RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 MAGEA1P43355 309 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 ADCY7P51828 1080 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 GRAPQ13588 217 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 SLC10A5Q5PT55 438 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 CNNM4Q6P4Q7 775 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 SND1Q7KZF4 910 aaKnown RBP eCLIP11.75□□□□□ -0.538e-7■■■■□ 21
CDH1-214ENST00000621016 GRAPLQ8TC17 118 aaPredicted RBP11.75□□□□□ -0.53
CDH1-214ENST00000621016 TBC1D5Q92609 795 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 RTFDC1Q9BY42 306 aaPredicted RBP11.75□□□□□ -0.53
CDH1-214ENST00000621016 FGFBP2Q9BYJ0 223 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 CCSER1Q9C0I3 900 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 ZMYND12Q9H0C1 365 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 KIAA1024Q9UPX6 916 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 ZBED6P86452 979 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 GRB10Q13322 594 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 HERC4Q5GLZ8 1057 aaPredicted RBP11.75□□□□□ -0.53
CDH1-214ENST00000621016 TCERG1LQ5VWI1 586 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 SYCP3Q8IZU3 236 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 DHTKD1Q96HY7 919 aaPredicted RBP11.75□□□□□ -0.53
CDH1-214ENST00000621016 ARHGAP20Q9P2F6 1191 aa11.75□□□□□ -0.53
CDH1-214ENST00000621016 PDS5AQ29RF7 1337 aaKnown RBP11.74□□□□□ -0.53
CDH1-214ENST00000621016 DUOX1Q9NRD9 1551 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 FTCDO95954 541 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 KIF11P52732 1056 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 POLR2FP61218 127 aaKnown RBP11.74□□□□□ -0.53
CDH1-214ENST00000621016 CYP4A11Q02928 519 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 SF3B2Q13435 895 aaKnown RBP11.74□□□□□ -0.53
CDH1-214ENST00000621016 RAPGEF1Q13905 1077 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 ECM1Q16610 540 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 MIIPQ5JXC2 388 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 DNAJC7Q99615 494 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 LRRC1Q9BTT6 524 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 POLLQ9UGP5 575 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 DMGDHQ9UI17 866 aaKnown RBP11.74□□□□□ -0.53
CDH1-214ENST00000621016 PCDHAC2Q9Y5I4 1007 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 CHD4Q14839 1912 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 RBM47A0AV96 593 aaKnown RBP11.74□□□□□ -0.53
CDH1-214ENST00000621016 USO1O60763 962 aaKnown RBP11.74□□□□□ -0.53
CDH1-214ENST00000621016 GGCXP38435 758 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 AMPD2Q01433 879 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 SNCBQ16143 134 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 TRAPPC11Q7Z392 1133 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 EPAS1Q99814 870 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 SLC40A1Q9NP59 571 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 SH3GLB2Q9NR46 395 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 PCDHA13Q9Y5I0 950 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 ECM29Q5VYK3 1845 aa11.74□□□□□ -0.53
CDH1-214ENST00000621016 POTEB2H3BUK9 544 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 M0R2N6 131 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 BACH1O14867 736 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 VWA3BQ502W6 1294 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 KCTD16Q68DU8 428 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 BCL9LQ86UU0 1499 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 FAM114A1Q8IWE2 563 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 FAM76AQ8TAV0 307 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 RSRC1Q96IZ7 334 aaKnown RBP11.73□□□□□ -0.53
CDH1-214ENST00000621016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDH1-214ENST00000621016 PCDHA12Q9UN75 941 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 BCS1LQ9Y276 419 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDH1-214ENST00000621016 PAPPAQ13219 1627 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 SFI1A8K8P3 1242 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 SLC1A4P43007 532 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 USP14P54578 494 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 PRR5LQ6MZQ0 368 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 DRAXINQ8NBI3 349 aaPredicted RBP11.73□□□□□ -0.53
CDH1-214ENST00000621016 BLOC1S4Q9NUP1 217 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 USP40Q9NVE5 1235 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 HAUS2Q9NVX0 235 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 DDX25Q9UHL0 483 aaKnown RBP11.73□□□□□ -0.53
CDH1-214ENST00000621016 SALL4Q9UJQ4 1053 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 THRAP3Q9Y2W1 955 aaKnown RBP11.73□□□□□ -0.53
CDH1-214ENST00000621016 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 GOLGA6CA6NDK9 693 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 ZSCAN5CA6NGD5 496 aaPredicted RBP11.73□□□□□ -0.53
CDH1-214ENST00000621016 POTECB2RU33 542 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 ATP6V1G1O75348 118 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 TACC1O75410 805 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 GOLGA6DP0CG33 693 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 FNTAP49354 379 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 SPICE1Q8N0Z3 855 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 MSANTD4Q8NCY6 345 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 NSMCE1Q8WV22 266 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 TRIM4Q9C037 500 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 GBP3Q9H0R5 595 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 BCAS3Q9H6U6 928 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 KCNQ5Q9NR82 932 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 GOLGA6AQ9NYA3 693 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 ADAMTS1Q9UHI8 967 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 L3MBTL1Q9Y468 752 aa11.73□□□□□ -0.53
CDH1-214ENST00000621016 PCNTO95613 3336 aa11.72□□□□□ -0.53
CDH1-214ENST00000621016 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.72□□□□□ -0.53
CDH1-214ENST00000621016 TMCO5BA8MYB1 307 aa11.72□□□□□ -0.53
CDH1-214ENST00000621016 GUCY2FP51841 1108 aa11.72□□□□□ -0.53
CDH1-214ENST00000621016 ADGRF4Q8IZF3 695 aa11.72□□□□□ -0.53
CDH1-214ENST00000621016 NEDD1Q8NHV4 660 aa11.72□□□□□ -0.53
CDH1-214ENST00000621016 STAMBPL1Q96FJ0 436 aa11.72□□□□□ -0.53
CDH1-214ENST00000621016 PNMA5Q96PV4 448 aa11.72□□□□□ -0.53
CDH1-214ENST00000621016 CAPS2Q9BXY5 557 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms