RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 MYH9P35579 1960 aaKnown RBP28.31■■■□□ 2.12
PMS1-220ENST00000618056 FDPSP14324 419 aaKnown RBP28.31■■■□□ 2.12
PMS1-220ENST00000618056 USP11P51784 963 aa28.31■■■□□ 2.12
PMS1-220ENST00000618056 UTP14CQ5TAP6 766 aaKnown RBP28.31■■■□□ 2.12
PMS1-220ENST00000618056 TRIM50Q86XT4 487 aa28.31■■■□□ 2.12
PMS1-220ENST00000618056 CCDC155Q8N6L0 562 aa28.31■■■□□ 2.12
PMS1-220ENST00000618056 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.31■■■□□ 2.122e-8■□□□□ 9.3
PMS1-220ENST00000618056 RBL2Q08999 1139 aa28.3■■■□□ 2.12
PMS1-220ENST00000618056 PSRC1Q6PGN9 363 aaPredicted RBP28.3■■■□□ 2.12
PMS1-220ENST00000618056 NSUN7Q8NE18 718 aaKnown RBP28.3■■■□□ 2.12
PMS1-220ENST00000618056 EDIL3O43854 480 aa28.29■■■□□ 2.12
PMS1-220ENST00000618056 SMIM10L2AP0DMW4 78 aa28.29■■■□□ 2.12
PMS1-220ENST00000618056 SMIM10L2BP0DMW5 78 aa28.29■■■□□ 2.12
PMS1-220ENST00000618056 PTK7Q13308 1070 aa28.29■■■□□ 2.12
PMS1-220ENST00000618056 TMEM240Q5SV17 173 aa28.29■■■□□ 2.12
PMS1-220ENST00000618056 GPR153Q6NV75 609 aa28.29■■■□□ 2.12
PMS1-220ENST00000618056 DHX38Q92620 1227 aaKnown RBP28.29■■■□□ 2.12
PMS1-220ENST00000618056 LRCH3Q96II8 777 aa28.29■■■□□ 2.12
PMS1-220ENST00000618056 UPF2Q9HAU5 1272 aaKnown RBP28.29■■■□□ 2.12
PMS1-220ENST00000618056 KCNJ14Q9UNX9 436 aa28.29■■■□□ 2.12
PMS1-220ENST00000618056 EMSYQ7Z589 1322 aa28.29■■■□□ 2.12
PMS1-220ENST00000618056 LGR5O75473 907 aa28.28■■■□□ 2.12
PMS1-220ENST00000618056 SLC34A2O95436 690 aa28.28■■■□□ 2.12
PMS1-220ENST00000618056 HIC1Q14526 733 aa28.28■■■□□ 2.12
PMS1-220ENST00000618056 RETREG2Q8NC44 543 aa28.28■■■□□ 2.12
PMS1-220ENST00000618056 AFAP1L1Q8TED9 768 aa28.28■■■□□ 2.12
PMS1-220ENST00000618056 SCLYQ96I15 445 aa28.28■■■□□ 2.12
PMS1-220ENST00000618056 RNPC3Q96LT9 517 aaKnown RBP28.28■■■□□ 2.12
PMS1-220ENST00000618056 C17orf102A2RUQ5 167 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 IPO5O00410 1097 aaKnown RBP28.27■■■□□ 2.12
PMS1-220ENST00000618056 DHX15O43143 795 aaKnown RBP28.27■■■□□ 2.12
PMS1-220ENST00000618056 ACTR2P61160 394 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 ST3GAL1Q11201 340 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 RPUSD2Q8IZ73 545 aaKnown RBP28.27■■■□□ 2.12
PMS1-220ENST00000618056 TBCKQ8TEA7 893 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 LENG9Q96B70 501 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 RNPEPQ9H4A4 650 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 SMARCAD1Q9H4L7 1026 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 ERAP1Q9NZ08 941 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 DTNBO60941 627 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 ATG7O95352 703 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 IQCF3P0C7M6 154 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 ACRP10323 421 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 RFC2P35250 354 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 ZNF200P98182 395 aaPredicted RBP28.27■■■□□ 2.12
PMS1-220ENST00000618056 PRR16Q569H4 304 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 ZNF365Q70YC5 407 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 KRT25Q7Z3Z0 450 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 SERINC5Q86VE9 423 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 IL27Q8NEV9 243 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 VWCEQ96DN2 955 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 ZSCAN31Q96LW9 406 aaPredicted RBP28.27■■■□□ 2.12
PMS1-220ENST00000618056 TBC1D22BQ9NU19 505 aa28.27■■■□□ 2.12
PMS1-220ENST00000618056 PFKMP08237 780 aa28.26■■■□□ 2.11
PMS1-220ENST00000618056 RABEP1Q15276 862 aa28.26■■■□□ 2.11
PMS1-220ENST00000618056 RASIP1Q5U651 963 aa28.26■■■□□ 2.11
PMS1-220ENST00000618056 GLG1Q92896 1179 aa28.26■■■□□ 2.11
PMS1-220ENST00000618056 PCYT2Q99447 389 aa28.26■■■□□ 2.11
PMS1-220ENST00000618056 ZNF577Q9BSK1 485 aa28.26■■■□□ 2.11
PMS1-220ENST00000618056 GNAT1P11488 350 aa28.25■■■□□ 2.11
PMS1-220ENST00000618056 NONOQ15233 471 aaKnown RBP eCLIP28.25■■■□□ 2.11
PMS1-220ENST00000618056 TRIM71Q2Q1W2 868 aaKnown RBP28.25■■■□□ 2.11
PMS1-220ENST00000618056 ATP6V0A1Q93050 837 aa28.25■■■□□ 2.11
PMS1-220ENST00000618056 GJB4Q9NTQ9 266 aa28.25■■■□□ 2.11
PMS1-220ENST00000618056 NRCAMQ92823 1304 aa28.25■■■□□ 2.11
PMS1-220ENST00000618056 JAK2O60674 1132 aa28.24■■■□□ 2.11
PMS1-220ENST00000618056 CCNE2O96020 404 aa28.24■■■□□ 2.11
PMS1-220ENST00000618056 SELPP16109 830 aa28.24■■■□□ 2.11
PMS1-220ENST00000618056 ADAM17P78536 824 aa28.24■■■□□ 2.11
PMS1-220ENST00000618056 MOXD1Q6UVY6 613 aa28.24■■■□□ 2.11
PMS1-220ENST00000618056 HERVK_113Q902F9 699 aa28.24■■■□□ 2.11
PMS1-220ENST00000618056 AZI2Q9H6S1 392 aa28.24■■■□□ 2.11
PMS1-220ENST00000618056 SH2B1Q9NRF2 756 aaPredicted RBP28.24■■■□□ 2.11
PMS1-220ENST00000618056 CYP3A7-CYP3A51PA0A087WV96 503 aa28.23■■■□□ 2.11
PMS1-220ENST00000618056 FGBP02675 491 aa28.23■■■□□ 2.11
PMS1-220ENST00000618056 CKBP12277 381 aa28.23■■■□□ 2.11
PMS1-220ENST00000618056 CYP3A7P24462 503 aa28.23■■■□□ 2.11
PMS1-220ENST00000618056 PLPPR4Q7Z2D5 763 aa28.23■■■□□ 2.11
PMS1-220ENST00000618056 WNT8BQ93098 351 aa28.23■■■□□ 2.11
PMS1-220ENST00000618056 LLPHQ9BRT6 129 aaKnown RBP28.23■■■□□ 2.11
PMS1-220ENST00000618056 SETD4Q9NVD3 440 aa28.23■■■□□ 2.11
PMS1-220ENST00000618056 IGKV6D-21A0A0A0MT36 114 aa28.22■■■□□ 2.11
PMS1-220ENST00000618056 TREHO43280 583 aa28.22■■■□□ 2.11
PMS1-220ENST00000618056 PARNO95453 639 aaKnown RBP28.22■■■□□ 2.11
PMS1-220ENST00000618056 Q4G0T1 1027 aa28.22■■■□□ 2.11
PMS1-220ENST00000618056 ABHD15Q6UXT9 468 aa28.22■■■□□ 2.11
PMS1-220ENST00000618056 LRRC8DQ7L1W4 858 aa28.22■■■□□ 2.11
PMS1-220ENST00000618056 LMBR1Q8WVP7 490 aa28.22■■■□□ 2.11
PMS1-220ENST00000618056 CCDC194A0A1B0GVG4 234 aa28.21■■■□□ 2.11
PMS1-220ENST00000618056 DDX39AO00148 427 aaKnown RBP28.21■■■□□ 2.11
PMS1-220ENST00000618056 SMAD3P84022 425 aaKnown RBP28.21■■■□□ 2.11
PMS1-220ENST00000618056 ZNF746Q6NUN9 644 aaPredicted RBP28.21■■■□□ 2.11
PMS1-220ENST00000618056 CCDC83Q8IWF9 413 aa28.21■■■□□ 2.11
PMS1-220ENST00000618056 MBOAT7Q96N66 472 aa28.21■■■□□ 2.11
PMS1-220ENST00000618056 MTIF3Q9H2K0 278 aaKnown RBP28.21■■■□□ 2.11
PMS1-220ENST00000618056 MSH4O15457 936 aa28.21■■■□□ 2.11
PMS1-220ENST00000618056 MARK3P27448 753 aa28.21■■■□□ 2.11
PMS1-220ENST00000618056 SLC26A2P50443 739 aa28.21■■■□□ 2.11
PMS1-220ENST00000618056 STAT5BP51692 787 aa28.21■■■□□ 2.11
PMS1-220ENST00000618056 KRT76Q01546 638 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms