RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 ITPKAP23677 461 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 IARSP41252 1262 aaKnown RBP9.72□□□□□ -0.85
CCL3-205ENST00000613928 GRIA4P48058 902 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 NT5C2P49902 561 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 UBE2HP62256 183 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 TFAP4Q01664 338 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 IFIT1BQ5T764 474 aaKnown RBP9.72□□□□□ -0.85
CCL3-205ENST00000613928 RCSD1Q6JBY9 416 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 APOBEC3HQ6NTF7 200 aaKnown RBP9.72□□□□□ -0.85
CCL3-205ENST00000613928 IQCA1Q86XH1 822 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 SVOPQ8N4V2 548 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 SLC44A5Q8NCS7 719 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 NUP133Q8WUM0 1156 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 ANKS1AQ92625 1134 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 ALG1Q9BT22 464 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 MRIQ9BWK5 157 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 ADAM19Q9H013 955 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 PRDM6Q9NQX0 595 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 IL17RBQ9NRM6 502 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 USP40Q9NVE5 1235 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 TRIM33Q9UPN9 1127 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 ELP1O95163 1332 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 MYH15Q9Y2K3 1946 aa9.72□□□□□ -0.85
CCL3-205ENST00000613928 TSPY2A6NKD2 308 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 METTL12A8MUP2 240 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 KIF28PB7ZC32 967 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 PPIP5K2O43314 1243 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 WIPF1O43516 503 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 WDHD1O75717 1129 aaPredicted RBP9.71□□□□□ -0.86
CCL3-205ENST00000613928 DDAH1O94760 285 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 CTSHP09668 335 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 GUCY1A2P33402 732 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 CRKP46108 304 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 CDK8P49336 464 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 CTCFP49711 727 aaPredicted RBP9.71□□□□□ -0.86
CCL3-205ENST00000613928 ZNF445P59923 1031 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 SSRP1Q08945 709 aaKnown RBP9.71□□□□□ -0.86
CCL3-205ENST00000613928 TROAPQ12815 778 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 ZSCAN23Q3MJ62 389 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 CCDC93Q567U6 631 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 KRT40Q6A162 431 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 GDF6Q6KF10 455 aaPredicted RBP9.71□□□□□ -0.86
CCL3-205ENST00000613928 CDC42EP5Q6NZY7 148 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 C16orf86Q6ZW13 317 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 AMOTL1Q8IY63 956 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 CRACR2BQ8N4Y2 399 aaPredicted RBP9.71□□□□□ -0.86
CCL3-205ENST00000613928 C3orf58Q8NDZ4 430 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 WHAMMQ8TF30 809 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 LEO1Q8WVC0 666 aaPredicted RBP9.71□□□□□ -0.86
CCL3-205ENST00000613928 TEKT1Q969V4 418 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 SLC26A6Q9BXS9 759 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 DDX4Q9NQI0 724 aaKnown RBP9.71□□□□□ -0.86
CCL3-205ENST00000613928 PRDM10Q9NQV6 1147 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 TCP11L1Q9NUJ3 509 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 PCDHAC2Q9Y5I4 1007 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 MYH1P12882 1939 aa9.71□□□□□ -0.86
CCL3-205ENST00000613928 DDNO94850 711 aaPredicted RBP9.7□□□□□ -0.86
CCL3-205ENST00000613928 LBX1P52954 281 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 HDLBPQ00341 1268 aaKnown RBP9.7□□□□□ -0.86
CCL3-205ENST00000613928 KIF23Q02241 960 aaPredicted RBP9.7□□□□□ -0.86
CCL3-205ENST00000613928 PICALMQ13492 652 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 PPP2R5BQ15173 497 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 SPRED3Q2MJR0 410 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 ZNF385CQ66K41 422 aaPredicted RBP9.7□□□□□ -0.86
CCL3-205ENST00000613928 CATIPQ7Z7H3 387 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 DGKHQ86XP1 1220 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 KIAA0825Q8IV33 1275 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 RTKN2Q8IZC4 609 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 ZNF444Q8N0Y2 327 aaPredicted RBP9.7□□□□□ -0.86
CCL3-205ENST00000613928 SPATA32Q96LK8 384 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 ZDHHC15Q96MV8 337 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 USP28Q96RU2 1077 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 PSMD1Q99460 953 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 SCAND2PQ9GZW5 306 aaPredicted RBP9.7□□□□□ -0.86
CCL3-205ENST00000613928 LACRTQ9GZZ8 138 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 MKNK2Q9HBH9 465 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 RCOR1Q9UKL0 485 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 COL4A5P29400 1685 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 SCN4AP35499 1836 aa9.7□□□□□ -0.86
CCL3-205ENST00000613928 CCDC196A0A1B0GTZ2 297 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 GOLGA6L3A6NEY3 463 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 SCAMP3O14828 347 aaKnown RBP9.69□□□□□ -0.86
CCL3-205ENST00000613928 PLEKHA8P1O95397 391 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 CALM1P0DP23 149 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 CALM2P0DP24 149 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 CALM3P0DP25 149 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 ST13P50502 369 aaKnown RBP9.69□□□□□ -0.86
CCL3-205ENST00000613928 AFF1P51825 1210 aaKnown RBP9.69□□□□□ -0.86
CCL3-205ENST00000613928 GABPAQ06546 454 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 NFIAQ12857 509 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 TAF1CQ15572 869 aaPredicted RBP9.69□□□□□ -0.86
CCL3-205ENST00000613928 PKN1Q16512 942 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 RPS26P11Q5JNZ5 115 aaPredicted RBP9.69□□□□□ -0.86
CCL3-205ENST00000613928 ATL3Q6DD88 541 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 TMTC3Q6ZXV5 915 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 NEDD1Q8NHV4 660 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 SHISA4Q96DD7 197 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 PGBD1Q96JS3 809 aa9.69□□□□□ -0.86
CCL3-205ENST00000613928 ZNF396Q96N95 335 aaPredicted RBP9.69□□□□□ -0.86
CCL3-205ENST00000613928 RNF26Q9BY78 433 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms