RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 SKIDA1Q1XH10 827 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 QRICH1Q2TAL8 776 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 CFAP221Q4G0U5 840 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 TSEN2Q8NCE0 465 aaKnown RBP12.4□□□□□ -0.42
VARS2-213ENST00000625423 ADAMTS1Q9UHI8 967 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 A0A087X0T9 212 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 FAM228BP0C875 321 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 ADRA2BP18089 450 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 HOXA10P31260 410 aaPredicted RBP12.4□□□□□ -0.42
VARS2-213ENST00000625423 EPHB4P54760 987 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 MARSP56192 900 aaKnown RBP12.4□□□□□ -0.42
VARS2-213ENST00000625423 ARSHQ5FYA8 562 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 PACSIN1Q9BY11 444 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 TSPYL1Q9H0U9 437 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 KCNMB3Q9NPA1 279 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 PACSIN2Q9UNF0 486 aaPredicted RBP12.4□□□□□ -0.42
VARS2-213ENST00000625423 PCDHA1Q9Y5I3 950 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 TAF1LQ8IZX4 1826 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 POTEFA5A3E0 1075 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 POTEIP0CG38 1075 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 EPS15P42566 896 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 KLHL30Q0D2K2 578 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 NFIAQ12857 509 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 NAB2Q15742 525 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 SLC18A3Q16572 532 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 CDC42EP5Q6NZY7 148 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 POTEGQ6S5H5 508 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 POTEEQ6S8J3 1075 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 COA1Q9GZY4 146 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 TSKSQ9UJT2 592 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 KCNH2Q12809 1159 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 KIAA0753Q2KHM9 967 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 SHROOM1Q2M3G4 852 aaPredicted RBP12.39□□□□□ -0.43
VARS2-213ENST00000625423 ZFPM1Q8IX07 1006 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 CRAMP1Q96RY5 1269 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 ANO3Q9BYT9 981 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 LUC7LQ9NQ29 371 aaKnown RBP12.39□□□□□ -0.43
VARS2-213ENST00000625423 FAM196BA6NMK8 535 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 PPEF1O14829 653 aaPredicted RBP12.39□□□□□ -0.43
VARS2-213ENST00000625423 HLA-DOAP06340 250 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 GLI1P08151 1106 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 CASP5P51878 434 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 SLC12A3P55017 1021 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 RNASE9P60153 205 aaKnown RBP12.39□□□□□ -0.43
VARS2-213ENST00000625423 DDR1Q08345 913 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 EMBQ6PCB8 327 aa12.39□□□□□ -0.43
VARS2-213ENST00000625423 NAP1L4Q99733 375 aaKnown RBP12.39□□□□□ -0.43
VARS2-213ENST00000625423 CETN3O15182 167 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 ACTN1P12814 892 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 NR2F2P24468 414 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 PSMC6P62333 389 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 GANQ9H2C0 597 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 RASSF4Q9H2L5 321 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 DHX36Q9H2U1 1008 aaKnown RBP12.38□□□□□ -0.43
VARS2-213ENST00000625423 AIPL1Q9NZN9 384 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 MYO3BQ8WXR4 1341 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 MYH7BA7E2Y1 1941 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 ESYT3A0FGR9 886 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 ZSCAN5CA6NGD5 496 aaPredicted RBP12.38□□□□□ -0.43
VARS2-213ENST00000625423 ANKRD65E5RJM6 399 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 MEIS1O00470 390 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 PPFIA4O75335 1185 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 USP11P51784 963 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 ASIC2Q16515 512 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 SH3GL2Q99962 352 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 RNF14Q9UBS8 474 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 SUGT1Q9Y2Z0 365 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 SHOX2O60902 331 aaPredicted RBP12.38□□□□□ -0.43
VARS2-213ENST00000625423 CARSP49589 748 aaKnown RBP12.38□□□□□ -0.43
VARS2-213ENST00000625423 SNAP25P60880 206 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 CDC37Q16543 378 aaPredicted RBP12.38□□□□□ -0.43
VARS2-213ENST00000625423 GLE1Q53GS7 698 aaKnown RBP12.38□□□□□ -0.43
VARS2-213ENST00000625423 PRR16Q569H4 304 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 MEI1Q5TIA1 1274 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 APOBEC3HQ6NTF7 200 aaKnown RBP12.38□□□□□ -0.43
VARS2-213ENST00000625423 CATSPER3Q86XQ3 398 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 SP8Q8IXZ3 490 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 FBXO41Q8TF61 875 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 ZC3H12CQ9C0D7 883 aaKnown RBP12.38□□□□□ -0.43
VARS2-213ENST00000625423 DNAJC18Q9H819 358 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 HDAC9Q9UKV0 1011 aa12.38□□□□□ -0.43
VARS2-213ENST00000625423 FRMD3A2A2Y4 597 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 HEXIM1O94992 359 aaKnown RBP12.37□□□□□ -0.43
VARS2-213ENST00000625423 SLC9A1P19634 815 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 TNFRSF8P28908 595 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 PABPC4Q13310 644 aaKnown RBP eCLIP12.37□□□□□ -0.432e-8■■■■□ 24.4
VARS2-213ENST00000625423 KRT27Q7Z3Y8 459 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 ZC3H3Q8IXZ2 948 aaKnown RBP12.37□□□□□ -0.43
VARS2-213ENST00000625423 IFT81Q8WYA0 676 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 CAVIN3Q969G5 261 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 P2RX7Q99572 595 aaKnown RBP12.37□□□□□ -0.43
VARS2-213ENST00000625423 EPB41L5Q9HCM4 733 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 NFU1Q9UMS0 254 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 PCDHGC5Q9Y5F6 944 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 FOCADQ5VW36 1801 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 CYP3A7-CYP3A51PA0A087WV96 503 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 GOLGA8KD6RF30 607 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 MEIS2O14770 477 aa12.37□□□□□ -0.43
VARS2-213ENST00000625423 HSF2BPO75031 334 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms