RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 MEIS1O00470 390 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 ATP8B1O43520 1251 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 EYA4O95677 639 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 CFBP00751 764 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 CAP2P40123 477 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 AMPD2Q01433 879 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
SRRT-213ENST00000611405 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 CETN3O15182 167 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 EPHB6O15197 1021 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 ZRANB2O95218 330 aaKnown RBP eCLIP13.17□□□□□ -0.36e-11■■■■■ 26.8
SRRT-213ENST00000611405 VAV2P52735 878 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 RAD51AP2Q09MP3 1159 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 TRIM59Q8IWR1 403 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 CYP2W1Q8TAV3 490 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 BAP1Q92560 729 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 TMEM39BQ9GZU3 492 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 TUFT1Q9NNX1 390 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 PUF60Q9UHX1 559 aaKnown RBP13.17□□□□□ -0.3
SRRT-213ENST00000611405 COL4A5P29400 1685 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 MAP3K10Q02779 954 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 PDXDC1Q6P996 788 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 RRAGAQ7L523 313 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 ZBED3Q96IU2 234 aaPredicted RBP13.17□□□□□ -0.3
SRRT-213ENST00000611405 REEP2Q9BRK0 252 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 PARD6BQ9BYG5 372 aa13.17□□□□□ -0.3
SRRT-213ENST00000611405 PDGFDQ9GZP0 370 aaPredicted RBP13.17□□□□□ -0.3
SRRT-213ENST00000611405 CTAGE15A4D2H0 777 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 LCA5LO95447 670 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 CTAGE8P0CG41 777 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 KCNMA1Q12791 1236 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 KIF5AQ12840 1032 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 ADAM9Q13443 819 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 EPM2AIP1Q7L775 607 aaPredicted RBP13.16□□□□□ -0.3
SRRT-213ENST00000611405 TRAPPC11Q7Z392 1133 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 CACNA2D4Q7Z3S7 1137 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 CTAGE6Q86UF2 777 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 CTAGE4Q8IX94 777 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 SLC16A10Q8TF71 515 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 SLC5A5Q92911 643 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 TRAF3IP3Q9Y228 551 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRRT-213ENST00000611405 EML1O00423 815 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 USO1O60763 962 aaKnown RBP13.16□□□□□ -0.3
SRRT-213ENST00000611405 PPP2R5CQ13362 524 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 OTOP1Q7RTM1 612 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 TBC1D5Q92609 795 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 SYN2Q92777 582 aaPredicted RBP13.16□□□□□ -0.3
SRRT-213ENST00000611405 PURBQ96QR8 312 aaKnown RBP13.16□□□□□ -0.3
SRRT-213ENST00000611405 HSD17B14Q9BPX1 270 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 WDR18Q9BV38 432 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 EPC1Q9H2F5 836 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 CEP72Q9P209 647 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 ARHGAP20Q9P2F6 1191 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 PGAP2Q9UHJ9 254 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 RABGAP1Q9Y3P9 1069 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 FHOD1Q9Y613 1164 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 LRRC53A6NM62 1247 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 CALUO43852 315 aaPredicted RBP13.16□□□□□ -0.3
SRRT-213ENST00000611405 PSMD10O75832 226 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 ASNSP08243 561 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 ZSCAN20P17040 1043 aaPredicted RBP13.16□□□□□ -0.3
SRRT-213ENST00000611405 GAP43P17677 238 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 MUTP22033 750 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 CYP4A11Q02928 519 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 BRD3Q15059 726 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 KNOP1Q1ED39 458 aaKnown RBP13.16□□□□□ -0.3
SRRT-213ENST00000611405 LRCH2Q5VUJ6 765 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 PAPD7Q5XG87 772 aaKnown RBP13.16□□□□□ -0.3
SRRT-213ENST00000611405 POTEAQ6S8J7 498 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 MIGA2Q7L4E1 593 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 SFR1Q86XK3 245 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 SMCR8Q8TEV9 937 aaPredicted RBP13.16□□□□□ -0.3
SRRT-213ENST00000611405 LACRTQ9GZZ8 138 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 DEF6Q9H4E7 631 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 ZSWIM4Q9H7M6 989 aa13.16□□□□□ -0.3
SRRT-213ENST00000611405 RCCD1A6NED2 376 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 TBCAO75347 108 aaKnown RBP13.15□□□□□ -0.3
SRRT-213ENST00000611405 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
SRRT-213ENST00000611405 KIF11P52732 1056 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 BMT2Q1RMZ1 405 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 TXLNBQ8N3L3 684 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 DEFB129Q9H1M3 183 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 BHMT2Q9H2M3 363 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 RGS17Q9UGC6 210 aaPredicted RBP13.15□□□□□ -0.3
SRRT-213ENST00000611405 PCDHA13Q9Y5I0 950 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 SSU72P8A0A1W2PR75 194 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 ANO9A1A5B4 782 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 PDXKO00764 312 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 ZNF263O14978 683 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 PNMA6AP0CW24 399 aaPredicted RBP13.15□□□□□ -0.3
SRRT-213ENST00000611405 PRELPP51888 382 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 CYP27A1Q02318 531 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 CXCL9Q07325 125 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 MAPK8IP2Q13387 824 aaPredicted RBP13.15□□□□□ -0.3
SRRT-213ENST00000611405 ZYXQ15942 572 aaKnown RBP13.15□□□□□ -0.3
SRRT-213ENST00000611405 CEP55Q53EZ4 464 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 CC2D1AQ6P1N0 951 aaPredicted RBP13.15□□□□□ -0.3
SRRT-213ENST00000611405 FRMD5Q7Z6J6 570 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 LDHDQ86WU2 507 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms