RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 CNTN2Q02246 1040 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 PNOCQ13519 176 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
LINC00963-220ENST00000625171 ZNF792Q3KQV3 632 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 COBLL1Q53SF7 1204 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 ZNF746Q6NUN9 644 aaPredicted RBP13.18□□□□□ -0.3
LINC00963-220ENST00000625171 C17orf99Q6UX52 265 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 MAMDC4Q6UXC1 1216 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 SV2BQ7L1I2 683 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 LRRC15Q8TF66 581 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 LARP4BQ92615 738 aaKnown RBP13.18□□□□□ -0.3
LINC00963-220ENST00000625171 RAD54LQ92698 747 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 CDK5RAP3Q96JB5 506 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 FGD4Q96M96 766 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 NUDT12Q9BQG2 462 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 EIF2AK1Q9BQI3 630 aaKnown RBP13.18□□□□□ -0.3
LINC00963-220ENST00000625171 RBSNQ9H1K0 784 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 RMND1Q9NWS8 449 aa13.18□□□□□ -0.3
LINC00963-220ENST00000625171 SLC15A5A6NIM6 579 aa13.17□□□□□ -0.3
LINC00963-220ENST00000625171 EML1O00423 815 aa13.17□□□□□ -0.3
LINC00963-220ENST00000625171 FKTNO75072 461 aa13.17□□□□□ -0.3
LINC00963-220ENST00000625171 MYCLP12524 364 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-220ENST00000625171 KCNA2P16389 499 aa13.17□□□□□ -0.3
LINC00963-220ENST00000625171 CCT6AP40227 531 aaKnown RBP13.17□□□□□ -0.3
LINC00963-220ENST00000625171 JAK3P52333 1124 aa13.17□□□□□ -0.3
LINC00963-220ENST00000625171 ITGB3BPQ13352 177 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-220ENST00000625171 GRB14Q14449 540 aa13.17□□□□□ -0.3
LINC00963-220ENST00000625171 SMAP1Q8IYB5 467 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-220ENST00000625171 ANKRD13CQ8N6S4 541 aa13.17□□□□□ -0.3
LINC00963-220ENST00000625171 SYT2Q8N9I0 419 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-220ENST00000625171 PURBQ96QR8 312 aaKnown RBP13.17□□□□□ -0.3
LINC00963-220ENST00000625171 TRIM9Q9C026 710 aa13.17□□□□□ -0.3
LINC00963-220ENST00000625171 PORCNQ9H237 461 aa13.17□□□□□ -0.3
LINC00963-220ENST00000625171 KCND2Q9NZV8 630 aa13.17□□□□□ -0.3
LINC00963-220ENST00000625171 DNM3Q9UQ16 869 aa13.17□□□□□ -0.3
LINC00963-220ENST00000625171 IKBKBO14920 756 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 PEX10O60683 326 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 MED24O75448 989 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 RHOBTB3O94955 611 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 ATG7O95352 703 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 EYA4O95677 639 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 P4HBP07237 508 aaKnown RBP13.16□□□□□ -0.3
LINC00963-220ENST00000625171 HOXC6P09630 235 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 ERCC5P28715 1186 aaPredicted RBP13.16□□□□□ -0.3
LINC00963-220ENST00000625171 PPP1R2P41236 205 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 ZNF165P49910 485 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 IQCB1Q15051 598 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 ECM1Q16610 540 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 RASSF8Q8NHQ8 419 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 GJA10Q969M2 543 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 NACC1Q96RE7 527 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 UNC45AQ9H3U1 944 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 EFCC1Q9HA90 598 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 ZFYVE28Q9HCC9 887 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 SLC5A4Q9NY91 659 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 DACH1Q9UI36 760 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 MAN1B1Q9UKM7 699 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 KIAA1024Q9UPX6 916 aa13.16□□□□□ -0.3
LINC00963-220ENST00000625171 RBM47A0AV96 593 aaKnown RBP13.15□□□□□ -0.3
LINC00963-220ENST00000625171 WDR64B1ANS9 1081 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 KLRC4O43908 158 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 DKC1O60832 514 aaKnown RBP eCLIP13.15□□□□□ -0.31e-14■■■■■ 32.4
LINC00963-220ENST00000625171 ATP9AO75110 1047 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 RPN1P04843 607 aaKnown RBP13.15□□□□□ -0.3
LINC00963-220ENST00000625171 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 BMP6P22004 513 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 AFMP43652 599 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 SLC12A3P55017 1021 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 EHHADHQ08426 723 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 PDE4DQ08499 809 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 MKRN3Q13064 507 aaKnown RBP13.15□□□□□ -0.3
LINC00963-220ENST00000625171 PSMD2Q13200 908 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 NEDD9Q14511 834 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 TAF1CQ15572 869 aaPredicted RBP13.15□□□□□ -0.3
LINC00963-220ENST00000625171 ANO6Q4KMQ2 910 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 NCAPH2Q6IBW4 605 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 FOXR2Q6PJQ5 311 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 GPR142Q7Z601 462 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 PLEKHH3Q7Z736 793 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 C4orf19Q8IY42 314 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 R3HDMLQ9H3Y0 253 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 ZSWIM4Q9H7M6 989 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
LINC00963-220ENST00000625171 DBR1Q9UK59 544 aaKnown RBP13.15□□□□□ -0.3
LINC00963-220ENST00000625171 IVNS1ABPQ9Y6Y0 642 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 LCTP09848 1927 aa13.15□□□□□ -0.3
LINC00963-220ENST00000625171 ADORA2AP29274 412 aa13.14□□□□□ -0.31
LINC00963-220ENST00000625171 CUL4BQ13620 913 aa13.14□□□□□ -0.31
LINC00963-220ENST00000625171 HABP4Q5JVS0 413 aaKnown RBP13.14□□□□□ -0.31
LINC00963-220ENST00000625171 MORN1Q5T089 497 aa13.14□□□□□ -0.31
LINC00963-220ENST00000625171 ZNF658Q5TYW1 1059 aaPredicted RBP13.14□□□□□ -0.31
LINC00963-220ENST00000625171 MIER3Q7Z3K6 550 aa13.14□□□□□ -0.31
LINC00963-220ENST00000625171 KCNK18Q7Z418 384 aa13.14□□□□□ -0.31
LINC00963-220ENST00000625171 USP6NLQ92738 828 aa13.14□□□□□ -0.31
LINC00963-220ENST00000625171 CCDC47Q96A33 483 aaKnown RBP13.14□□□□□ -0.31
LINC00963-220ENST00000625171 DNAJC19Q96DA6 116 aa13.14□□□□□ -0.31
LINC00963-220ENST00000625171 CBX8Q9HC52 389 aa13.14□□□□□ -0.31
LINC00963-220ENST00000625171 TCEAL9Q9UHQ7 104 aa13.14□□□□□ -0.31
LINC00963-220ENST00000625171 PCDHA10Q9Y5I2 948 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms