RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 RALGAPA2Q2PPJ7 1873 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 H3BRB1 525 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 TLL1O43897 1013 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 ATP9AO75110 1047 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 PPFIA4O75335 1185 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 CTSHP09668 335 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 MCM5P33992 734 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 GRB10Q13322 594 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 UTP14CQ5TAP6 766 aaKnown RBP13.19□□□□□ -0.3
CPNE3-210ENST00000621245 TYW1BQ6NUM6 668 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 CASC1Q6TDU7 716 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 NFXL1Q6ZNB6 911 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 SAMD3Q8N6K7 520 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 CTCFLQ8NI51 663 aaPredicted RBP13.19□□□□□ -0.3
CPNE3-210ENST00000621245 PHOSPHO2Q8TCD6 241 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
CPNE3-210ENST00000621245 MAP3K14Q99558 947 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 TUT1Q9H6E5 874 aaKnown RBP13.19□□□□□ -0.3
CPNE3-210ENST00000621245 ANO2Q9NQ90 1003 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 MTUS1Q9ULD2 1270 aa13.19□□□□□ -0.3
CPNE3-210ENST00000621245 CNTNAP5Q8WYK1 1306 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 PIK3CDO00329 1044 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 FIBPO43427 364 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 TGFB3P10600 412 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 THPOP40225 353 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 KCNJ6P48051 423 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 KCNQ1P51787 676 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 PCNX4Q63HM2 1172 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 KCNV1Q6PIU1 500 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 METTL7BQ6UX53 244 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 TMTC3Q6ZXV5 915 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 MICU3Q86XE3 530 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 GPIHBP1Q8IV16 184 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 SMARCC2Q8TAQ2 1214 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 ZBTB10Q96DT7 871 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 ASB2Q96Q27 587 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 RNPEPQ9H4A4 650 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 SETD4Q9NVD3 440 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 PKD2L1Q9P0L9 805 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 BRPF3Q9ULD4 1205 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 MYO7AQ13402 2215 aa13.18□□□□□ -0.3
CPNE3-210ENST00000621245 C17orf102A2RUQ5 167 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 NOP56O00567 594 aaKnown RBP13.17□□□□□ -0.3
CPNE3-210ENST00000621245 DPYSL4O14531 572 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 ADAMTS3O15072 1205 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 LGR5O75473 907 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 GJB5O95377 273 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 KCNA2P16389 499 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 ITGB5P18084 799 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 KIF5BP33176 963 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 ADCK5Q3MIX3 580 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 GNPTABQ3T906 1256 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 RUFY4Q6ZNE9 571 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 DBF4BQ8NFT6 615 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 ADAMTS19Q8TE59 1207 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 LMBR1Q8WVP7 490 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 ATXN2LQ8WWM7 1075 aaKnown RBP13.17□□□□□ -0.3
CPNE3-210ENST00000621245 ATP6V0A1Q93050 837 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 PGBD1Q96JS3 809 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 TMEM87BQ96K49 555 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 SEC63Q9UGP8 760 aaKnown RBP13.17□□□□□ -0.3
CPNE3-210ENST00000621245 EVPLQ92817 2033 aa13.17□□□□□ -0.3
CPNE3-210ENST00000621245 LINC01553A4QN01 128 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 RSPH10B2B2RC85 870 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 RSPH10BP0C881 870 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 CPA1P15085 419 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 SMARCA1P28370 1054 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 LIFRP42702 1097 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 ADAM17P78536 824 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 FUT2Q10981 343 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 TRAF1Q13077 416 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 DSG2Q14126 1118 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 PLEKHG4Q58EX7 1191 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 WWC2Q6AWC2 1192 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 HEATR3Q7Z4Q2 680 aa13.16□□□□□ -0.3
CPNE3-210ENST00000621245 ABHD14A-ACY1A0A1B0GW23 586 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 GSTTP1A0A1W2PQM5 241 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 STAM2O75886 525 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 POU3F3P20264 500 aaPredicted RBP13.15□□□□□ -0.3
CPNE3-210ENST00000621245 MARK3P27448 753 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 MRPS5P82675 430 aaKnown RBP13.15□□□□□ -0.3
CPNE3-210ENST00000621245 ARHGAP4P98171 946 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 NEDD9Q14511 834 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 BMP2KLQ5H9B9 411 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 APOA5Q6Q788 366 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 SGMS1Q86VZ5 419 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 FANCBQ8NB91 859 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 CYP2W1Q8TAV3 490 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 CUL5Q93034 780 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 C17orf80Q9BSJ5 609 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 MTA3Q9BTC8 594 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 ZBED2Q9BTP6 218 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 PSTPIP2Q9H939 334 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 UBIAD1Q9Y5Z9 338 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
CPNE3-210ENST00000621245 MYH9P35579 1960 aaKnown RBP13.14□□□□□ -0.31
CPNE3-210ENST00000621245 WDFY4Q6ZS81 3184 aa13.14□□□□□ -0.31
CPNE3-210ENST00000621245 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.14□□□□□ -0.31
CPNE3-210ENST00000621245 KIF28PB7ZC32 967 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms