RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 LRRC41Q15345 812 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 TEX11Q8IYF3 940 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 GLIS3Q8NEA6 775 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 TSG101Q99816 390 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 USP11P51784 963 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 CLNS1AP54105 237 aaKnown RBP15.46■□□□□ 0.07
LDB3-209ENST00000623056 RAPGEF1Q13905 1077 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 ENOX2Q16206 610 aaKnown RBP15.46■□□□□ 0.07
LDB3-209ENST00000623056 KCTD19Q17RG1 926 aaPredicted RBP15.46■□□□□ 0.07
LDB3-209ENST00000623056 ACTRT1Q8TDG2 376 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 FAXDC2Q96IV6 333 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 PBKQ96KB5 322 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 GOLPH3Q9H4A6 298 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 IL17RBQ9NRM6 502 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 ITGB4P16144 1822 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 LAMB1P07942 1786 aa15.46■□□□□ 0.06
LDB3-209ENST00000623056 SPATA31A1Q5TZJ5 1347 aa15.46■□□□□ 0.06
LDB3-209ENST00000623056 F8W031 263 aaPredicted RBP15.45■□□□□ 0.06
LDB3-209ENST00000623056 GNAQP50148 359 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 ELF3P78545 371 aaPredicted RBP15.45■□□□□ 0.06
LDB3-209ENST00000623056 NONOQ15233 471 aaKnown RBP eCLIP15.45■□□□□ 0.06
LDB3-209ENST00000623056 ZNF622Q969S3 477 aaKnown RBP eCLIP15.45■□□□□ 0.06
LDB3-209ENST00000623056 DDX47Q9H0S4 455 aaKnown RBP15.45■□□□□ 0.06
LDB3-209ENST00000623056 LRRC4CQ9HCJ2 640 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 COL4A3BPQ9Y5P4 624 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 BCL9O00512 1426 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 DAPK3O43293 454 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 PPIP5K2O43314 1243 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 ECM2O94769 699 aaPredicted RBP15.45■□□□□ 0.06
LDB3-209ENST00000623056 PAX7P23759 505 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 TFAP4Q01664 338 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 KLHL30Q0D2K2 578 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 SLC4A8Q2Y0W8 1093 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 KRT71Q3SY84 523 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 MSL1Q68DK7 614 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 KRT25Q7Z3Z0 450 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 TMC3Q7Z5M5 1100 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 FAM133AQ8N9E0 248 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 LARP4BQ92615 738 aaKnown RBP15.45■□□□□ 0.06
LDB3-209ENST00000623056 CALR3Q96L12 384 aaKnown RBP15.45■□□□□ 0.06
LDB3-209ENST00000623056 PNMA5Q96PV4 448 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 PSMD1Q99460 953 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 CRNKL1Q9BZJ0 848 aaKnown RBP15.45■□□□□ 0.06
LDB3-209ENST00000623056 RIC8AQ9NPQ8 531 aa15.45■□□□□ 0.06
LDB3-209ENST00000623056 MYH4Q9Y623 1939 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 ATP6V1G2O95670 118 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 TXKP42681 527 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 PTPROQ16827 1216 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 NBPF9Q3BBW0 867 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 NEK8Q86SG6 692 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 DGKHQ86XP1 1220 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 PROM2Q8N271 834 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 CHMP6Q96FZ7 201 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 ARPP21Q9UBL0 812 aaPredicted RBP15.44■□□□□ 0.06
LDB3-209ENST00000623056 STK17AQ9UEE5 414 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 MTMR7Q9Y216 660 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 NOC2LQ9Y3T9 749 aaKnown RBP15.44■□□□□ 0.06
LDB3-209ENST00000623056 NRAPQ86VF7 1730 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 A0A1B0GUA9 196 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 FRMD3A2A2Y4 597 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 BTNL10A8MVZ5 291 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 F8VZ95 297 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 PGRMC1O00264 195 aaKnown RBP15.44■□□□□ 0.06
LDB3-209ENST00000623056 ASIC2Q16515 512 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 MDM1Q8TC05 714 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 NSUN4Q96CB9 384 aaKnown RBP15.44■□□□□ 0.06
LDB3-209ENST00000623056 ACSBG1Q96GR2 724 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 XPO6Q96QU8 1125 aaKnown RBP15.44■□□□□ 0.06
LDB3-209ENST00000623056 NOD2Q9HC29 1040 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 ATP8A2Q9NTI2 1148 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 SWAP70Q9UH65 585 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 MYH7BA7E2Y1 1941 aa15.44■□□□□ 0.06
LDB3-209ENST00000623056 CCDC88AQ3V6T2 1871 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 COL4A1P02462 1669 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 CCT8L1PA6NM43 557 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 PPP1R12BO60237 982 aaPredicted RBP15.43■□□□□ 0.06
LDB3-209ENST00000623056 TRIM37O94972 964 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 ZBTB48P10074 688 aaPredicted RBP15.43■□□□□ 0.06
LDB3-209ENST00000623056 IL6STP40189 918 aaPredicted RBP15.43■□□□□ 0.06
LDB3-209ENST00000623056 FKBP3Q00688 224 aaKnown RBP15.43■□□□□ 0.06
LDB3-209ENST00000623056 DDB1Q16531 1140 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 ZCWPW2Q504Y3 356 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 SBK1Q52WX2 424 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 ERMARDQ5T6L9 678 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 LRRC57Q8N9N7 239 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.43■□□□□ 0.06
LDB3-209ENST00000623056 ZMYND12Q9H0C1 365 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 CNOT10Q9H9A5 744 aaKnown RBP15.43■□□□□ 0.06
LDB3-209ENST00000623056 AIPL1Q9NZN9 384 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 AMACRQ9UHK6 382 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 WNK3Q9BYP7 1800 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 TRAF5O00463 557 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 KRIT1O00522 736 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 RPSAP08865 295 aaKnown RBP15.43■□□□□ 0.06
LDB3-209ENST00000623056 ITGA4P13612 1032 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 GBP2P32456 591 aaPredicted RBP15.43■□□□□ 0.06
LDB3-209ENST00000623056 NAPAP54920 295 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 MECOMQ03112 1051 aa15.43■□□□□ 0.06
LDB3-209ENST00000623056 DHX9Q08211 1270 aaKnown RBP15.43■□□□□ 0.06
LDB3-209ENST00000623056 PPP1R7Q15435 360 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms