RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 KRT18P05783 430 aaKnown RBP13.21□□□□□ -0.3
TUBD1-216ENST00000613721 STAT3P40763 770 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 USP14P54578 494 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 KLRC3Q07444 240 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 IKQ13123 557 aaPredicted RBP13.21□□□□□ -0.3
TUBD1-216ENST00000613721 ABCB5Q2M3G0 1257 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 HERC4Q5GLZ8 1057 aaPredicted RBP13.21□□□□□ -0.3
TUBD1-216ENST00000613721 ARHGAP27Q6ZUM4 889 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 NELFCDQ8IXH7 590 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 MSL3Q8N5Y2 521 aaKnown RBP13.21□□□□□ -0.3
TUBD1-216ENST00000613721 GMCL1P1Q8NEA9 526 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 CAGE1Q8TC20 777 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 SMCR8Q8TEV9 937 aaPredicted RBP13.21□□□□□ -0.3
TUBD1-216ENST00000613721 CRYGNQ8WXF5 182 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 VEZTQ9HBM0 779 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 JADE2Q9NQC1 790 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 PCDHA2Q9Y5H9 948 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 PITPNM2Q9BZ72 1349 aa13.21□□□□□ -0.3
TUBD1-216ENST00000613721 MYH10P35580 1976 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 POTEFA5A3E0 1075 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 POTEIP0CG38 1075 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 MCM3P25205 808 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 KCNMA1Q12791 1236 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 PRR16Q569H4 304 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 POTEEQ6S8J3 1075 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 FBXO11Q86XK2 927 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 RTKN2Q8IZC4 609 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 CCDC155Q8N6L0 562 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 ERMNQ8TAM6 284 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 ETNPPLQ8TBG4 499 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 GMCL1Q96IK5 515 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 CSRNP1Q96S65 589 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 CEP72Q9P209 647 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 JRKLQ9Y4A0 524 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 CAPN6Q9Y6Q1 641 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 FRMD3A2A2Y4 597 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 SPDYE3A6NKU9 549 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 TBX3O15119 743 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 NDUFB10O96000 172 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 GH2P01242 217 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 CYP2C19P33261 490 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 SLC12A3P55017 1021 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 MARSP56192 900 aaKnown RBP13.2□□□□□ -0.3
TUBD1-216ENST00000613721 CXCL9Q07325 125 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 SPIRE1Q08AE8 756 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 RAD51AP2Q09MP3 1159 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 USH1GQ495M9 461 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 CC2D2BQ6DHV5 1058 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 SCFD1Q8WVM8 642 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 GMLQ99445 158 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 PSMD1Q99460 953 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 P2RX7Q99572 595 aaKnown RBP13.2□□□□□ -0.3
TUBD1-216ENST00000613721 TMEM39BQ9GZU3 492 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 NUCKS1Q9H1E3 243 aaKnown RBP13.2□□□□□ -0.3
TUBD1-216ENST00000613721 SUGCTQ9HAC7 445 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
TUBD1-216ENST00000613721 SSU72P8A0A1W2PR75 194 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 H3BQF6 201 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 FOSP01100 380 aaPredicted RBP13.19□□□□□ -0.3
TUBD1-216ENST00000613721 VIL1P09327 827 aaKnown RBP13.19□□□□□ -0.3
TUBD1-216ENST00000613721 RASSF7Q02833 373 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 NBPF9Q3BBW0 867 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 Q4G0T1 1027 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 TDRD12Q587J7 1177 aaKnown RBP13.19□□□□□ -0.3
TUBD1-216ENST00000613721 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
TUBD1-216ENST00000613721 SYDE2Q5VT97 1194 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 IQCEQ6IPM2 695 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 MIGA2Q7L4E1 593 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 CATSPER3Q86XQ3 398 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 TRIM59Q8IWR1 403 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 TXLNBQ8N3L3 684 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 ALS2CR12Q96Q35 445 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 KCTD10Q9H3F6 313 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 PDE11AQ9HCR9 933 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 ZCCHC17Q9NP64 241 aaKnown RBP13.19□□□□□ -0.3
TUBD1-216ENST00000613721 NLRC4Q9NPP4 1024 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 PIM2Q9P1W9 311 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 ZNF70Q9UC06 446 aaPredicted RBP13.19□□□□□ -0.3
TUBD1-216ENST00000613721 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.19□□□□□ -0.3
TUBD1-216ENST00000613721 PSME4Q14997 1843 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 ATRNL1Q5VV63 1379 aa13.19□□□□□ -0.3
TUBD1-216ENST00000613721 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-216ENST00000613721 TARSL2A2RTX5 802 aaKnown RBP13.18□□□□□ -0.3
TUBD1-216ENST00000613721 ZNF185O15231 689 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 SREBF1P36956 1147 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 MAGEA1P43355 309 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 PRELPP51888 382 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 CASP8Q14790 479 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 GPIHBP1Q8IV16 184 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 SPICE1Q8N0Z3 855 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 LENG9Q96B70 501 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 MLXIPQ9HAP2 919 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-216ENST00000613721 SNX12Q9UMY4 172 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 BCS1LQ9Y276 419 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms