RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 POLR2FP61218 127 aaKnown RBP19.01■□□□□ 0.63
NEK3-206ENST00000611833 FKBP1AP62942 108 aaKnown RBP19.01■□□□□ 0.63
NEK3-206ENST00000611833 ARHGAP4P98171 946 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 HDLBPQ00341 1268 aaKnown RBP19.01■□□□□ 0.63
NEK3-206ENST00000611833 AP3B2Q13367 1082 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 ASTE1Q2TB18 679 aaPredicted RBP19.01■□□□□ 0.63
NEK3-206ENST00000611833 HAUS3Q68CZ6 603 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 TMEM179Q6ZVK1 233 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 OSBPL9Q96SU4 736 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 CRACR2AQ9BSW2 395 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 HYOU1Q9Y4L1 999 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 A0A0U1RQG5 324 aaPredicted RBP19■□□□□ 0.63
NEK3-206ENST00000611833 PJA2O43164 708 aa19■□□□□ 0.63
NEK3-206ENST00000611833 TCP1P17987 556 aaKnown RBP19■□□□□ 0.63
NEK3-206ENST00000611833 HMGB2P26583 209 aaKnown RBP19■□□□□ 0.63
NEK3-206ENST00000611833 SPIRE1Q08AE8 756 aa19■□□□□ 0.63
NEK3-206ENST00000611833 ADAM9Q13443 819 aa19■□□□□ 0.63
NEK3-206ENST00000611833 PRR16Q569H4 304 aa19■□□□□ 0.63
NEK3-206ENST00000611833 CCDC181Q5TID7 509 aa19■□□□□ 0.63
NEK3-206ENST00000611833 HGSNATQ68CP4 663 aa19■□□□□ 0.63
NEK3-206ENST00000611833 ETNPPLQ8TBG4 499 aa19■□□□□ 0.63
NEK3-206ENST00000611833 SCFD1Q8WVM8 642 aa19■□□□□ 0.63
NEK3-206ENST00000611833 NOX5Q96PH1 765 aa19■□□□□ 0.63
NEK3-206ENST00000611833 PSMB7Q99436 277 aa19■□□□□ 0.63
NEK3-206ENST00000611833 POTEFA5A3E0 1075 aa19■□□□□ 0.63
NEK3-206ENST00000611833 SERPING1P05155 500 aa19■□□□□ 0.63
NEK3-206ENST00000611833 POTEIP0CG38 1075 aa19■□□□□ 0.63
NEK3-206ENST00000611833 IKQ13123 557 aaPredicted RBP19■□□□□ 0.63
NEK3-206ENST00000611833 USH1GQ495M9 461 aa19■□□□□ 0.63
NEK3-206ENST00000611833 NFRKBQ6P4R8 1299 aa19■□□□□ 0.63
NEK3-206ENST00000611833 POTEGQ6S5H5 508 aa19■□□□□ 0.63
NEK3-206ENST00000611833 POTEEQ6S8J3 1075 aa19■□□□□ 0.63
NEK3-206ENST00000611833 MOXD1Q6UVY6 613 aa19■□□□□ 0.63
NEK3-206ENST00000611833 CCNI2Q6ZMN8 369 aaPredicted RBP19■□□□□ 0.63
NEK3-206ENST00000611833 TRIM59Q8IWR1 403 aa19■□□□□ 0.63
NEK3-206ENST00000611833 ERMNQ8TAM6 284 aa19■□□□□ 0.63
NEK3-206ENST00000611833 GDAP1L1Q96MZ0 367 aa19■□□□□ 0.63
NEK3-206ENST00000611833 AMNQ9BXJ7 453 aa19■□□□□ 0.63
NEK3-206ENST00000611833 ZNF219Q9P2Y4 722 aaPredicted RBP19■□□□□ 0.63
NEK3-206ENST00000611833 NOL4O94818 638 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 NDUFB10O96000 172 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 SLC12A3P55017 1021 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 JAG1P78504 1218 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 ABCB5Q2M3G0 1257 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 ARSHQ5FYA8 562 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 MMGT1Q8N4V1 131 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 SYN2Q92777 582 aaPredicted RBP18.99■□□□□ 0.63
NEK3-206ENST00000611833 KCTD10Q9H3F6 313 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 LUC7LQ9NQ29 371 aaKnown RBP18.99■□□□□ 0.63
NEK3-206ENST00000611833 FAM184BQ9ULE4 1060 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 SLX4Q8IY92 1834 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 CETN3O15182 167 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 BUB1O43683 1085 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 NPM3O75607 178 aaKnown RBP18.99■□□□□ 0.63
NEK3-206ENST00000611833 TAL1P17542 331 aaPredicted RBP18.99■□□□□ 0.63
NEK3-206ENST00000611833 CXCR5P32302 372 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 MATR3P43243 847 aaKnown RBP eCLIP18.99■□□□□ 0.63
NEK3-206ENST00000611833 GSPT2Q8IYD1 628 aaKnown RBP18.99■□□□□ 0.63
NEK3-206ENST00000611833 GMCL1P1Q8NEA9 526 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 SPATA4Q8NEY3 305 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 LENG9Q96B70 501 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 SALL4Q9UJQ4 1053 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 SERPINA10Q9UK55 444 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 HPCAL4Q9UM19 191 aa18.99■□□□□ 0.63
NEK3-206ENST00000611833 PLSCR1O15162 318 aa18.98■□□□□ 0.63
NEK3-206ENST00000611833 PAFAH1B1P43034 410 aa18.98■□□□□ 0.63
NEK3-206ENST00000611833 MARSP56192 900 aaKnown RBP18.98■□□□□ 0.63
NEK3-206ENST00000611833 PPP4R3CPQ6ZMV5 832 aa18.98■□□□□ 0.63
NEK3-206ENST00000611833 CATSPER3Q86XQ3 398 aa18.98■□□□□ 0.63
NEK3-206ENST00000611833 RNF10Q8N5U6 811 aaKnown RBP18.98■□□□□ 0.63
NEK3-206ENST00000611833 GMCL1Q96IK5 515 aa18.98■□□□□ 0.63
NEK3-206ENST00000611833 TDRD3Q9H7E2 651 aaKnown RBP18.98■□□□□ 0.63
NEK3-206ENST00000611833 PITPNM2Q9BZ72 1349 aa18.98■□□□□ 0.63
NEK3-206ENST00000611833 FRMD3A2A2Y4 597 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 SPDYE3A6NKU9 549 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 FAM86B1E9PN63 330 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 NCK2O43639 380 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 FAM86B2P0C5J1 330 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 ITIH3Q06033 890 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 RAPGEF1Q13905 1077 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 ZSCAN26Q16670 478 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 ZNF572Q7Z3I7 529 aaPredicted RBP18.97■□□□□ 0.63
NEK3-206ENST00000611833 FBXO11Q86XK2 927 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 HINFPQ9BQA5 517 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 DNM3Q9UQ16 869 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 RBAK-RBAKDNI3L0D1 243 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 MEIS1O00470 390 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 TLR2O60603 784 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 MYBL2P10244 700 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 CAPN2P17655 700 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 AARSP49588 968 aaKnown RBP eCLIP18.97■□□□□ 0.63
NEK3-206ENST00000611833 PSMC6P62333 389 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 ARID5AQ03989 594 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 EDRF1Q3B7T1 1238 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 MCTP2Q6DN12 878 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 GOLGA6L1Q8N7Z2 621 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 LRRC1Q9BTT6 524 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.97■□□□□ 0.63
NEK3-206ENST00000611833 SELENOOQ9BVL4 669 aa18.97■□□□□ 0.63
NEK3-206ENST00000611833 APBA3O96018 575 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms