RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 ENPP3O14638 875 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 PPFIA3O75145 1194 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 PRB1P04280 392 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 SRFP11831 508 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 IL15P40933 162 aaPredicted RBP7.28□□□□□ -1.24
LINC00649-220ENST00000628906 MVPQ14764 893 aaKnown RBP7.28□□□□□ -1.24
LINC00649-220ENST00000628906 PWP2Q15269 919 aaKnown RBP7.28□□□□□ -1.24
LINC00649-220ENST00000628906 LLGL2Q6P1M3 1020 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 RASGRP2Q7LDG7 609 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 OTOP3Q7RTS5 596 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 SERINC5Q86VE9 423 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 CERS3Q8IU89 383 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 CMTR2Q8IYT2 770 aaKnown RBP7.28□□□□□ -1.24
LINC00649-220ENST00000628906 SLC44A3Q8N4M1 653 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 C7orf31Q8N865 590 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 SPATA18Q8TC71 538 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 GPR20Q99678 358 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 BCO2Q9BYV7 579 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 ACAD9Q9H845 621 aa7.28□□□□□ -1.24
LINC00649-220ENST00000628906 CREBBPQ92793 2442 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 J3QKU1 62 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 HAS3O00219 553 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 WEE2P0C1S8 567 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 EEF2P13639 858 aaKnown RBP7.27□□□□□ -1.25
LINC00649-220ENST00000628906 ARID4AP29374 1257 aaPredicted RBP7.27□□□□□ -1.25
LINC00649-220ENST00000628906 THPOP40225 353 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 USP5P45974 858 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 LPAL2Q16609 132 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 STPG1Q5TH74 334 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 LRRC47Q8N1G4 583 aaKnown RBP7.27□□□□□ -1.25
LINC00649-220ENST00000628906 AFG1LQ8WV93 481 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 COPS5Q92905 334 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 TSR2Q969E8 191 aaKnown RBP7.27□□□□□ -1.25
LINC00649-220ENST00000628906 OSBPL6Q9BZF3 934 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 FOXQ1Q9C009 403 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 GOPCQ9HD26 462 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 ARHGEF3Q9NR81 526 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 MSRB2Q9Y3D2 182 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 NEUROG3Q9Y4Z2 214 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 APC2O95996 2303 aa7.27□□□□□ -1.25
LINC00649-220ENST00000628906 PLXNA4Q9HCM2 1894 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 AKR1B1P15121 316 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 CASTP20810 708 aaKnown RBP7.26□□□□□ -1.25
LINC00649-220ENST00000628906 MAGEA9P43362 315 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 TROAPQ12815 778 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 HIC1Q14526 733 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 PPP2R5BQ15173 497 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 NONOQ15233 471 aaKnown RBP eCLIP7.26□□□□□ -1.25
LINC00649-220ENST00000628906 DCLRE1AQ6PJP8 1040 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 GPR152Q8TDT2 470 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 NXPE3Q969Y0 559 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 CCDC17Q96LX7 622 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 MYL10Q9BUA6 226 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 DDX23Q9BUQ8 820 aaKnown RBP7.26□□□□□ -1.25
LINC00649-220ENST00000628906 KANSL2Q9H9L4 492 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 HOMER2Q9NSB8 354 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 CYP39A1Q9NYL5 469 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 CTDP1Q9Y5B0 961 aaPredicted RBP7.26□□□□□ -1.25
LINC00649-220ENST00000628906 HCFC2Q9Y5Z7 792 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 C2CD3Q4AC94 2353 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 RELNP78509 3460 aa7.26□□□□□ -1.25
LINC00649-220ENST00000628906 SDK1Q7Z5N4 2213 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 TICRRQ7Z2Z1 1910 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 PATJQ8NI35 1801 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 KANSL1LA0AUZ9 987 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 HIDE1A8MVS5 230 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 GIPC1O14908 333 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 CAND2O75155 1236 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 VAMP4O75379 141 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 CYP2E1P05181 493 aaPredicted RBP7.25□□□□□ -1.25
LINC00649-220ENST00000628906 POLR3DP05423 398 aaPredicted RBP7.25□□□□□ -1.25
LINC00649-220ENST00000628906 FDX1P10109 184 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 TDGF1P13385 188 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 PSEN2P49810 448 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 NRLP54845 237 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 PDE4BQ07343 736 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 ZNF252P-AS1Q0IIN9 211 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 TKFCQ3LXA3 575 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 AASDHQ4L235 1098 aaPredicted RBP7.25□□□□□ -1.25
LINC00649-220ENST00000628906 TSSK4Q6SA08 328 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 SCFD2Q8WU76 684 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 SLC39A7Q92504 469 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 SHDQ96IW2 340 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 NUP88Q99567 741 aaPredicted RBP7.25□□□□□ -1.25
LINC00649-220ENST00000628906 CLMPQ9H6B4 373 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 NGRNQ9NPE2 291 aaKnown RBP7.25□□□□□ -1.25
LINC00649-220ENST00000628906 PRMT8Q9NR22 394 aaPredicted RBP7.25□□□□□ -1.25
LINC00649-220ENST00000628906 SWAP70Q9UH65 585 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 SRPK3Q9UPE1 567 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 LZTS1Q9Y250 596 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 AKAP2Q9Y2D5 859 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 PCDHB12Q9Y5F1 795 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 FBN2P35556 2912 aa7.25□□□□□ -1.25
LINC00649-220ENST00000628906 URB1O60287 2271 aaKnown RBP7.25□□□□□ -1.25
LINC00649-220ENST00000628906 NBPF19A0A087WUL8 3843 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 NAV1Q8NEY1 1877 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 FAM221BA6H8Z2 402 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 FGF18O76093 207 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 ZNF806P0C7X5 589 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 TXNP10599 105 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms