RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 NPHP3-ACAD11A0A0J9YXS1 232 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 POTEB3A0JP26 581 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 POTECB2RU33 542 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 USP17L15C9J2P7 530 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 USP17L13C9JLJ4 530 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 USP17L11C9JVI0 530 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 USP17L18D6R9N7 530 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 USP17L22D6RA61 530 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 USP17L17D6RBQ6 530 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 USP17L19D6RCP7 530 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 USP17L20D6RJB6 530 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 AGPSO00116 658 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 MPHOSPH10O00566 681 aaKnown RBP10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 CES2O00748 559 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 MEIS2O14770 477 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 SSBP05455 408 aaKnown RBP eCLIP10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 EEF2P13639 858 aaKnown RBP10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 CAPN2P17655 700 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 RPA1P27694 616 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 ALDH1B1P30837 517 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 CRKP46108 304 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 SCNN1DP51172 638 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 EPHB4P54760 987 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 POLR2FP61218 127 aaKnown RBP10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 ARHGAP4P98171 946 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 ATP2B2Q01814 1243 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 RASSF7Q02833 373 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 USP17L24Q0WX57 530 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 GIT2Q14161 759 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 ASIC2Q16515 512 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 CDC37Q16543 378 aaPredicted RBP10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 SLC18A3Q16572 532 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 BMT2Q1RMZ1 405 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 HAUS3Q68CZ6 603 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 TATDN1Q6P1N9 297 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 NFRKBQ6P4R8 1299 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 EMBQ6PCB8 327 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 USP17L6PQ6QN14 398 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 POTEBQ6S5H4 581 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 SIAH1Q8IUQ4 282 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 SEPT12Q8IYM1 358 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 GOLGA6L1Q8N7Z2 621 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 FAM20AQ96MK3 541 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 MXD3Q9BW11 206 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 TSPYL1Q9H0U9 437 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 FAM204AQ9H8W3 233 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 NLRC4Q9NPP4 1024 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 DMGDHQ9UI17 866 aaKnown RBP10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 PCDHGC5Q9Y5F6 944 aa10.59□□□□□ -0.71
IGHV3-54-201ENST00000622166 COL11A2P13942 1736 aaPredicted RBP10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 COL2A1P02458 1487 aaPredicted RBP10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 A0A0U1RQG5 324 aaPredicted RBP10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 UBAP1LF5GYI3 381 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 PDXKO00764 312 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 NCK2O43639 380 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 SHOX2O60902 331 aaPredicted RBP10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 ZMYND10O75800 440 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 CYP3A4P08684 503 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 SPATA31C1P0DKV0 1188 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 EPB41P11171 864 aaKnown RBP10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 SREBF1P36956 1147 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 NFIAQ12857 509 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 ADAM9Q13443 819 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 EZH2Q15910 746 aaKnown RBP10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 DOK7Q18PE1 504 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 CERKLQ49MI3 558 aaPredicted RBP10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 CFAP221Q4G0U5 840 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 TDRD12Q587J7 1177 aaKnown RBP10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 MEI1Q5TIA1 1274 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 CCDC181Q5TID7 509 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 ALS2CLQ60I27 953 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 BTNL9Q6UXG8 535 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 LRRC31Q6UY01 552 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 PODNQ7Z5L7 613 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 ZFPM1Q8IX07 1006 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 NELFCDQ8IXH7 590 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 GMCL1P1Q8NEA9 526 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 GJA10Q969M2 543 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 LENG9Q96B70 501 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 GMCL1Q96IK5 515 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 P2RX7Q99572 595 aaKnown RBP10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 SH3GL2Q99962 352 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 POLR3CQ9BUI4 534 aaPredicted RBP10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 AMNQ9BXJ7 453 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 GDF3Q9NR23 364 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 TBC1D7Q9P0N9 293 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 STIM2Q9P246 746 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 PI4KBQ9UBF8 816 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 FBXL5Q9UKA1 691 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 SYNPO2Q9UMS6 1093 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 NENFQ9UMX5 172 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 DNM3Q9UQ16 869 aa10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 BZW2Q9Y6E2 419 aaKnown RBP10.58□□□□□ -0.72
IGHV3-54-201ENST00000622166 GOLGA8KD6RF30 607 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 SLC16A3O15427 465 aaKnown RBP10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 CALUO43852 315 aaPredicted RBP10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 OPA1O60313 960 aa10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 AFPP02771 609 aaKnown RBP10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 KRT18P05783 430 aaKnown RBP10.57□□□□□ -0.72
IGHV3-54-201ENST00000622166 GAP43P17677 238 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms