RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 PAK6Q9NQU5 681 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 TBC1D22BQ9NU19 505 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 FAM184BQ9ULE4 1060 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 CEP131Q9UPN4 1083 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 GNEQ9Y223 722 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 Q9Y3F1 56 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 MSCO60682 206 aa11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 DUSP11O75319 330 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 FARP2O94887 1054 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 OR52Z1P0C646 297 aa11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 TXNP10599 105 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 ATP2B1P20020 1258 aa11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 TNFAIP2Q03169 654 aa11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 DNM1Q05193 864 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 ARHGAP1Q07960 439 aa11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 PTGDRQ13258 359 aa11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 LY6KQ17RY6 165 aa11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 CELF3Q5SZQ8 465 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 TMEM63BQ5T3F8 832 aa11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 LINC00301Q8NCQ3 95 aa11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 UPF3AQ9H1J1 476 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 HMX1Q9NP08 348 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 DDX20Q9UHI6 824 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 VAV3Q9UKW4 847 aa11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 CFAP45Q9UL16 551 aa11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 CLIC4Q9Y696 253 aa11.13□□□□□ -0.63
SOX2-OT-249ENST00000628810 GGPS1O95749 300 aa11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 GH1P01241 217 aa11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 HOXD8P13378 290 aaPredicted RBP11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 KRT85P78386 507 aa11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 SPIRE1Q08AE8 756 aa11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 PPP2R5CQ13362 524 aa11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 SLC39A14Q15043 492 aa11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 LRCH2Q5VUJ6 765 aa11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 CLEC17AQ6ZS10 378 aa11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 TNPO1Q92973 898 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 SDF4Q9BRK5 362 aa11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 MCOLN1Q9GZU1 580 aa11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 JPH1Q9HDC5 661 aaPredicted RBP11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 CENPFP49454 3210 aa11.12□□□□□ -0.63
SOX2-OT-249ENST00000628810 SYNRGQ9UMZ2 1314 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 GTPBP6O43824 516 aaPredicted RBP11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 GAS7O60861 476 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 PPP6R2O75170 966 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 ADAMTS4O75173 837 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 BAG4O95429 457 aaKnown RBP11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 CCNE2O96020 404 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 RARBP10826 455 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 CCL5P13501 91 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 CST5P28325 142 aaPredicted RBP11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 PBX2P40425 430 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 GJA9P57773 515 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 KRT76Q01546 638 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 LAMC2Q13753 1193 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 DSG2Q14126 1118 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 ZNF746Q6NUN9 644 aaPredicted RBP11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 TLK2Q86UE8 772 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 SMAP1Q8IYB5 467 aaPredicted RBP11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 IGSF22Q8N9C0 903 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 RDM1Q8NG50 284 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 PPTC7Q8NI37 304 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 KCNG4Q8TDN1 519 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 FERMT2Q96AC1 680 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 LENG1Q96BZ8 264 aaPredicted RBP11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 TEKT3Q9BXF9 490 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 UNC93B1Q9H1C4 597 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 SLC9A2Q9UBY0 812 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 LHX6Q9UPM6 363 aa11.11□□□□□ -0.63
SOX2-OT-249ENST00000628810 ELP1O95163 1332 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 DOCK5Q9H7D0 1870 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 A6NJR5 290 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 SPTLC2O15270 562 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 CTAGE5O15320 804 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 ATG7O95352 703 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 SFNP31947 248 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 MTFR1Q15390 333 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 IL17AQ16552 155 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 HSDL1Q3SXM5 330 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 FOXD4L6Q3SYB3 417 aaPredicted RBP11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 GJC2Q5T442 439 aaPredicted RBP11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 FOXD4L3Q6VB84 417 aaPredicted RBP11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 CYFIP1Q7L576 1253 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 DHX37Q8IY37 1157 aaKnown RBP11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 OR6J1Q8NGC5 347 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 LEO1Q8WVC0 666 aaPredicted RBP11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 COPS5Q92905 334 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 GJA10Q969M2 543 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 SCAND2PQ9GZW5 306 aaPredicted RBP11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 UNC45AQ9H3U1 944 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 BCAS3Q9H6U6 928 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 TTC12Q9H892 705 aaPredicted RBP11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 PKD2L1Q9P0L9 805 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 TFIP11Q9UBB9 837 aaKnown RBP11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 FBXO2Q9UK22 296 aaPredicted RBP11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 RCOR1Q9UKL0 485 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 PCDHA12Q9UN75 941 aa11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 SRPRBQ9Y5M8 271 aaKnown RBP11.1□□□□□ -0.63
SOX2-OT-249ENST00000628810 EMSYQ7Z589 1322 aa11.09□□□□□ -0.63
SOX2-OT-249ENST00000628810 IGKV6D-21A0A0A0MT36 114 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms