RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 METTL7BQ6UX53 244 aa18.4■□□□□ 0.54
CD40-207ENST00000620709 TMTC3Q6ZXV5 915 aa18.4■□□□□ 0.54
CD40-207ENST00000620709 ATP6V0A1Q93050 837 aa18.4■□□□□ 0.54
CD40-207ENST00000620709 PKD2L1Q9P0L9 805 aa18.4■□□□□ 0.54
CD40-207ENST00000620709 PIK3CDO00329 1044 aa18.39■□□□□ 0.54
CD40-207ENST00000620709 SMIM10L2AP0DMW4 78 aa18.39■□□□□ 0.54
CD40-207ENST00000620709 SMIM10L2BP0DMW5 78 aa18.39■□□□□ 0.54
CD40-207ENST00000620709 WDR5P61964 334 aaKnown RBP18.39■□□□□ 0.54
CD40-207ENST00000620709 GPNMBQ14956 572 aa18.39■□□□□ 0.54
CD40-207ENST00000620709 NECAB1Q8N987 351 aa18.39■□□□□ 0.54
CD40-207ENST00000620709 ARNTL2Q8WYA1 636 aa18.39■□□□□ 0.54
CD40-207ENST00000620709 GTF3C6Q969F1 213 aa18.39■□□□□ 0.54
CD40-207ENST00000620709 ZNF274Q96GC6 653 aaPredicted RBP18.39■□□□□ 0.54
CD40-207ENST00000620709 GPR20Q99678 358 aa18.39■□□□□ 0.54
CD40-207ENST00000620709 TELO2Q9Y4R8 837 aa18.39■□□□□ 0.54
CD40-207ENST00000620709 SPDYE3A6NKU9 549 aa18.39■□□□□ 0.53
CD40-207ENST00000620709 PFKFB2O60825 505 aa18.39■□□□□ 0.53
CD40-207ENST00000620709 PARNO95453 639 aaKnown RBP18.39■□□□□ 0.53
CD40-207ENST00000620709 NUCB2P80303 420 aa18.39■□□□□ 0.53
CD40-207ENST00000620709 ST3GAL1Q11201 340 aa18.39■□□□□ 0.53
CD40-207ENST00000620709 STK3Q13188 491 aa18.39■□□□□ 0.53
CD40-207ENST00000620709 TRIM71Q2Q1W2 868 aaKnown RBP18.39■□□□□ 0.53
CD40-207ENST00000620709 FAM117BQ6P1L5 589 aa18.39■□□□□ 0.53
CD40-207ENST00000620709 TRIM50Q86XT4 487 aa18.39■□□□□ 0.53
CD40-207ENST00000620709 SMC3Q9UQE7 1217 aa18.39■□□□□ 0.53
CD40-207ENST00000620709 TREHO43280 583 aa18.38■□□□□ 0.53
CD40-207ENST00000620709 DEFB103AP81534 67 aa18.38■□□□□ 0.53
CD40-207ENST00000620709 RBL2Q08999 1139 aa18.38■□□□□ 0.53
CD40-207ENST00000620709 IKBKEQ14164 716 aa18.38■□□□□ 0.53
CD40-207ENST00000620709 TCTN1Q2MV58 587 aa18.38■□□□□ 0.53
CD40-207ENST00000620709 XRRA1Q6P2D8 792 aa18.38■□□□□ 0.53
CD40-207ENST00000620709 SETD4Q9NVD3 440 aa18.38■□□□□ 0.53
CD40-207ENST00000620709 ZNF215Q9UL58 517 aaPredicted RBP18.38■□□□□ 0.53
CD40-207ENST00000620709 RSPH10B2B2RC85 870 aa18.37■□□□□ 0.53
CD40-207ENST00000620709 CXCL10P02778 98 aa18.37■□□□□ 0.53
CD40-207ENST00000620709 CTSHP09668 335 aa18.37■□□□□ 0.53
CD40-207ENST00000620709 RSPH10BP0C881 870 aa18.37■□□□□ 0.53
CD40-207ENST00000620709 SKIV2LQ15477 1246 aaKnown RBP18.37■□□□□ 0.53
CD40-207ENST00000620709 RTN1Q16799 776 aa18.37■□□□□ 0.53
CD40-207ENST00000620709 APOA5Q6Q788 366 aa18.37■□□□□ 0.53
CD40-207ENST00000620709 SERINC5Q86VE9 423 aa18.37■□□□□ 0.53
CD40-207ENST00000620709 SGMS1Q86VZ5 419 aa18.37■□□□□ 0.53
CD40-207ENST00000620709 RNPEPQ9H4A4 650 aa18.37■□□□□ 0.53
CD40-207ENST00000620709 PCDHA6Q9UN73 950 aa18.37■□□□□ 0.53
CD40-207ENST00000620709 PCDHA8Q9Y5H6 950 aa18.37■□□□□ 0.53
CD40-207ENST00000620709 KLF18A0A0U1RQI7 1052 aa18.36■□□□□ 0.53
CD40-207ENST00000620709 ZBTB43O43298 467 aa18.36■□□□□ 0.53
CD40-207ENST00000620709 GTPBP6O43824 516 aaPredicted RBP18.36■□□□□ 0.53
CD40-207ENST00000620709 ARHGEF15O94989 841 aa18.36■□□□□ 0.53
CD40-207ENST00000620709 PDIA3P30101 505 aaKnown RBP18.36■□□□□ 0.53
CD40-207ENST00000620709 NAPAP54920 295 aa18.36■□□□□ 0.53
CD40-207ENST00000620709 ARHGAP4P98171 946 aa18.36■□□□□ 0.53
CD40-207ENST00000620709 TAP1Q03518 808 aa18.36■□□□□ 0.53
CD40-207ENST00000620709 MBTPS1Q14703 1052 aa18.36■□□□□ 0.53
CD40-207ENST00000620709 TRAF7Q6Q0C0 670 aa18.36■□□□□ 0.53
CD40-207ENST00000620709 GIMAP8Q8ND71 665 aaPredicted RBP18.36■□□□□ 0.53
CD40-207ENST00000620709 SYMPKQ92797 1274 aaKnown RBP18.36■□□□□ 0.53
CD40-207ENST00000620709 EHMT1Q9H9B1 1298 aa18.36■□□□□ 0.53
CD40-207ENST00000620709 RBM28Q9NW13 759 aaKnown RBP18.36■□□□□ 0.53
CD40-207ENST00000620709 THEGQ9P2T0 379 aa18.36■□□□□ 0.53
CD40-207ENST00000620709 BRPF3Q9ULD4 1205 aa18.36■□□□□ 0.53
CD40-207ENST00000620709 PTPRSQ13332 1948 aa18.36■□□□□ 0.53
CD40-207ENST00000620709 ABHD14A-ACY1A0A1B0GW23 586 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 LCHNA4D1U4 455 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 GOLGA8AA7E2F4 631 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 GOLGA8BA8MQT2 603 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 ATP9AO75110 1047 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 LGR5O75473 907 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 GNAT1P11488 350 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 TCF7P36402 384 aaPredicted RBP18.35■□□□□ 0.53
CD40-207ENST00000620709 SCRN1Q12765 414 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 TJAP1Q5JTD0 557 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 WWC2Q6AWC2 1192 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 GPRASP2Q96D09 838 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 CDHR1Q96JP9 859 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 SENP7Q9BQF6 1050 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 TSPYL2Q9H2G4 693 aaPredicted RBP18.35■□□□□ 0.53
CD40-207ENST00000620709 TRANK1O15050 2925 aa18.35■□□□□ 0.53
CD40-207ENST00000620709 EPOPA6NHQ4 379 aa18.34■□□□□ 0.53
CD40-207ENST00000620709 ITGB5P18084 799 aa18.34■□□□□ 0.53
CD40-207ENST00000620709 MTMR1Q13613 665 aa18.34■□□□□ 0.53
CD40-207ENST00000620709 SPRED2Q7Z698 418 aa18.34■□□□□ 0.53
CD40-207ENST00000620709 PGBD1Q96JS3 809 aa18.34■□□□□ 0.53
CD40-207ENST00000620709 LLPHQ9BRT6 129 aaKnown RBP18.34■□□□□ 0.53
CD40-207ENST00000620709 MTUS1Q9ULD2 1270 aa18.34■□□□□ 0.53
CD40-207ENST00000620709 V9GY48 417 aaPredicted RBP18.34■□□□□ 0.53
CD40-207ENST00000620709 EMSYQ7Z589 1322 aa18.34■□□□□ 0.53
CD40-207ENST00000620709 CNTNAP5Q8WYK1 1306 aa18.34■□□□□ 0.53
CD40-207ENST00000620709 REV3LO60673 3130 aa18.34■□□□□ 0.53
CD40-207ENST00000620709 EFCAB14O75071 495 aa18.33■□□□□ 0.53
CD40-207ENST00000620709 MARK3P27448 753 aa18.33■□□□□ 0.53
CD40-207ENST00000620709 GJB2P29033 226 aa18.33■□□□□ 0.53
CD40-207ENST00000620709 KRT40Q6A162 431 aa18.33■□□□□ 0.53
CD40-207ENST00000620709 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.33■□□□□ 0.53
CD40-207ENST00000620709 DBF4BQ8NFT6 615 aa18.33■□□□□ 0.53
CD40-207ENST00000620709 SPTBN5Q9NRC6 3674 aaKnown RBP18.33■□□□□ 0.53
CD40-207ENST00000620709 KCNA2P16389 499 aa18.33■□□□□ 0.52
CD40-207ENST00000620709 ADCY7P51828 1080 aa18.33■□□□□ 0.52
CD40-207ENST00000620709 MYOCDQ8IZQ8 938 aa18.33■□□□□ 0.52
CD40-207ENST00000620709 GLG1Q92896 1179 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms