RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 EMSYQ7Z589 1322 aa18.37■□□□□ 0.53
SGMS1-209ENST00000609445 SPDYE3A6NKU9 549 aa18.36■□□□□ 0.53
SGMS1-209ENST00000609445 EFCAB14O75071 495 aa18.36■□□□□ 0.53
SGMS1-209ENST00000609445 CDC45O75419 566 aa18.36■□□□□ 0.53
SGMS1-209ENST00000609445 SIP14410 1827 aa18.36■□□□□ 0.53
SGMS1-209ENST00000609445 POU3F3P20264 500 aaPredicted RBP18.36■□□□□ 0.53
SGMS1-209ENST00000609445 TCF7P36402 384 aaPredicted RBP18.36■□□□□ 0.53
SGMS1-209ENST00000609445 ADAM17P78536 824 aa18.36■□□□□ 0.53
SGMS1-209ENST00000609445 FUT2Q10981 343 aa18.36■□□□□ 0.53
SGMS1-209ENST00000609445 DHX32Q7L7V1 743 aaKnown RBP18.36■□□□□ 0.53
SGMS1-209ENST00000609445 GDPD5Q8WTR4 605 aa18.36■□□□□ 0.53
SGMS1-209ENST00000609445 PGBD1Q96JS3 809 aa18.36■□□□□ 0.53
SGMS1-209ENST00000609445 RAD9AQ99638 391 aa18.36■□□□□ 0.53
SGMS1-209ENST00000609445 MTUS1Q9ULD2 1270 aa18.36■□□□□ 0.53
SGMS1-209ENST00000609445 GSTTP1A0A1W2PQM5 241 aa18.35■□□□□ 0.53
SGMS1-209ENST00000609445 LINC01553A4QN01 128 aa18.35■□□□□ 0.53
SGMS1-209ENST00000609445 LPXNO60711 386 aa18.35■□□□□ 0.53
SGMS1-209ENST00000609445 GNAT1P11488 350 aa18.35■□□□□ 0.53
SGMS1-209ENST00000609445 TFF2Q03403 129 aa18.35■□□□□ 0.53
SGMS1-209ENST00000609445 MKRN4PQ13434 485 aaPredicted RBP18.35■□□□□ 0.53
SGMS1-209ENST00000609445 MTMR1Q13613 665 aa18.35■□□□□ 0.53
SGMS1-209ENST00000609445 SKIV2LQ15477 1246 aaKnown RBP18.35■□□□□ 0.53
SGMS1-209ENST00000609445 RTN1Q16799 776 aa18.35■□□□□ 0.53
SGMS1-209ENST00000609445 PLEKHG4Q58EX7 1191 aa18.35■□□□□ 0.53
SGMS1-209ENST00000609445 GIMAP8Q8ND71 665 aaPredicted RBP18.35■□□□□ 0.53
SGMS1-209ENST00000609445 RBM28Q9NW13 759 aaKnown RBP18.35■□□□□ 0.53
SGMS1-209ENST00000609445 ZBTB43O43298 467 aa18.34■□□□□ 0.53
SGMS1-209ENST00000609445 CPA1P15085 419 aa18.34■□□□□ 0.53
SGMS1-209ENST00000609445 MARK3P27448 753 aa18.34■□□□□ 0.53
SGMS1-209ENST00000609445 NAPAP54920 295 aa18.34■□□□□ 0.53
SGMS1-209ENST00000609445 TSGA10IPQ3SY00 556 aa18.34■□□□□ 0.53
SGMS1-209ENST00000609445 RUFY4Q6ZNE9 571 aa18.34■□□□□ 0.53
SGMS1-209ENST00000609445 MYOCDQ8IZQ8 938 aa18.34■□□□□ 0.53
SGMS1-209ENST00000609445 ADAMTS19Q8TE59 1207 aa18.34■□□□□ 0.53
SGMS1-209ENST00000609445 CDHR1Q96JP9 859 aa18.34■□□□□ 0.53
SGMS1-209ENST00000609445 TSPYL2Q9H2G4 693 aaPredicted RBP18.34■□□□□ 0.53
SGMS1-209ENST00000609445 JADE2Q9NQC1 790 aa18.34■□□□□ 0.53
SGMS1-209ENST00000609445 FAM217BQ9NTX9 383 aaPredicted RBP18.34■□□□□ 0.53
SGMS1-209ENST00000609445 V9GY48 417 aaPredicted RBP18.34■□□□□ 0.53
SGMS1-209ENST00000609445 KLF18A0A0U1RQI7 1052 aa18.33■□□□□ 0.52
SGMS1-209ENST00000609445 GOLGA8AA7E2F4 631 aa18.33■□□□□ 0.52
SGMS1-209ENST00000609445 GOLGA8BA8MQT2 603 aa18.33■□□□□ 0.52
SGMS1-209ENST00000609445 CAND2O75155 1236 aa18.33■□□□□ 0.52
SGMS1-209ENST00000609445 AMHP03971 560 aa18.33■□□□□ 0.52
SGMS1-209ENST00000609445 CDC27P30260 824 aa18.33■□□□□ 0.52
SGMS1-209ENST00000609445 SEPT1Q8WYJ6 367 aa18.33■□□□□ 0.52
SGMS1-209ENST00000609445 SEPT8Q92599 483 aa18.33■□□□□ 0.52
SGMS1-209ENST00000609445 RIC8AQ9NPQ8 531 aa18.33■□□□□ 0.52
SGMS1-209ENST00000609445 NAP1L2Q9ULW6 460 aaPredicted RBP18.33■□□□□ 0.52
SGMS1-209ENST00000609445 NRCAMQ92823 1304 aa18.32■□□□□ 0.52
SGMS1-209ENST00000609445 STXBP3O00186 592 aa18.32■□□□□ 0.52
SGMS1-209ENST00000609445 TNFRSF10AO00220 468 aa18.32■□□□□ 0.52
SGMS1-209ENST00000609445 ADCY7P51828 1080 aa18.32■□□□□ 0.52
SGMS1-209ENST00000609445 ERVK-21P61565 698 aa18.32■□□□□ 0.52
SGMS1-209ENST00000609445 PPFIA1Q13136 1202 aa18.32■□□□□ 0.52
SGMS1-209ENST00000609445 FAM26DQ5JW98 314 aa18.32■□□□□ 0.52
SGMS1-209ENST00000609445 CYP2W1Q8TAV3 490 aa18.32■□□□□ 0.52
SGMS1-209ENST00000609445 TGS1Q96RS0 853 aaKnown RBP18.32■□□□□ 0.52
SGMS1-209ENST00000609445 MXRA8Q9BRK3 442 aa18.32■□□□□ 0.52
SGMS1-209ENST00000609445 EHMT1Q9H9B1 1298 aa18.32■□□□□ 0.52
SGMS1-209ENST00000609445 TMEM260Q9NX78 707 aa18.32■□□□□ 0.52
SGMS1-209ENST00000609445 MUC3AQ02505 3323 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.31■□□□□ 0.52
SGMS1-209ENST00000609445 KCNQ1P51787 676 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 KRT32Q14532 448 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 GRIK4Q16099 956 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 PPP1R18Q6NYC8 613 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 IL27Q8NEV9 243 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 GLG1Q92896 1179 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 ZBTB10Q96DT7 871 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 UHRF1Q96T88 793 aaPredicted RBP18.31■□□□□ 0.52
SGMS1-209ENST00000609445 PCYT2Q99447 389 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 C17orf80Q9BSJ5 609 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 ANO3Q9BYT9 981 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 SUGCTQ9HAC7 445 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 ERAP1Q9NZ08 941 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 INSL6Q9Y581 213 aa18.31■□□□□ 0.52
SGMS1-209ENST00000609445 SMCO2A6NFE2 343 aa18.3■□□□□ 0.52
SGMS1-209ENST00000609445 CHRNA1P02708 482 aa18.3■□□□□ 0.52
SGMS1-209ENST00000609445 ARP10275 920 aa18.3■□□□□ 0.52
SGMS1-209ENST00000609445 IGBP1P78318 339 aa18.3■□□□□ 0.52
SGMS1-209ENST00000609445 HTRA4P83105 476 aaPredicted RBP18.3■□□□□ 0.52
SGMS1-209ENST00000609445 APOBRQ0VD83 1088 aa18.3■□□□□ 0.52
SGMS1-209ENST00000609445 MARCH8Q5T0T0 291 aa18.3■□□□□ 0.52
SGMS1-209ENST00000609445 NECAB3Q96P71 396 aaPredicted RBP18.3■□□□□ 0.52
SGMS1-209ENST00000609445 SMARCAD1Q9H4L7 1026 aa18.3■□□□□ 0.52
SGMS1-209ENST00000609445 JPH1Q9HDC5 661 aaPredicted RBP18.3■□□□□ 0.52
SGMS1-209ENST00000609445 KCNH7Q9NS40 1196 aa18.3■□□□□ 0.52
SGMS1-209ENST00000609445 BARHL2Q9NY43 387 aa18.3■□□□□ 0.52
SGMS1-209ENST00000609445 XIRP2A4UGR9 3374 aa18.3■□□□□ 0.52
SGMS1-209ENST00000609445 NLRC5Q86WI3 1866 aa18.3■□□□□ 0.52
SGMS1-209ENST00000609445 LOXHD1Q8IVV2 1947 aa18.29■□□□□ 0.52
SGMS1-209ENST00000609445 MAFGO15525 162 aa18.29■□□□□ 0.52
SGMS1-209ENST00000609445 UPP2O95045 317 aa18.29■□□□□ 0.52
SGMS1-209ENST00000609445 GHRP10912 638 aa18.29■□□□□ 0.52
SGMS1-209ENST00000609445 BMP1P13497 986 aa18.29■□□□□ 0.52
SGMS1-209ENST00000609445 ADD1P35611 737 aaKnown RBP18.29■□□□□ 0.52
SGMS1-209ENST00000609445 MGAT3Q09327 533 aa18.29■□□□□ 0.52
SGMS1-209ENST00000609445 SP7Q8TDD2 431 aaPredicted RBP18.29■□□□□ 0.52
SGMS1-209ENST00000609445 KCNB2Q92953 911 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms