RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ICAM3P32942 547 aa23.31■■□□□ 1.32
TARDBP-228ENST00000629725 ADAM17P78536 824 aa23.31■■□□□ 1.32
TARDBP-228ENST00000629725 HDAC1Q13547 482 aaPredicted RBP23.31■■□□□ 1.32
TARDBP-228ENST00000629725 TRIM50Q86XT4 487 aa23.31■■□□□ 1.32
TARDBP-228ENST00000629725 CLP1Q92989 425 aaKnown RBP23.31■■□□□ 1.32
TARDBP-228ENST00000629725 LNPKQ9C0E8 428 aa23.31■■□□□ 1.32
TARDBP-228ENST00000629725 PALM3A6NDB9 673 aaPredicted RBP23.3■■□□□ 1.32
TARDBP-228ENST00000629725 CHRNA1P02708 482 aa23.3■■□□□ 1.32
TARDBP-228ENST00000629725 MRPS9P82933 396 aaKnown RBP23.3■■□□□ 1.32
TARDBP-228ENST00000629725 SMAD4Q13485 552 aaKnown RBP23.3■■□□□ 1.32
TARDBP-228ENST00000629725 RNF135Q8IUD6 432 aa23.3■■□□□ 1.32
TARDBP-228ENST00000629725 LMBR1Q8WVP7 490 aa23.3■■□□□ 1.32
TARDBP-228ENST00000629725 INPP4AQ96PE3 977 aaPredicted RBP23.3■■□□□ 1.32
TARDBP-228ENST00000629725 DSCC1Q9BVC3 393 aa23.3■■□□□ 1.32
TARDBP-228ENST00000629725 IGFLR1Q9H665 355 aa23.3■■□□□ 1.32
TARDBP-228ENST00000629725 SPATA31C2B4DYI2 1134 aa23.29■■□□□ 1.32
TARDBP-228ENST00000629725 STXBP3O00186 592 aa23.29■■□□□ 1.32
TARDBP-228ENST00000629725 TBX10O75333 385 aa23.29■■□□□ 1.32
TARDBP-228ENST00000629725 TECTAO75443 2155 aa23.29■■□□□ 1.32
TARDBP-228ENST00000629725 CSPG5O95196 566 aa23.29■■□□□ 1.32
TARDBP-228ENST00000629725 GHRP10912 638 aa23.29■■□□□ 1.32
TARDBP-228ENST00000629725 GTF2F1P35269 517 aaKnown RBP eCLIP23.29■■□□□ 1.327e-26■■■□□ 18.2
TARDBP-228ENST00000629725 UTP14CQ5TAP6 766 aaKnown RBP23.29■■□□□ 1.32
TARDBP-228ENST00000629725 PIGSQ96S52 555 aa23.29■■□□□ 1.32
TARDBP-228ENST00000629725 RC3H2Q9HBD1 1191 aaKnown RBP23.29■■□□□ 1.32
TARDBP-228ENST00000629725 DIAPH3Q9NSV4 1193 aa23.29■■□□□ 1.32
TARDBP-228ENST00000629725 RTEL1Q9NZ71 1219 aa23.29■■□□□ 1.32
TARDBP-228ENST00000629725 NRCAMQ92823 1304 aa23.29■■□□□ 1.32
TARDBP-228ENST00000629725 TTC3P53804 2025 aa23.28■■□□□ 1.32
TARDBP-228ENST00000629725 FIBPO43427 364 aa23.28■■□□□ 1.32
TARDBP-228ENST00000629725 MMP1P03956 469 aa23.28■■□□□ 1.32
TARDBP-228ENST00000629725 SEMA3FQ13275 785 aa23.28■■□□□ 1.32
TARDBP-228ENST00000629725 BTG3Q14201 252 aaPredicted RBP23.28■■□□□ 1.32
TARDBP-228ENST00000629725 SEC23AQ15436 765 aa23.28■■□□□ 1.32
TARDBP-228ENST00000629725 EDAQ92838 391 aa23.28■■□□□ 1.32
TARDBP-228ENST00000629725 PLVAPQ9BX97 442 aa23.28■■□□□ 1.32
TARDBP-228ENST00000629725 RIOX1Q9H6W3 641 aa23.28■■□□□ 1.32
TARDBP-228ENST00000629725 EHMT1Q9H9B1 1298 aa23.28■■□□□ 1.32
TARDBP-228ENST00000629725 CD207Q9UJ71 328 aa23.28■■□□□ 1.32
TARDBP-228ENST00000629725 SUPT16HQ9Y5B9 1047 aaKnown RBP23.28■■□□□ 1.32
TARDBP-228ENST00000629725 FRMPD4Q14CM0 1322 aa23.28■■□□□ 1.32
TARDBP-228ENST00000629725 ENPP3O14638 875 aa23.27■■□□□ 1.32
TARDBP-228ENST00000629725 LINC01565O15544 149 aa23.27■■□□□ 1.32
TARDBP-228ENST00000629725 TAF2Q6P1X5 1199 aa23.27■■□□□ 1.32
TARDBP-228ENST00000629725 ZNF689Q96CS4 500 aaPredicted RBP23.27■■□□□ 1.32
TARDBP-228ENST00000629725 ALG13Q9NP73 1137 aaKnown RBP23.27■■□□□ 1.32
TARDBP-228ENST00000629725 NDUFV1P49821 464 aa23.26■■□□□ 1.31
TARDBP-228ENST00000629725 SP4Q02446 784 aa23.26■■□□□ 1.31
TARDBP-228ENST00000629725 ADAM15Q13444 863 aa23.26■■□□□ 1.31
TARDBP-228ENST00000629725 LPIN1Q14693 890 aa23.26■■□□□ 1.31
TARDBP-228ENST00000629725 SLC35G1Q2M3R5 365 aa23.26■■□□□ 1.31
TARDBP-228ENST00000629725 RSPH3Q86UC2 560 aa23.26■■□□□ 1.31
TARDBP-228ENST00000629725 TELO2Q9Y4R8 837 aa23.26■■□□□ 1.31
TARDBP-228ENST00000629725 MYO15AQ9UKN7 3530 aa23.26■■□□□ 1.31
TARDBP-228ENST00000629725 CFAP54Q96N23 3096 aa23.26■■□□□ 1.31
TARDBP-228ENST00000629725 PNMA6FA0A0J9YX94 578 aa23.25■■□□□ 1.31
TARDBP-228ENST00000629725 HIP1O00291 1037 aa23.25■■□□□ 1.31
TARDBP-228ENST00000629725 MGAT3Q09327 533 aa23.25■■□□□ 1.31
TARDBP-228ENST00000629725 RUFY4Q6ZNE9 571 aa23.25■■□□□ 1.31
TARDBP-228ENST00000629725 PPP2R3CQ969Q6 453 aa23.25■■□□□ 1.31
TARDBP-228ENST00000629725 SENP7Q9BQF6 1050 aa23.25■■□□□ 1.31
TARDBP-228ENST00000629725 PLAGL2Q9UPG8 496 aa23.25■■□□□ 1.31
TARDBP-228ENST00000629725 KIAA1671Q9BY89 1806 aa23.24■■□□□ 1.31
TARDBP-228ENST00000629725 CYTH3O43739 400 aa23.24■■□□□ 1.31
TARDBP-228ENST00000629725 DGKIO75912 1065 aa23.24■■□□□ 1.31
TARDBP-228ENST00000629725 CAMK1Q14012 370 aa23.24■■□□□ 1.31
TARDBP-228ENST00000629725 GRM4Q14833 912 aa23.24■■□□□ 1.31
TARDBP-228ENST00000629725 CYB5R4Q7L1T6 521 aa23.24■■□□□ 1.31
TARDBP-228ENST00000629725 BMP8AQ7Z5Y6 402 aa23.24■■□□□ 1.31
TARDBP-228ENST00000629725 P2RX5Q93086 422 aa23.24■■□□□ 1.31
TARDBP-228ENST00000629725 EYA4O95677 639 aa23.23■■□□□ 1.31
TARDBP-228ENST00000629725 PBXIP1Q96AQ6 731 aa23.23■■□□□ 1.31
TARDBP-228ENST00000629725 MSLNLQ96KJ4 702 aa23.23■■□□□ 1.31
TARDBP-228ENST00000629725 PHOX2BQ99453 314 aa23.23■■□□□ 1.31
TARDBP-228ENST00000629725 OSBPL3Q9H4L5 887 aa23.23■■□□□ 1.31
TARDBP-228ENST00000629725 TCF7P36402 384 aaPredicted RBP23.22■■□□□ 1.31
TARDBP-228ENST00000629725 RRP1P56182 461 aaKnown RBP23.22■■□□□ 1.31
TARDBP-228ENST00000629725 PPFIA1Q13136 1202 aa23.22■■□□□ 1.31
TARDBP-228ENST00000629725 NAALADL2Q58DX5 795 aa23.22■■□□□ 1.31
TARDBP-228ENST00000629725 FBXO47Q5MNV8 452 aa23.22■■□□□ 1.31
TARDBP-228ENST00000629725 PCNX4Q63HM2 1172 aa23.22■■□□□ 1.31
TARDBP-228ENST00000629725 B4GALNT3Q6L9W6 998 aa23.22■■□□□ 1.31
TARDBP-228ENST00000629725 TSHZ1Q6ZSZ6 1077 aa23.22■■□□□ 1.31
TARDBP-228ENST00000629725 TRIM67Q6ZTA4 783 aa23.22■■□□□ 1.31
TARDBP-228ENST00000629725 PLEKHM2Q8IWE5 1019 aa23.22■■□□□ 1.31
TARDBP-228ENST00000629725 GIMAP8Q8ND71 665 aaPredicted RBP23.22■■□□□ 1.31
TARDBP-228ENST00000629725 PRSS33Q8NF86 280 aa23.22■■□□□ 1.31
TARDBP-228ENST00000629725 DNAJB3Q8WWF6 145 aa23.22■■□□□ 1.31
TARDBP-228ENST00000629725 TUBE1Q9UJT0 475 aa23.22■■□□□ 1.31
TARDBP-228ENST00000629725 TMEM221A6NGB7 291 aa23.21■■□□□ 1.31
TARDBP-228ENST00000629725 M0R296 226 aa23.21■■□□□ 1.31
TARDBP-228ENST00000629725 PTPN5P54829 565 aa23.21■■□□□ 1.31
TARDBP-228ENST00000629725 TRDNQ13061 729 aa23.21■■□□□ 1.31
TARDBP-228ENST00000629725 PKN1Q16512 942 aa23.21■■□□□ 1.31
TARDBP-228ENST00000629725 IER5LQ5T953 404 aa23.21■■□□□ 1.31
TARDBP-228ENST00000629725 NLRX1Q86UT6 975 aa23.21■■□□□ 1.31
TARDBP-228ENST00000629725 PRRX2Q99811 253 aa23.21■■□□□ 1.31
TARDBP-228ENST00000629725 CDY2AQ9Y6F7 541 aa23.21■■□□□ 1.31
TARDBP-228ENST00000629725 MRPL42Q9Y6G3 142 aaKnown RBP23.21■■□□□ 1.31
TARDBP-228ENST00000629725 LOXHD1Q8IVV2 1947 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms