 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 FAM26EQ8N5C1 309 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 TMEM168Q9H0V1 697 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 L2HGDHQ9H9P8 463 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 BARX1Q9HBU1 254 aaPredicted RBP4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PODXL2Q9NZ53 605 aa4.5□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 TRBV23-1A0A0A0MS06 115 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PATE3B3GLJ2 98 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 ADCY3O60266 1144 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 MSCO60682 206 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 ZNF623O75123 536 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 ENO2P09104 434 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 DPTQ07507 201 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 SSRP1Q08945 709 aaKnown RBP4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PAK1Q13153 545 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms