RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ALG1Q9BT22 464 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 SPC25Q9HBM1 224 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 INTS7Q9NVH2 962 aaKnown RBP6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 BTG4Q9NY30 223 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 NUDT5Q9UKK9 219 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 PCDHA8Q9Y5H6 950 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 OPA1O60313 960 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 ZBTB7AO95365 584 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 ASLP04424 464 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 MYCLP1P12525 358 aaPredicted RBP6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 BCL6P41182 706 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 LSAMPQ13449 338 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 SLC9A5Q14940 896 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 KIZQ2M2Z5 673 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 WWC2Q6AWC2 1192 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 CNNM4Q6P4Q7 775 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 RIOX2Q8IUF8 465 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 LOXL4Q96JB6 756 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 SAMD11Q96NU1 681 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 RNF38Q9H0F5 515 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 IFT57Q9NWB7 429 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 MARCH2Q9P0N8 246 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 DBR1Q9UK59 544 aaKnown RBP6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 TNPO3Q9Y5L0 923 aaKnown RBP6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 X6R8D5 127 aa6.12□□□□□ -1.43
SMCHD1-213ENST00000609587 TCRBV16S1A1N1A0A5B0 115 aa6.11□□□□□ -1.43
SMCHD1-213ENST00000609587 NTRK1P04629 796 aa6.11□□□□□ -1.43
SMCHD1-213ENST00000609587 IGFALSP35858 605 aa6.11□□□□□ -1.43
SMCHD1-213ENST00000609587 PAK1Q13153 545 aa6.11□□□□□ -1.43
SMCHD1-213ENST00000609587 LRRTM3Q86VH5 581 aa6.11□□□□□ -1.43
SMCHD1-213ENST00000609587 TMEM169Q96HH4 297 aa6.11□□□□□ -1.43
SMCHD1-213ENST00000609587 MRIQ9BWK5 157 aa6.11□□□□□ -1.43
SMCHD1-213ENST00000609587 CLDND1Q9NY35 253 aa6.11□□□□□ -1.43
SMCHD1-213ENST00000609587 FBXL7Q9UJT9 491 aa6.11□□□□□ -1.43
SMCHD1-213ENST00000609587 FAN1Q9Y2M0 1017 aa6.11□□□□□ -1.43
SMCHD1-213ENST00000609587 C22orf46C9J442 243 aa6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 ARVCFO00192 962 aa6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 SOD2P04179 222 aa6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 FLT3P36888 993 aa6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 ZNF460Q14592 562 aa6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 CRB2Q5IJ48 1285 aa6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 MROH9Q5TGP6 573 aa6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 CEP68Q76N32 757 aa6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 ZNF761Q86XN6 746 aaPredicted RBP6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 TEX2Q8IWB9 1127 aa6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 ZC3H7AQ8IWR0 971 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 ZFPM1Q8IX07 1006 aa6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 PPARGC1AQ9UBK2 798 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-213ENST00000609587 A0A087X0B3 334 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 B4E1Z4 1266 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 FAM47E-STBD1D6RA91 191 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 H7BY64 318 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 PDE8AO60658 829 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 ASGR2P07307 311 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 SRGAP2CP0DJJ0 459 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 NCAM1P13591 858 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 GRK2P25098 689 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 GRK3P35626 688 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 ACVRL1P37023 503 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 GDF5P43026 501 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 SLC6A11P48066 632 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 CRIP3Q6Q6R5 217 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 B3GNT8Q7Z7M8 397 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 NLRP10Q86W26 655 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 DCP2Q8IU60 420 aaKnown RBP6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 PCDH19Q8TAB3 1148 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 TRMT2BQ96GJ1 504 aaKnown RBP6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 TARS2Q9BW92 718 aaKnown RBP6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 SLITRK6Q9H5Y7 841 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 IPPKQ9H8X2 491 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 RXFP1Q9HBX9 757 aa6.09□□□□□ -1.43
SMCHD1-213ENST00000609587 GSG1L2A8MUP6 293 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 PLATP00750 562 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 JMJD7P0C870 316 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 FPR2P25090 351 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 NEK4P51957 841 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 PTPROQ16827 1216 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 TBC1D10BQ4KMP7 808 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 UBE2R2Q712K3 238 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 SPRED1Q7Z699 444 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 DDX53Q86TM3 631 aaKnown RBP6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 THNSL2Q86YJ6 484 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 PPM1KQ8N3J5 372 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 CHAC2Q8WUX2 184 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 CPA5Q8WXQ8 436 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 SEC14L1Q92503 715 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 ALG3Q92685 438 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 AP5M1Q9H0R1 490 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 CDIP1Q9H305 208 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 MAPRE3Q9UPY8 281 aa6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 COA3Q9Y2R0 106 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-213ENST00000609587 CYR61O00622 381 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 SGSM2O43147 1006 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 VIL1P09327 827 aaKnown RBP6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 KCNA6P17658 529 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 CNGA1P29973 690 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 SOX5P35711 763 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 STAT3P40763 770 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 CDSNQ15517 529 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 CFAP100Q494V2 611 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms