RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 SF3B2Q13435 895 aaKnown RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 DGKZQ13574 1117 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 CUL3Q13618 768 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 RNF187Q5TA31 235 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 NEDD1Q8NHV4 660 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 MIPOL1Q8TD10 442 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 RUFY1Q96T51 708 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 DNAJC18Q9H819 358 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 N6AMT1Q9Y5N5 214 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 FAM170AA1A519 330 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 DYTNA2CJ06 578 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 PALM3A6NDB9 673 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 POTEMA6NI47 508 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 GOLGA6L10A6NI86 522 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 EIF4E1BA6NMX2 242 aaKnown RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 SMIM24O75264 130 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 RASSF9O75901 435 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 TDP2O95551 362 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 TOP1P11387 765 aaKnown RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 MYCLP1P12525 358 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 EEF2P13639 858 aaKnown RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 DPEP1P16444 411 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 UBA7P41226 1012 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 JAG1P78504 1218 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 BRD3Q15059 726 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 CERKLQ49MI3 558 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 PRAMEF18Q5VWM3 479 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 RRAGBQ5VZM2 374 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 CCDC80Q76M96 950 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 PIAS4Q8N2W9 510 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 NSMCE1Q8WV22 266 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 TNFRSF25Q93038 417 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 SPAG5Q96R06 1193 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 CSRNP1Q96S65 589 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 CTDP1Q9Y5B0 961 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 FANCGO15287 622 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 ZSCAN12O43309 604 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 GH2P01242 217 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 CCDC175P0C221 793 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 LINGO3P0C6S8 592 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 FERP16591 822 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 SLC1A4P43007 532 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 CLCN2P51788 898 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 INHBCP55103 352 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 CACNB1Q02641 598 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 DPYDQ12882 1025 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 MYO1EQ12965 1108 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 DTHD1Q6ZMT9 781 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 SH3BP5LQ7L8J4 393 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 DYMQ7RTS9 669 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 ADGRF4Q8IZF3 695 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 RABGGTAQ92696 567 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 TBC1D31Q96DN5 1066 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 CLIP3Q96DZ5 547 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 HSD3B7Q9H2F3 369 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 ABCB6Q9NP58 842 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 BARHL2Q9NY43 387 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 FAM198AQ9UFP1 575 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 TPX2Q9ULW0 747 aaKnown RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 ZNF831Q5JPB2 1677 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 PDS5AQ29RF7 1337 aaKnown RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 MYH4Q9Y623 1939 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 PSDA5PKW4 1024 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-214ENST00000617767 TEX33O43247 280 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 ABL1P00519 1130 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 PCP11498 1178 aaKnown RBP6.1□□□□□ -1.43
CPNE4-214ENST00000617767 HOXA13P31271 388 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-214ENST00000617767 ECE1P42892 770 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 IRAK1P51617 712 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 MDM2Q00987 491 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-214ENST00000617767 MTHFD1LQ6UB35 978 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 MED15Q96RN5 788 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.1□□□□□ -1.43
CPNE4-214ENST00000617767 UBE2OQ9C0C9 1292 aaKnown RBP6.1□□□□□ -1.43
CPNE4-214ENST00000617767 BRD8Q9H0E9 1235 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 VPS16Q9H269 839 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 ZNF510Q9Y2H8 683 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 GAKO14976 1311 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 EIF3FO00303 357 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-214ENST00000617767 PSMD14O00487 310 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 SLC37A4O43826 429 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 PPP1R11O60927 126 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-214ENST00000617767 TTLL1O95922 423 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 LMNB1P20700 586 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 TXLNAP40222 546 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 ATP2C1P98194 919 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-214ENST00000617767 RRP1BQ14684 758 aaKnown RBP6.1□□□□□ -1.43
CPNE4-214ENST00000617767 CASP8Q14790 479 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 PPP2R5BQ15173 497 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 ZNF394Q53GI3 561 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 DACT2Q5SW24 774 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 PPP1R15BQ5SWA1 713 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 ARMCX5Q6P1M9 558 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 RSRC2Q7L4I2 434 aaKnown RBP6.1□□□□□ -1.43
CPNE4-214ENST00000617767 FCHSD1Q86WN1 690 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 REXO1Q8N1G1 1221 aaKnown RBP6.1□□□□□ -1.43
CPNE4-214ENST00000617767 LRRC15Q8TF66 581 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 SPIRE2Q8WWL2 714 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 HOOK2Q96ED9 719 aa6.1□□□□□ -1.43
CPNE4-214ENST00000617767 TMEM39BQ9GZU3 492 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms