RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 DTX3Q8N9I9 347 aa7.75□□□□□ -1.17
VPS29-212ENST00000621131 SH3RF2Q8TEC5 729 aa7.75□□□□□ -1.17
VPS29-212ENST00000621131 PTPRN2Q92932 1015 aa7.75□□□□□ -1.17
VPS29-212ENST00000621131 ARMC5Q96C12 935 aa7.75□□□□□ -1.17
VPS29-212ENST00000621131 CDC6Q99741 560 aa7.75□□□□□ -1.17
VPS29-212ENST00000621131 HIRIP3Q9BW71 556 aaPredicted RBP7.75□□□□□ -1.17
VPS29-212ENST00000621131 L2HGDHQ9H9P8 463 aa7.75□□□□□ -1.17
VPS29-212ENST00000621131 NUB1Q9Y5A7 615 aa7.75□□□□□ -1.17
VPS29-212ENST00000621131 B4GALT3O60512 393 aa7.74□□□□□ -1.17
VPS29-212ENST00000621131 CYP1A1P04798 512 aaPredicted RBP7.74□□□□□ -1.17
VPS29-212ENST00000621131 CKMP06732 381 aa7.74□□□□□ -1.17
VPS29-212ENST00000621131 BORAQ6PGQ7 559 aa7.74□□□□□ -1.17
VPS29-212ENST00000621131 MAMDC2Q7Z304 686 aaPredicted RBP7.74□□□□□ -1.17
VPS29-212ENST00000621131 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.74□□□□□ -1.17
VPS29-212ENST00000621131 WRNIP1Q96S55 665 aa7.74□□□□□ -1.17
VPS29-212ENST00000621131 ALG1Q9BT22 464 aa7.74□□□□□ -1.17
VPS29-212ENST00000621131 SSBP3Q9BWW4 388 aaPredicted RBP7.74□□□□□ -1.17
VPS29-212ENST00000621131 TMEM168Q9H0V1 697 aa7.74□□□□□ -1.17
VPS29-212ENST00000621131 ERCC6Q03468 1493 aa7.74□□□□□ -1.17
VPS29-212ENST00000621131 ACOT7O00154 380 aa7.73□□□□□ -1.17
VPS29-212ENST00000621131 AQP7O14520 342 aa7.73□□□□□ -1.17
VPS29-212ENST00000621131 WNT9AO14904 365 aa7.73□□□□□ -1.17
VPS29-212ENST00000621131 SUMO1P63165 101 aaKnown RBP7.73□□□□□ -1.17
VPS29-212ENST00000621131 LONRF2Q1L5Z9 754 aa7.73□□□□□ -1.17
VPS29-212ENST00000621131 PHF19Q5T6S3 580 aa7.73□□□□□ -1.17
VPS29-212ENST00000621131 VASNQ6EMK4 673 aa7.73□□□□□ -1.17
VPS29-212ENST00000621131 KCTD1Q719H9 257 aa7.73□□□□□ -1.17
VPS29-212ENST00000621131 LRP10Q7Z4F1 713 aa7.73□□□□□ -1.17
VPS29-212ENST00000621131 EXOC2Q96KP1 924 aa7.73□□□□□ -1.17
VPS29-212ENST00000621131 DHRS4Q9BTZ2 278 aa7.73□□□□□ -1.17
VPS29-212ENST00000621131 DLL4Q9NR61 685 aa7.73□□□□□ -1.17
VPS29-212ENST00000621131 FAM221BA6H8Z2 402 aa7.72□□□□□ -1.17
VPS29-212ENST00000621131 ENO2P09104 434 aaPredicted RBP7.72□□□□□ -1.17
VPS29-212ENST00000621131 PAK1Q13153 545 aa7.72□□□□□ -1.17
VPS29-212ENST00000621131 RASA3Q14644 834 aa7.72□□□□□ -1.17
VPS29-212ENST00000621131 PKN3Q6P5Z2 889 aa7.72□□□□□ -1.17
VPS29-212ENST00000621131 DBX2Q6ZNG2 339 aa7.72□□□□□ -1.17
VPS29-212ENST00000621131 PCDH19Q8TAB3 1148 aa7.72□□□□□ -1.17
VPS29-212ENST00000621131 PCDHA8Q9Y5H6 950 aa7.72□□□□□ -1.17
VPS29-212ENST00000621131 KDM2BQ8NHM5 1336 aa7.72□□□□□ -1.17
VPS29-212ENST00000621131 MAGEA10P43363 369 aaPredicted RBP7.71□□□□□ -1.18
VPS29-212ENST00000621131 CD276Q5ZPR3 534 aa7.71□□□□□ -1.18
VPS29-212ENST00000621131 TRMT10BQ6PF06 316 aaKnown RBP7.71□□□□□ -1.18
VPS29-212ENST00000621131 GGNQ86UU5 652 aa7.71□□□□□ -1.18
VPS29-212ENST00000621131 KISS1RQ969F8 398 aaPredicted RBP7.71□□□□□ -1.18
VPS29-212ENST00000621131 IPO9Q96P70 1041 aaKnown RBP7.71□□□□□ -1.18
VPS29-212ENST00000621131 FTSJ1Q9UET6 329 aa7.71□□□□□ -1.18
VPS29-212ENST00000621131 ARVCFO00192 962 aa7.7□□□□□ -1.18
VPS29-212ENST00000621131 KLHL18O94889 574 aa7.7□□□□□ -1.18
VPS29-212ENST00000621131 GABREP78334 506 aa7.7□□□□□ -1.18
VPS29-212ENST00000621131 PFKPQ01813 784 aa7.7□□□□□ -1.18
VPS29-212ENST00000621131 SKIDA1Q1XH10 827 aa7.7□□□□□ -1.18
VPS29-212ENST00000621131 KLHL36Q8N4N3 616 aa7.7□□□□□ -1.18
VPS29-212ENST00000621131 NUDT10Q8NFP7 164 aa7.7□□□□□ -1.18
VPS29-212ENST00000621131 NUDT11Q96G61 164 aa7.7□□□□□ -1.18
VPS29-212ENST00000621131 KRTAP17-1Q9BYP8 105 aa7.7□□□□□ -1.18
VPS29-212ENST00000621131 CD244Q9BZW8 370 aa7.7□□□□□ -1.18
VPS29-212ENST00000621131 KNG1P01042 644 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 AMY2AP04746 511 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 CHGBP05060 677 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 AMY2BP19961 511 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 NFATC3Q12968 1075 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 GPR19Q15760 415 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 SMAD2Q15796 467 aaKnown RBP7.69□□□□□ -1.18
VPS29-212ENST00000621131 ZNF827Q17R98 1081 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 ARHGAP36Q6ZRI8 547 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 C16orf59Q7L2K0 433 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 MTDHQ86UE4 582 aaKnown RBP7.69□□□□□ -1.18
VPS29-212ENST00000621131 FBXW5Q969U6 566 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 SAMD11Q96NU1 681 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 DEPDC7Q96QD5 511 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 JAG2Q9Y219 1238 aa7.69□□□□□ -1.18
VPS29-212ENST00000621131 MRPS23Q9Y3D9 190 aaKnown RBP7.69□□□□□ -1.18
VPS29-212ENST00000621131 FAM90A27PA6NNH2 459 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 ZNF839A8K0R7 811 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 IL18BPO95998 194 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 PYGMP11217 842 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 GUCY1A3Q02108 690 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 SURF1Q15526 300 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 LIMS2Q7Z4I7 341 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 OSTM1Q86WC4 334 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 KBTBD2Q8IY47 623 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 MKL1Q969V6 931 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 KRTAP4-5Q9BYR2 181 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 KCND1Q9NSA2 647 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 SMPD4Q9NXE4 827 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 SNTG2Q9NY99 539 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 PPP4R1LQ9P1A2 415 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 ARHGAP20Q9P2F6 1191 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 ZFP69BQ9UJL9 534 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 ADAM29Q9UKF5 820 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 ZDHHC9Q9Y397 364 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 PCDHA9Q9Y5H5 950 aa7.68□□□□□ -1.18
VPS29-212ENST00000621131 BAZ1AQ9NRL2 1556 aaPredicted RBP7.67□□□□□ -1.18
VPS29-212ENST00000621131 LAMTOR5O43504 91 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 PDE6AP16499 860 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 GLRBP48167 497 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 PPP2CBP62714 309 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 PPP2CAP67775 309 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 ADAM17P78536 824 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms