RNA–Protein interactions for RNA: ENST00000613452.1

LINC01138-204, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 1 (best)

Gene LINC01138, Length 1,050 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-204ENST00000613452 PCDHA8Q9Y5H6 950 aa11.03□□□□□ -0.64
LINC01138-204ENST00000613452 SQORQ9Y6N5 450 aa11.03□□□□□ -0.64
LINC01138-204ENST00000613452 SPTBN5Q9NRC6 3674 aaKnown RBP11.03□□□□□ -0.64
LINC01138-204ENST00000613452 GSTTP1A0A1W2PQM5 241 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 LINC01553A4QN01 128 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 EPOPA6NHQ4 379 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 RRN3P2A6NIE6 340 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 SORBS3O60504 671 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 MTMR1Q13613 665 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 TCTN1Q2MV58 587 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 UTP14CQ5TAP6 766 aaKnown RBP11.02□□□□□ -0.65
LINC01138-204ENST00000613452 MCTP2Q6DN12 878 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 PPP1R18Q6NYC8 613 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC01138-204ENST00000613452 RSPH3Q86UC2 560 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 SP7Q8TDD2 431 aaPredicted RBP11.02□□□□□ -0.65
LINC01138-204ENST00000613452 ADAMTS19Q8TE59 1207 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 HLA-CQ95604 372 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 MXRA8Q9BRK3 442 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 CERS4Q9HA82 394 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 SUGCTQ9HAC7 445 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 RIC8AQ9NPQ8 531 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 TRANK1O15050 2925 aa11.02□□□□□ -0.65
LINC01138-204ENST00000613452 MYO9BQ13459 2157 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 MYH6P13533 1939 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 TRIP12Q14669 1992 aaPredicted RBP11.01□□□□□ -0.65
LINC01138-204ENST00000613452 CCDC196A0A1B0GTZ2 297 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 LCHNA4D1U4 455 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 MBLAC1A4D2B0 266 aaPredicted RBP11.01□□□□□ -0.65
LINC01138-204ENST00000613452 ZBTB43O43298 467 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 ARHGEF15O94989 841 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 TCF7P36402 384 aaPredicted RBP11.01□□□□□ -0.65
LINC01138-204ENST00000613452 ARHGAP4P98171 946 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 FUT2Q10981 343 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 SKIV2LQ15477 1246 aaKnown RBP11.01□□□□□ -0.65
LINC01138-204ENST00000613452 APOA5Q6Q788 366 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 NIPA1Q7RTP0 329 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 PLPPR4Q7Z2D5 763 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 CMTR1Q8N1G2 835 aaKnown RBP11.01□□□□□ -0.65
LINC01138-204ENST00000613452 NME8Q8N427 588 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 FBXL16Q8N461 479 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 CCDC82Q8N4S0 544 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 KCNB2Q92953 911 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 UHRF1Q96T88 793 aaPredicted RBP11.01□□□□□ -0.65
LINC01138-204ENST00000613452 V9GY48 417 aaPredicted RBP11.01□□□□□ -0.65
LINC01138-204ENST00000613452 NFASCO94856 1347 aa11.01□□□□□ -0.65
LINC01138-204ENST00000613452 TET1Q8NFU7 2136 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 BAZ2BQ9UIF8 2168 aaKnown RBP11□□□□□ -0.65
LINC01138-204ENST00000613452 MYH7BA7E2Y1 1941 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11□□□□□ -0.65
LINC01138-204ENST00000613452 MEIS1O00470 390 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 ATG7O95352 703 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 CHRNA1P02708 482 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 RB1P06400 928 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 SLC26A2P50443 739 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 RTN1Q16799 776 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 PTPROQ16827 1216 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 CEP55Q53EZ4 464 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 HEATR3Q7Z4Q2 680 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 MICALL1Q8N3F8 863 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 LMBR1Q8WVP7 490 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 GLG1Q92896 1179 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 KCNH7Q9NS40 1196 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 BARHL2Q9NY43 387 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 SCN5AQ14524 2016 aa11□□□□□ -0.65
LINC01138-204ENST00000613452 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.99□□□□□ -0.65
LINC01138-204ENST00000613452 SMCO2A6NFE2 343 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 H3BNC9 293 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 ENPP3O14638 875 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 RXRAP19793 462 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 PPFIA1Q13136 1202 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 AP3B2Q13367 1082 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 COL9A3Q14050 684 aaPredicted RBP10.99□□□□□ -0.65
LINC01138-204ENST00000613452 GRIK4Q16099 956 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 MARCH8Q5T0T0 291 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 IER5Q5VY09 327 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 TMCO2Q7Z6W1 182 aaPredicted RBP10.99□□□□□ -0.65
LINC01138-204ENST00000613452 MICU3Q86XE3 530 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 RASEFQ8IZ41 740 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 MYOCDQ8IZQ8 938 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 IL17RAQ96F46 866 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 SDF4Q9BRK5 362 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 LRRC2Q9BYS8 371 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 IFIH1Q9BYX4 1025 aaKnown RBP10.99□□□□□ -0.65
LINC01138-204ENST00000613452 AZI2Q9H6S1 392 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 JPH1Q9HDC5 661 aaPredicted RBP10.99□□□□□ -0.65
LINC01138-204ENST00000613452 SLC9A2Q9UBY0 812 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 BRPF3Q9ULD4 1205 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 PCDHA2Q9Y5H9 948 aa10.99□□□□□ -0.65
LINC01138-204ENST00000613452 XIRP2A4UGR9 3374 aa10.98□□□□□ -0.65
LINC01138-204ENST00000613452 EPB41L2O43491 1005 aaKnown RBP10.98□□□□□ -0.65
LINC01138-204ENST00000613452 NCK2O43639 380 aa10.98□□□□□ -0.65
LINC01138-204ENST00000613452 CDC45O75419 566 aa10.98□□□□□ -0.65
LINC01138-204ENST00000613452 CYP3A4P08684 503 aa10.98□□□□□ -0.65
LINC01138-204ENST00000613452 CLK2P49760 499 aaKnown RBP10.98□□□□□ -0.65
LINC01138-204ENST00000613452 STAT5BP51692 787 aa10.98□□□□□ -0.65
LINC01138-204ENST00000613452 NAPAP54920 295 aa10.98□□□□□ -0.65
LINC01138-204ENST00000613452 MGAT3Q09327 533 aa10.98□□□□□ -0.65
LINC01138-204ENST00000613452 UBE2SQ16763 222 aa10.98□□□□□ -0.65
LINC01138-204ENST00000613452 PUS10Q3MIT2 529 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms