RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 SRGNP10124 158 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 MAGEA9P43362 315 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 NSFP46459 744 aaKnown RBP13.51□□□□□ -0.25
CDH1-212ENST00000611625 NCAPHQ15003 741 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 SYDE2Q5VT97 1194 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 TBC1D9BQ66K14 1250 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 CCDC89Q8N998 374 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 DEPTORQ8TB45 409 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 P3H4Q92791 437 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 CSRNP1Q96S65 589 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 CD209Q9NNX6 404 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 CCPG1Q9ULG6 757 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 MYO1FO00160 1098 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 KCNH2Q12809 1159 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 DMP1Q13316 513 aaPredicted RBP13.51□□□□□ -0.25
CDH1-212ENST00000611625 NEDD1Q8NHV4 660 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 NEK9Q8TD19 979 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 ARHGEF2Q92974 986 aaKnown RBP13.51□□□□□ -0.25
CDH1-212ENST00000611625 MCUR1Q96AQ8 359 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 RAB20Q9NX57 234 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 PLAAQ9Y263 795 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 FAM169AQ9Y6X4 670 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 RHOBTB3O94955 611 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 FAM182BQ5T319 152 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 MCF2L2Q86YR7 1114 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 MXD3Q9BW11 206 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 ESYT3A0FGR9 886 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 AP3B2Q13367 1082 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 SFR1Q86XK3 245 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 SPATA4Q8NEY3 305 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 POMGNT1Q8WZA1 660 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 PCIF1Q9H4Z3 704 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 TMOD4Q9NZQ9 345 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.5□□□□□ -0.25
CDH1-212ENST00000611625 PI4KBQ9UBF8 816 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 CNTNAP5Q8WYK1 1306 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 POTEB3A0JP26 581 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 POTECB2RU33 542 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 CLTAP09496 248 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 H2AFXP16104 143 aaPredicted RBP13.5□□□□□ -0.25
CDH1-212ENST00000611625 ATF7P17544 494 aaPredicted RBP13.5□□□□□ -0.25
CDH1-212ENST00000611625 POTEBQ6S5H4 581 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 ARMC9Q7Z3E5 817 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 LMNTD2Q8IXW0 634 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.5□□□□□ -0.25
CDH1-212ENST00000611625 ACCSQ96QU6 501 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 EDEM3Q9BZQ6 932 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 TRIM10Q9UDY6 481 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 SNX12Q9UMY4 172 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 USP17L15C9J2P7 530 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 USP17L13C9JLJ4 530 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 USP17L11C9JVI0 530 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 USP17L18D6R9N7 530 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 USP17L22D6RA61 530 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 USP17L17D6RBQ6 530 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 USP17L19D6RCP7 530 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 USP17L20D6RJB6 530 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 FGGP02679 453 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 USP17L24Q0WX57 530 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 ARHGEF16Q5VV41 709 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 PPP1R18Q6NYC8 613 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 USP17L6PQ6QN14 398 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 BBOF1Q8ND07 529 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 CNOT10Q9H9A5 744 aaKnown RBP13.5□□□□□ -0.25
CDH1-212ENST00000611625 DBNDD1Q9H9R9 158 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 AGPAT5Q9NUQ2 364 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 PPP1R3GB7ZBB8 358 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 DR1Q01658 176 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 PTK2Q05397 1052 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 CCDC62Q6P9F0 684 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 SPZ1Q9BXG8 430 aa13.5□□□□□ -0.25
CDH1-212ENST00000611625 UBE2TQ9NPD8 197 aaPredicted RBP13.5□□□□□ -0.25
CDH1-212ENST00000611625 CIB2O75838 187 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 MXI1P50539 228 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 EIF3BP55884 814 aaKnown RBP13.49□□□□□ -0.25
CDH1-212ENST00000611625 NEDD9Q14511 834 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 LLGL1Q15334 1064 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 SNCBQ16143 134 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 SBK1Q52WX2 424 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 PDXDC1Q6P996 788 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 TADA2BQ86TJ2 420 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 CDAN1Q8IWY9 1227 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 HPS3Q969F9 1004 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 SUN1O94901 812 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 HOXA13P31271 388 aaPredicted RBP13.49□□□□□ -0.25
CDH1-212ENST00000611625 SLC8A1P32418 973 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 MAN1A1P33908 653 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 IRX5P78411 483 aaPredicted RBP13.49□□□□□ -0.25
CDH1-212ENST00000611625 PPP1R21Q6ZMI0 780 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 CAPN12Q6ZSI9 719 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 TMEM206Q9H813 350 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 H0YCG3 227 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 HNRNPDLO14979 420 aaKnown RBP13.49□□□□□ -0.25
CDH1-212ENST00000611625 ECEL1O95672 775 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 NR3C1P04150 777 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 CASP7P55210 303 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 CTTNQ14247 550 aaKnown RBP13.49□□□□□ -0.25
CDH1-212ENST00000611625 TBC1D10BQ4KMP7 808 aaPredicted RBP13.49□□□□□ -0.25
CDH1-212ENST00000611625 ANKRD20A3Q5VUR7 823 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 NLGN1Q8N2Q7 840 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms