RNA–Protein interactions for RNA: ENST00000620424.1

SYNRG-228, Transcript of synergin gamma, humanhuman

TSL 3

Gene SYNRG, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-228ENST00000620424 BLIDQ8IZY5 108 aa10.79□□□□□ -0.68
SYNRG-228ENST00000620424 DAGLBQ8NCG7 672 aa10.79□□□□□ -0.68
SYNRG-228ENST00000620424 GJA10Q969M2 543 aa10.79□□□□□ -0.68
SYNRG-228ENST00000620424 LENG9Q96B70 501 aa10.79□□□□□ -0.68
SYNRG-228ENST00000620424 PHF20Q9BVI0 1012 aa10.79□□□□□ -0.68
SYNRG-228ENST00000620424 A0A1W2PPC1 479 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 H3BRB1 525 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 DHX15O43143 795 aaKnown RBP10.78□□□□□ -0.68
SYNRG-228ENST00000620424 CDKL5O76039 1030 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 SMIM10L2AP0DMW4 78 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 SMIM10L2BP0DMW5 78 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 MARK3P27448 753 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 ACTR2P61160 394 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 PTPN11Q06124 597 aaPredicted RBP10.78□□□□□ -0.68
SYNRG-228ENST00000620424 PRR16Q569H4 304 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 EARS2Q5JPH6 523 aaKnown RBP10.78□□□□□ -0.68
SYNRG-228ENST00000620424 NIPA1Q7RTP0 329 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 C7orf31Q8N865 590 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 BICD2Q8TD16 824 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 TBCKQ8TEA7 893 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 CDHR1Q96JP9 859 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.78□□□□□ -0.681e-7■□□□□ 8.4
SYNRG-228ENST00000620424 SEZ6LQ9BYH1 1024 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 RNPEPQ9H4A4 650 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 TUT1Q9H6E5 874 aaKnown RBP10.78□□□□□ -0.68
SYNRG-228ENST00000620424 JPH1Q9HDC5 661 aaPredicted RBP10.78□□□□□ -0.68
SYNRG-228ENST00000620424 SLC9A2Q9UBY0 812 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 LIMCH1Q9UPQ0 1083 aa10.78□□□□□ -0.68
SYNRG-228ENST00000620424 TDP2O95551 362 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 CIITAP33076 1130 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 INF2Q27J81 1249 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 TRIM71Q2Q1W2 868 aaKnown RBP10.77□□□□□ -0.69
SYNRG-228ENST00000620424 TMEM240Q5SV17 173 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 FAM109BQ6ICB4 259 aaPredicted RBP10.77□□□□□ -0.69
SYNRG-228ENST00000620424 TMEM199Q8N511 208 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 GIMAP8Q8ND71 665 aaPredicted RBP10.77□□□□□ -0.69
SYNRG-228ENST00000620424 SEPT1Q8WYJ6 367 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 ZBTB10Q96DT7 871 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 TBC1D32Q96NH3 1257 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 KATNAL1Q9BW62 490 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 OSBPL7Q9BZF2 842 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 SETD4Q9NVD3 440 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 NOD1Q9Y239 953 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 NFASCO94856 1347 aa10.77□□□□□ -0.69
SYNRG-228ENST00000620424 RANBP2P49792 3224 aaKnown RBP10.77□□□□□ -0.69
SYNRG-228ENST00000620424 SCN5AQ14524 2016 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 IPO5O00410 1097 aaKnown RBP10.76□□□□□ -0.69
SYNRG-228ENST00000620424 MSH4O15457 936 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 MAFGO15525 162 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 TREHO43280 583 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 SUPT20HL2P0C7V6 817 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 HOXC8P31273 242 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 GUCY1B3Q02153 619 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 NR5A1Q13285 461 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 PPIGQ13427 754 aaKnown RBP eCLIP10.76□□□□□ -0.692e-6■□□□□ 9.5
SYNRG-228ENST00000620424 GPNMBQ14956 572 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 TCTN1Q2MV58 587 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 MCTP2Q6DN12 878 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 TRAF7Q6Q0C0 670 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 ZNF365Q70YC5 407 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 DEFB128Q7Z7B8 93 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 TNFRSF25Q93038 417 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 RNPC3Q96LT9 517 aaKnown RBP10.76□□□□□ -0.69
SYNRG-228ENST00000620424 SDF4Q9BRK5 362 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 ZNF577Q9BSK1 485 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 IL23AQ9NPF7 189 aa10.76□□□□□ -0.69
SYNRG-228ENST00000620424 TRIP12Q14669 1992 aaPredicted RBP10.76□□□□□ -0.69
SYNRG-228ENST00000620424 C17orf102A2RUQ5 167 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 WNT7AO00755 349 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 SLC37A4O43826 429 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 LGR5O75473 907 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 ATG7O95352 703 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 IQCF3P0C7M6 154 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 ADAM17P78536 824 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 NONOQ15233 471 aaKnown RBP eCLIP10.75□□□□□ -0.69
SYNRG-228ENST00000620424 RABEP1Q15276 862 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 LRIT3Q3SXY7 679 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 ZNF618Q5T7W0 954 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 KRT40Q6A162 431 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 GALNT17Q6IS24 598 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 ABHD15Q6UXT9 468 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 RUFY4Q6ZNE9 571 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 PIK3AP1Q6ZUJ8 805 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 KRT25Q7Z3Z0 450 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 SERINC5Q86VE9 423 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 CCDC60Q8IWA6 550 aaPredicted RBP10.75□□□□□ -0.69
SYNRG-228ENST00000620424 LMBR1Q8WVP7 490 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 TRAPPC12Q8WVT3 735 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 GLG1Q92896 1179 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 ATP6V0A1Q93050 837 aa10.75□□□□□ -0.69
SYNRG-228ENST00000620424 CXXC1Q9P0U4 656 aaPredicted RBP10.75□□□□□ -0.69
SYNRG-228ENST00000620424 GRXCR1A8MXD5 290 aa10.74□□□□□ -0.69
SYNRG-228ENST00000620424 BTBD18B2RXH4 712 aa10.74□□□□□ -0.69
SYNRG-228ENST00000620424 CKBP12277 381 aa10.74□□□□□ -0.69
SYNRG-228ENST00000620424 ATP4AP20648 1035 aa10.74□□□□□ -0.69
SYNRG-228ENST00000620424 USP11P51784 963 aa10.74□□□□□ -0.69
SYNRG-228ENST00000620424 SETQ01105 290 aaPredicted RBP10.74□□□□□ -0.69
SYNRG-228ENST00000620424 PTK7Q13308 1070 aa10.74□□□□□ -0.69
SYNRG-228ENST00000620424 BFSP2Q13515 415 aa10.74□□□□□ -0.69
SYNRG-228ENST00000620424 MBTPS1Q14703 1052 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms