RNA–Protein interactions for RNA: ENST00000628211.2

SOX2-OT-245, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 847 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-245ENST00000628211 PCDH10Q9P2E7 1040 aa12.12□□□□□ -0.47
SOX2-OT-245ENST00000628211 DDX25Q9UHL0 483 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-245ENST00000628211 TRIP12Q14669 1992 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 TANC1Q9C0D5 1861 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 H3BQV1 296 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 H3BRB1 525 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 HAS3O00219 553 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 ZNF286BP0CG31 522 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 ARP10275 920 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 GNAT1P11488 350 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 PDIA4P13667 645 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 PTGS1P23219 599 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 GJB2P29033 226 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 SFNP31947 248 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 TCF7P36402 384 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 TRAPPC10P48553 1259 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 FXR1P51114 621 aaKnown RBP eCLIP12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 NR5A1Q13285 461 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 KIAA0753Q2KHM9 967 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 LETM2Q2VYF4 491 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 NBPF20Q3BBV1 942 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 FAM47CQ5HY64 1035 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 FAM160B1Q5W0V3 765 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 SLFN12Q8IYM2 578 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 C7orf31Q8N865 590 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 CYP2W1Q8TAV3 490 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 TNFRSF25Q93038 417 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 LENG9Q96B70 501 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 FAM20AQ96MK3 541 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 LBHD1Q9BQE6 289 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 TUT1Q9H6E5 874 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 PDLIM7Q9NR12 457 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 GJB4Q9NTQ9 266 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 ERAP1Q9NZ08 941 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 PKD2L1Q9P0L9 805 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 NOL7Q9UMY1 257 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 NOD1Q9Y239 953 aa12.11□□□□□ -0.47
SOX2-OT-245ENST00000628211 BTBD18B2RXH4 712 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 PITPNM1O00562 1244 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 ADAMTS3O15072 1205 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 MSH4O15457 936 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 CCNT1O60563 726 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 GAS7O60861 476 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 LGR5O75473 907 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 ATG7O95352 703 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 BAG4O95429 457 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 CD4P01730 458 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 RPLP2P05387 115 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 JAK3P52333 1124 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 FOSBP53539 338 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 ACTR2P61160 394 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 PSMC6P62333 389 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 SP4Q02446 784 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 ITGB3BPQ13352 177 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 LRCH2Q5VUJ6 765 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 MIS18BP1Q6P0N0 1132 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 OXER1Q8TDS5 423 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 KAT2BQ92831 832 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 GLG1Q92896 1179 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 SLC5A5Q92911 643 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 C16orf70Q9BSU1 422 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 PRDM5Q9NQX1 630 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 TMEM39AQ9NV64 488 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 GTF2IRD1Q9UHL9 959 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 GRIN2DO15399 1336 aa12.1□□□□□ -0.47
SOX2-OT-245ENST00000628211 WDR64B1ANS9 1081 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 MARCH6O60337 910 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 SORBS3O60504 671 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 TDP2O95551 362 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 PSAPP07602 524 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 RAG1P15918 1043 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 U2AF2P26368 475 aaKnown RBP eCLIP12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 GUCY1B3Q02153 619 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 FAAP100Q0VG06 881 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 BFSP2Q13515 415 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 UTP14CQ5TAP6 766 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 PLPPR4Q7Z2D5 763 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 NOSTRINQ8IVI9 506 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 CAGE1Q8TC20 777 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 AFAP1L1Q8TED9 768 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 TBX21Q9UL17 535 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 PCDHA10Q9Y5I2 948 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 NRCAMQ92823 1304 aa12.09□□□□□ -0.47
SOX2-OT-245ENST00000628211 GSTTP1A0A1W2PQM5 241 aa12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 C17orf102A2RUQ5 167 aa12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 DDX39AO00148 427 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 BACH1O14867 736 aa12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 DHX15O43143 795 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 B4GALT4O60513 344 aa12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 NEMFO60524 1076 aa12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 DKC1O60832 514 aaKnown RBP eCLIP12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 PARNO95453 639 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 HSP90AA1P07900 732 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 STAT5BP51692 787 aa12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 PTGISQ16647 500 aa12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 LARP1BQ659C4 914 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 ETNPPLQ8TBG4 499 aa12.08□□□□□ -0.48
SOX2-OT-245ENST00000628211 FAM167AQ96KS9 214 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms