RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 POLD1P28340 1107 aa15.07■□□□□ 0
NEK3-205ENST00000610828 CASP5P51878 434 aa15.07■□□□□ 0
NEK3-205ENST00000610828 TNFAIP1Q13829 316 aa15.07■□□□□ 0
NEK3-205ENST00000610828 CTTNQ14247 550 aaKnown RBP15.07■□□□□ 0
NEK3-205ENST00000610828 CEP55Q53EZ4 464 aa15.07■□□□□ 0
NEK3-205ENST00000610828 SFR1Q86XK3 245 aa15.07■□□□□ 0
NEK3-205ENST00000610828 CCDC155Q8N6L0 562 aa15.07■□□□□ 0
NEK3-205ENST00000610828 PIGOQ8TEQ8 1089 aa15.07■□□□□ 0
NEK3-205ENST00000610828 TRIM10Q9UDY6 481 aa15.07■□□□□ 0
NEK3-205ENST00000610828 PSMD10O75832 226 aa15.06■□□□□ 0
NEK3-205ENST00000610828 IPO7O95373 1038 aaKnown RBP15.06■□□□□ 0
NEK3-205ENST00000610828 HERVK_113P62684 666 aa15.06■□□□□ 0
NEK3-205ENST00000610828 KRT83P78385 493 aa15.06■□□□□ 0
NEK3-205ENST00000610828 TPH2Q8IWU9 490 aa15.06■□□□□ 0
NEK3-205ENST00000610828 CEP63Q96MT8 703 aa15.06■□□□□ 0
NEK3-205ENST00000610828 POLD4Q9HCU8 107 aa15.06■□□□□ 0
NEK3-205ENST00000610828 MYO1AQ9UBC5 1043 aa15.06■□□□□ 0
NEK3-205ENST00000610828 TFR2Q9UP52 801 aa15.06■□□□□ 0
NEK3-205ENST00000610828 RSPH10B2B2RC85 870 aa15.06■□□□□ 0
NEK3-205ENST00000610828 GAS7O60861 476 aa15.06■□□□□ 0
NEK3-205ENST00000610828 RSPH10BP0C881 870 aa15.06■□□□□ 0
NEK3-205ENST00000610828 PTGER2P43116 358 aa15.06■□□□□ 0
NEK3-205ENST00000610828 ADAM9Q13443 819 aa15.06■□□□□ 0
NEK3-205ENST00000610828 FER1L6Q2WGJ9 1857 aa15.06■□□□□ 0
NEK3-205ENST00000610828 KIAA1328Q86T90 577 aa15.06■□□□□ 0
NEK3-205ENST00000610828 CCDC170Q8IYT3 715 aa15.06■□□□□ 0
NEK3-205ENST00000610828 SMCR8Q8TEV9 937 aaPredicted RBP15.06■□□□□ 0
NEK3-205ENST00000610828 DYDC2Q96IM9 177 aa15.06■□□□□ 0
NEK3-205ENST00000610828 TEPSINQ96N21 525 aa15.06■□□□□ 0
NEK3-205ENST00000610828 ATAD5Q96QE3 1844 aa15.06■□□□□ 0
NEK3-205ENST00000610828 HSD17B14Q9BPX1 270 aa15.06■□□□□ 0
NEK3-205ENST00000610828 RUSC1Q9BVN2 902 aa15.06■□□□□ 0
NEK3-205ENST00000610828 SPDYE4A6NLX3 237 aa15.05■□□□□ 0
NEK3-205ENST00000610828 TBCAO75347 108 aaKnown RBP15.05■□□□□ 0
NEK3-205ENST00000610828 SLITRK3O94933 977 aa15.05■□□□□ 0
NEK3-205ENST00000610828 EYA4O95677 639 aa15.05■□□□□ 0
NEK3-205ENST00000610828 GNA14O95837 355 aa15.05■□□□□ 0
NEK3-205ENST00000610828 ICAM1P05362 532 aa15.05■□□□□ 0
NEK3-205ENST00000610828 ZNF280AP59817 542 aaPredicted RBP15.05■□□□□ 0
NEK3-205ENST00000610828 PPP2R5CQ13362 524 aa15.05■□□□□ 0
NEK3-205ENST00000610828 DGKZQ13574 1117 aa15.05■□□□□ 0
NEK3-205ENST00000610828 CCDC122Q5T0U0 273 aa15.05■□□□□ 0
NEK3-205ENST00000610828 SAMD7Q7Z3H4 446 aa15.05■□□□□ 0
NEK3-205ENST00000610828 PRPF38AQ8NAV1 312 aaKnown RBP15.05■□□□□ 0
NEK3-205ENST00000610828 SLC5A5Q92911 643 aa15.05■□□□□ 0
NEK3-205ENST00000610828 ZNF577Q9BSK1 485 aa15.05■□□□□ 0
NEK3-205ENST00000610828 HAUS4Q9H6D7 363 aa15.05■□□□□ 0
NEK3-205ENST00000610828 PLAGL2Q9UPG8 496 aa15.05■□□□□ 0
NEK3-205ENST00000610828 BCS1LQ9Y276 419 aa15.05■□□□□ 0
NEK3-205ENST00000610828 ZNF536O15090 1300 aa15.05■□□□□ -0
NEK3-205ENST00000610828 ARP10275 920 aa15.05■□□□□ -0
NEK3-205ENST00000610828 NR2F2P24468 414 aa15.05■□□□□ -0
NEK3-205ENST00000610828 PPP4R3CPQ6ZMV5 832 aa15.05■□□□□ -0
NEK3-205ENST00000610828 CPXCR1Q8N123 301 aa15.05■□□□□ -0
NEK3-205ENST00000610828 NEK11Q8NG66 645 aa15.05■□□□□ -0
NEK3-205ENST00000610828 HOOK2Q96ED9 719 aa15.05■□□□□ -0
NEK3-205ENST00000610828 CCDC42Q96M95 316 aa15.05■□□□□ -0
NEK3-205ENST00000610828 NAPGQ99747 312 aaPredicted RBP15.05■□□□□ -0
NEK3-205ENST00000610828 TUFT1Q9NNX1 390 aa15.05■□□□□ -0
NEK3-205ENST00000610828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.05■□□□□ -0
NEK3-205ENST00000610828 ASTN2O75129 1339 aaPredicted RBP15.04■□□□□ -0
NEK3-205ENST00000610828 EIF3CLB5ME19 914 aaKnown RBP15.04■□□□□ -0
NEK3-205ENST00000610828 WDR46O15213 610 aaKnown RBP15.04■□□□□ -0
NEK3-205ENST00000610828 PLEKP08567 350 aaPredicted RBP15.04■□□□□ -0
NEK3-205ENST00000610828 PRELPP51888 382 aa15.04■□□□□ -0
NEK3-205ENST00000610828 SETQ01105 290 aaPredicted RBP15.04■□□□□ -0
NEK3-205ENST00000610828 EDRF1Q3B7T1 1238 aa15.04■□□□□ -0
NEK3-205ENST00000610828 TEX35Q5T0J7 233 aa15.04■□□□□ -0
NEK3-205ENST00000610828 RRAGAQ7L523 313 aa15.04■□□□□ -0
NEK3-205ENST00000610828 CACNA2D4Q7Z3S7 1137 aa15.04■□□□□ -0
NEK3-205ENST00000610828 MICALL2Q8IY33 904 aa15.04■□□□□ -0
NEK3-205ENST00000610828 LPAR1Q92633 364 aa15.04■□□□□ -0
NEK3-205ENST00000610828 EIF3CQ99613 913 aaKnown RBP15.04■□□□□ -0
NEK3-205ENST00000610828 ZSWIM4Q9H7M6 989 aa15.04■□□□□ -0
NEK3-205ENST00000610828 CDC23Q9UJX2 597 aa15.04■□□□□ -0
NEK3-205ENST00000610828 GJA3Q9Y6H8 435 aa15.04■□□□□ -0
NEK3-205ENST00000610828 LRRC53A6NM62 1247 aa15.04■□□□□ -0
NEK3-205ENST00000610828 NFIBO00712 420 aa15.04■□□□□ -0
NEK3-205ENST00000610828 ZBTB39O15060 712 aa15.04■□□□□ -0
NEK3-205ENST00000610828 CETN3O15182 167 aa15.04■□□□□ -0
NEK3-205ENST00000610828 PRPF6O94906 941 aaKnown RBP15.04■□□□□ -0
NEK3-205ENST00000610828 MYBP10242 640 aa15.04■□□□□ -0
NEK3-205ENST00000610828 H2AFXP16104 143 aaPredicted RBP15.04■□□□□ -0
NEK3-205ENST00000610828 RPS12P25398 132 aaKnown RBP15.04■□□□□ -0
NEK3-205ENST00000610828 CDK17Q00537 523 aa15.04■□□□□ -0
NEK3-205ENST00000610828 CYP27A1Q02318 531 aa15.04■□□□□ -0
NEK3-205ENST00000610828 KCNMA1Q12791 1236 aa15.04■□□□□ -0
NEK3-205ENST00000610828 KNOP1Q1ED39 458 aaKnown RBP15.04■□□□□ -0
NEK3-205ENST00000610828 TBC1D10BQ4KMP7 808 aaPredicted RBP15.04■□□□□ -0
NEK3-205ENST00000610828 RINT1Q6NUQ1 792 aa15.04■□□□□ -0
NEK3-205ENST00000610828 GPIHBP1Q8IV16 184 aa15.04■□□□□ -0
NEK3-205ENST00000610828 TRIM59Q8IWR1 403 aa15.04■□□□□ -0
NEK3-205ENST00000610828 BCAS3Q9H6U6 928 aa15.04■□□□□ -0
NEK3-205ENST00000610828 SFI1A8K8P3 1242 aa15.03■□□□□ -0
NEK3-205ENST00000610828 IPO5O00410 1097 aaKnown RBP15.03■□□□□ -0
NEK3-205ENST00000610828 KRT86O43790 486 aa15.03■□□□□ -0
NEK3-205ENST00000610828 HNRNPH3P31942 346 aaKnown RBP15.03■□□□□ -0
NEK3-205ENST00000610828 GMPSP49915 693 aaPredicted RBP15.03■□□□□ -0
NEK3-205ENST00000610828 HSD17B4P51659 736 aa15.03■□□□□ -0
NEK3-205ENST00000610828 MARSP56192 900 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms