RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 EMSYQ7Z589 1322 aa28.78■■■□□ 2.2
VEGFA-228ENST00000617771 TREHO43280 583 aa28.78■■■□□ 2.2
VEGFA-228ENST00000617771 PDIA3P30101 505 aaKnown RBP28.78■■■□□ 2.2
VEGFA-228ENST00000617771 MCTP2Q6DN12 878 aa28.78■■■□□ 2.2
VEGFA-228ENST00000617771 TRAF7Q6Q0C0 670 aa28.78■■■□□ 2.2
VEGFA-228ENST00000617771 PHKBQ93100 1093 aa28.78■■■□□ 2.2
VEGFA-228ENST00000617771 GAS2L1Q99501 681 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-228ENST00000617771 RNF26Q9BY78 433 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-228ENST00000617771 ZMYND12Q9H0C1 365 aa28.78■■■□□ 2.2
VEGFA-228ENST00000617771 JPH1Q9HDC5 661 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-228ENST00000617771 SETD4Q9NVD3 440 aa28.78■■■□□ 2.2
VEGFA-228ENST00000617771 CDH23Q9H251 3354 aa28.77■■■□□ 2.2
VEGFA-228ENST00000617771 GSTTP1A0A1W2PQM5 241 aa28.77■■■□□ 2.2
VEGFA-228ENST00000617771 CAND2O75155 1236 aa28.77■■■□□ 2.2
VEGFA-228ENST00000617771 ZNF76P36508 570 aa28.77■■■□□ 2.2
VEGFA-228ENST00000617771 PKN1Q16512 942 aa28.77■■■□□ 2.2
VEGFA-228ENST00000617771 PPP2R2DQ66LE6 453 aa28.77■■■□□ 2.2
VEGFA-228ENST00000617771 SDF4Q9BRK5 362 aa28.77■■■□□ 2.2
VEGFA-228ENST00000617771 ERAP1Q9NZ08 941 aa28.77■■■□□ 2.2
VEGFA-228ENST00000617771 SLC9A2Q9UBY0 812 aa28.77■■■□□ 2.2
VEGFA-228ENST00000617771 NFASCO94856 1347 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 NRCAMQ92823 1304 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 RSPH10B2B2RC85 870 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 KIF28PB7ZC32 967 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 RSPH10BP0C881 870 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 IFNAR1P17181 557 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 GNA11P29992 359 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 CCT2P78371 535 aaKnown RBP28.76■■■□□ 2.19
VEGFA-228ENST00000617771 ARHGAP4P98171 946 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 TOB2Q14106 344 aaPredicted RBP28.76■■■□□ 2.19
VEGFA-228ENST00000617771 NTRK3Q16288 839 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 JAKMIP3Q5VZ66 844 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 CYP2W1Q8TAV3 490 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 GLG1Q92896 1179 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 SLC26A6Q9BXS9 759 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 SMARCAD1Q9H4L7 1026 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 PRDM12Q9H4Q4 367 aa28.76■■■□□ 2.19
VEGFA-228ENST00000617771 ABHD14A-ACY1A0A1B0GW23 586 aa28.75■■■□□ 2.19
VEGFA-228ENST00000617771 EFCAB14O75071 495 aa28.75■■■□□ 2.19
VEGFA-228ENST00000617771 CENPBP07199 599 aaPredicted RBP28.75■■■□□ 2.19
VEGFA-228ENST00000617771 MYOGP15173 224 aa28.75■■■□□ 2.19
VEGFA-228ENST00000617771 WDR5P61964 334 aaKnown RBP28.75■■■□□ 2.19
VEGFA-228ENST00000617771 HERC6Q8IVU3 1022 aa28.75■■■□□ 2.19
VEGFA-228ENST00000617771 REXO1Q8N1G1 1221 aaKnown RBP28.75■■■□□ 2.19
VEGFA-228ENST00000617771 CCDC148Q8NFR7 591 aa28.75■■■□□ 2.19
VEGFA-228ENST00000617771 LMBR1Q8WVP7 490 aa28.75■■■□□ 2.19
VEGFA-228ENST00000617771 GBF1Q92538 1859 aa28.74■■■□□ 2.19
VEGFA-228ENST00000617771 MEIS1O00470 390 aa28.74■■■□□ 2.19
VEGFA-228ENST00000617771 LGR5O75473 907 aa28.74■■■□□ 2.19
VEGFA-228ENST00000617771 ARP10275 920 aa28.74■■■□□ 2.19
VEGFA-228ENST00000617771 IKBKEQ14164 716 aa28.74■■■□□ 2.19
VEGFA-228ENST00000617771 NIPA1Q7RTP0 329 aa28.74■■■□□ 2.19
VEGFA-228ENST00000617771 BICD2Q8TD16 824 aa28.74■■■□□ 2.19
VEGFA-228ENST00000617771 NCOA5Q9HCD5 579 aaKnown RBP28.74■■■□□ 2.19
VEGFA-228ENST00000617771 AGO4Q9HCK5 861 aaKnown RBP28.74■■■□□ 2.19
VEGFA-228ENST00000617771 MARK3P27448 753 aa28.73■■■□□ 2.19
VEGFA-228ENST00000617771 ADAM17P78536 824 aa28.73■■■□□ 2.19
VEGFA-228ENST00000617771 MBTPS1Q14703 1052 aa28.73■■■□□ 2.19
VEGFA-228ENST00000617771 ZNF274Q96GC6 653 aaPredicted RBP28.73■■■□□ 2.19
VEGFA-228ENST00000617771 UPF3BQ9BZI7 483 aaKnown RBP28.73■■■□□ 2.19
VEGFA-228ENST00000617771 AZI2Q9H6S1 392 aa28.73■■■□□ 2.19
VEGFA-228ENST00000617771 CA3P07451 260 aa28.72■■■□□ 2.19
VEGFA-228ENST00000617771 PPFIA1Q13136 1202 aa28.72■■■□□ 2.19
VEGFA-228ENST00000617771 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.72■■■□□ 2.193e-13■■□□□ 13.7
VEGFA-228ENST00000617771 TRIM22Q8IYM9 498 aa28.72■■■□□ 2.19
VEGFA-228ENST00000617771 TET1Q8NFU7 2136 aa28.72■■■□□ 2.19
VEGFA-228ENST00000617771 PPFIA3O75145 1194 aa28.71■■■□□ 2.19
VEGFA-228ENST00000617771 CYP3A4P08684 503 aa28.71■■■□□ 2.19
VEGFA-228ENST00000617771 PDRG1Q9NUG6 133 aa28.71■■■□□ 2.19
VEGFA-228ENST00000617771 CPLX1O14810 134 aa28.7■■■□□ 2.18
VEGFA-228ENST00000617771 TLL1O43897 1013 aa28.7■■■□□ 2.18
VEGFA-228ENST00000617771 CTSHP09668 335 aa28.7■■■□□ 2.18
VEGFA-228ENST00000617771 ACTR2P61160 394 aa28.7■■■□□ 2.18
VEGFA-228ENST00000617771 SSRP1Q08945 709 aaKnown RBP28.7■■■□□ 2.18
VEGFA-228ENST00000617771 ITGB3BPQ13352 177 aaPredicted RBP28.7■■■□□ 2.18
VEGFA-228ENST00000617771 GRIK4Q16099 956 aa28.7■■■□□ 2.18
VEGFA-228ENST00000617771 TAF2Q6P1X5 1199 aa28.7■■■□□ 2.18
VEGFA-228ENST00000617771 PLA2G4DQ86XP0 818 aa28.7■■■□□ 2.18
VEGFA-228ENST00000617771 TNPO1Q92973 898 aaKnown RBP28.7■■■□□ 2.18
VEGFA-228ENST00000617771 DEFB103AP81534 67 aa28.69■■■□□ 2.18
VEGFA-228ENST00000617771 TCTN1Q2MV58 587 aa28.69■■■□□ 2.18
VEGFA-228ENST00000617771 CPLX2Q6PUV4 134 aaKnown RBP28.69■■■□□ 2.18
VEGFA-228ENST00000617771 DBF4BQ8NFT6 615 aa28.69■■■□□ 2.18
VEGFA-228ENST00000617771 CRYGNQ8WXF5 182 aa28.69■■■□□ 2.18
VEGFA-228ENST00000617771 ZBED2Q9BTP6 218 aa28.69■■■□□ 2.18
VEGFA-228ENST00000617771 SH3GLB2Q9NR46 395 aa28.69■■■□□ 2.18
VEGFA-228ENST00000617771 VPS54Q9P1Q0 977 aa28.69■■■□□ 2.18
VEGFA-228ENST00000617771 FAM86B1E9PN63 330 aa28.68■■■□□ 2.18
VEGFA-228ENST00000617771 FAM86B2P0C5J1 330 aa28.68■■■□□ 2.18
VEGFA-228ENST00000617771 SETQ01105 290 aaPredicted RBP28.68■■■□□ 2.18
VEGFA-228ENST00000617771 PLEKHG4Q58EX7 1191 aa28.68■■■□□ 2.18
VEGFA-228ENST00000617771 RSPH3Q86UC2 560 aa28.68■■■□□ 2.18
VEGFA-228ENST00000617771 PCYT2Q99447 389 aa28.68■■■□□ 2.18
VEGFA-228ENST00000617771 TUBE1Q9UJT0 475 aa28.68■■■□□ 2.18
VEGFA-228ENST00000617771 RRN3P2A6NIE6 340 aa28.67■■■□□ 2.18
VEGFA-228ENST00000617771 PLPPR4Q7Z2D5 763 aa28.67■■■□□ 2.18
VEGFA-228ENST00000617771 RPAINQ86UA6 219 aa28.67■■■□□ 2.18
VEGFA-228ENST00000617771 SEPT8Q92599 483 aa28.67■■■□□ 2.18
VEGFA-228ENST00000617771 IGLV3-22A0A075B6J6 115 aa28.66■■■□□ 2.18
VEGFA-228ENST00000617771 ADAMTS3O15072 1205 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms