RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 FERMT2Q96AC1 680 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 AMNQ9BXJ7 453 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 MAF1Q9H063 256 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 AP5M1Q9H0R1 490 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 CPVLQ9H3G5 476 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 JMJD4Q9H9V9 463 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 ZMYND8Q9ULU4 1186 aaPredicted RBP7.42□□□□□ -1.22
TCF4-249ENST00000625716 ATP11BQ9Y2G3 1177 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 CNTNAP5Q8WYK1 1306 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 LAMA4Q16363 1823 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 LOC102724159A0A0B4J2E5 919 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 PALM3A6NDB9 673 aaPredicted RBP7.41□□□□□ -1.22
TCF4-249ENST00000625716 ZBTB5O15062 677 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 C6orf222P0C671 652 aaPredicted RBP7.41□□□□□ -1.22
TCF4-249ENST00000625716 CALM1P0DP23 149 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 CALM2P0DP24 149 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 CALM3P0DP25 149 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 ALDH5A1P51649 535 aaPredicted RBP7.41□□□□□ -1.22
TCF4-249ENST00000625716 RTP1P59025 263 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 KRT32Q14532 448 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 GRM4Q14833 912 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 NECTIN1Q15223 517 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 PWP2Q15269 919 aaKnown RBP7.41□□□□□ -1.22
TCF4-249ENST00000625716 QRICH1Q2TAL8 776 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 ERICH6BQ5W0A0 696 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 STOX1Q6ZVD7 989 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 HOMER1Q86YM7 354 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 MB21D2Q8IYB1 491 aaPredicted RBP7.41□□□□□ -1.22
TCF4-249ENST00000625716 DNERQ8NFT8 737 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 CLEC4DQ8WXI8 215 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 LENG1Q96BZ8 264 aaPredicted RBP7.41□□□□□ -1.22
TCF4-249ENST00000625716 TMEM87BQ96K49 555 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 LBHD1Q9BQE6 289 aaPredicted RBP7.41□□□□□ -1.22
TCF4-249ENST00000625716 MTA3Q9BTC8 594 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 GDPD2Q9HCC8 539 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 GPAMQ9HCL2 828 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 VTA1Q9NP79 307 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 PPP4R2Q9NY27 417 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 MAD2L2Q9UI95 211 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 PHF24Q9UPV7 400 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 SLC12A7Q9Y666 1083 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 TAF6LQ9Y6J9 622 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 SYNRGQ9UMZ2 1314 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 HTTP42858 3142 aa7.41□□□□□ -1.22
TCF4-249ENST00000625716 PNMA6FA0A0J9YX94 578 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 DYNC1LI2O43237 492 aaPredicted RBP7.4□□□□□ -1.22
TCF4-249ENST00000625716 DDAH1O94760 285 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 REC8O95072 547 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 CFBP00751 764 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 GNAQP50148 359 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 ACLYP53396 1101 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 GJA9P57773 515 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 ANTXR2P58335 489 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 RPS6P62753 249 aaKnown RBP7.4□□□□□ -1.22
TCF4-249ENST00000625716 FGD1P98174 961 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 KCNA10Q16322 511 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 BRDTQ58F21 947 aaPredicted RBP7.4□□□□□ -1.22
TCF4-249ENST00000625716 GNASQ5JWF2 1037 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 ARHGEF16Q5VV41 709 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 SLC30A10Q6XR72 485 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 FBXO16Q8IX29 292 aaPredicted RBP7.4□□□□□ -1.22
TCF4-249ENST00000625716 ZNF654Q8IZM8 581 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 IGDCC4Q8TDY8 1250 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 NSUN6Q8TEA1 469 aaKnown RBP7.4□□□□□ -1.22
TCF4-249ENST00000625716 RRP36Q96EU6 259 aaKnown RBP7.4□□□□□ -1.22
TCF4-249ENST00000625716 SCARF2Q96GP6 870 aaPredicted RBP7.4□□□□□ -1.22
TCF4-249ENST00000625716 FGD4Q96M96 766 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 GLT1D1Q96MS3 346 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 NEK1Q96PY6 1258 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 PIGSQ96S52 555 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 MAP3K14Q99558 947 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 LZTS2Q9BRK4 669 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 PRDM5Q9NQX1 630 aaPredicted RBP7.4□□□□□ -1.22
TCF4-249ENST00000625716 STARD7Q9NQZ5 370 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 SEC63Q9UGP8 760 aaKnown RBP7.4□□□□□ -1.22
TCF4-249ENST00000625716 DOLKQ9UPQ8 538 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 Q9Y3F1 56 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 PCDHA1Q9Y5I3 950 aa7.4□□□□□ -1.22
TCF4-249ENST00000625716 ZNFX1Q9P2E3 1918 aaKnown RBP7.39□□□□□ -1.23
TCF4-249ENST00000625716 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.39□□□□□ -1.23
TCF4-249ENST00000625716 A0A1W2PQ45 241 aaPredicted RBP7.39□□□□□ -1.23
TCF4-249ENST00000625716 A0A1W2PQY0 241 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 DCDC2CA8MYV0 355 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 SH2B2O14492 632 aaPredicted RBP7.39□□□□□ -1.23
TCF4-249ENST00000625716 ADAMTS4O75173 837 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 ITGB2P05107 769 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 ASGR1P07306 291 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 HMGB1P09429 215 aaKnown RBP7.39□□□□□ -1.23
TCF4-249ENST00000625716 MX2P20592 715 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 CST5P28325 142 aaPredicted RBP7.39□□□□□ -1.23
TCF4-249ENST00000625716 LIFRP42702 1097 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 TROAPQ12815 778 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 USP4Q13107 963 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 STXBP2Q15833 593 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 TRIM60Q495X7 471 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 C1orf53Q5VUE5 145 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 KANK3Q6NY19 840 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 C1orf229Q6ZS94 237 aaPredicted RBP7.39□□□□□ -1.23
TCF4-249ENST00000625716 TLK2Q86UE8 772 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 SAMD3Q8N6K7 520 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms