RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 ZNF746Q6NUN9 644 aaPredicted RBP16.2■□□□□ 0.18
HDDC2-206ENST00000608461 SMAP1Q8IYB5 467 aaPredicted RBP16.2■□□□□ 0.18
HDDC2-206ENST00000608461 CCDC155Q8N6L0 562 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 CAGE1Q8TC20 777 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 LENG9Q96B70 501 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 MBOAT7Q96N66 472 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 RIT2Q99578 217 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 AZI2Q9H6S1 392 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 TRMT13Q9NUP7 481 aaKnown RBP16.2■□□□□ 0.18
HDDC2-206ENST00000608461 HDAC6Q9UBN7 1215 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 TCEAL9Q9UHQ7 104 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 DHX15O43143 795 aaKnown RBP16.19■□□□□ 0.18
HDDC2-206ENST00000608461 LGR5O75473 907 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 ITGB8P26012 769 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 HOXC8P31273 242 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 ACTR2P61160 394 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 KRT76Q01546 638 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 FPGSQ05932 587 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 PPIGQ13427 754 aaKnown RBP eCLIP16.19■□□□□ 0.18
HDDC2-206ENST00000608461 BFSP2Q13515 415 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 SAFBQ15424 915 aaKnown RBP eCLIP16.19■□□□□ 0.18
HDDC2-206ENST00000608461 HABP4Q5JVS0 413 aaKnown RBP16.19■□□□□ 0.18
HDDC2-206ENST00000608461 PLPPR4Q7Z2D5 763 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 NEK8Q86SG6 692 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 TDHQ8IZJ6 230 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 FAM184AQ8NB25 1140 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 NOC4LQ9BVI4 516 aaKnown RBP16.19■□□□□ 0.18
HDDC2-206ENST00000608461 PKD2L1Q9P0L9 805 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 NRCAMQ92823 1304 aa16.19■□□□□ 0.18
HDDC2-206ENST00000608461 EDIL3O43854 480 aa16.18■□□□□ 0.18
HDDC2-206ENST00000608461 PARNO95453 639 aaKnown RBP16.18■□□□□ 0.18
HDDC2-206ENST00000608461 CHMP4BP1P59074 171 aa16.18■□□□□ 0.18
HDDC2-206ENST00000608461 SP4Q02446 784 aa16.18■□□□□ 0.18
HDDC2-206ENST00000608461 RBL2Q08999 1139 aa16.18■□□□□ 0.18
HDDC2-206ENST00000608461 PTK7Q13308 1070 aa16.18■□□□□ 0.18
HDDC2-206ENST00000608461 INF2Q27J81 1249 aa16.18■□□□□ 0.18
HDDC2-206ENST00000608461 KRT40Q6A162 431 aa16.18■□□□□ 0.18
HDDC2-206ENST00000608461 GDF6Q6KF10 455 aaPredicted RBP16.18■□□□□ 0.18
HDDC2-206ENST00000608461 GLG1Q92896 1179 aa16.18■□□□□ 0.18
HDDC2-206ENST00000608461 TMX3Q96JJ7 454 aa16.18■□□□□ 0.18
HDDC2-206ENST00000608461 C8orf76Q96K31 380 aa16.18■□□□□ 0.18
HDDC2-206ENST00000608461 GJB4Q9NTQ9 266 aa16.18■□□□□ 0.18
HDDC2-206ENST00000608461 IGKV6D-21A0A0A0MT36 114 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 C17orf102A2RUQ5 167 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 TBX3O15119 743 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 MSH4O15457 936 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 RPLP2P05387 115 aaKnown RBP16.17■□□□□ 0.18
HDDC2-206ENST00000608461 SMIM10L2AP0DMW4 78 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 SMIM10L2BP0DMW5 78 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 RFC2P35250 354 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 UTP14CQ5TAP6 766 aaKnown RBP16.17■□□□□ 0.18
HDDC2-206ENST00000608461 ABHD15Q6UXT9 468 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 PIK3AP1Q6ZUJ8 805 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 DIS3L2Q8IYB7 885 aaKnown RBP16.17■□□□□ 0.18
HDDC2-206ENST00000608461 RPUSD2Q8IZ73 545 aaKnown RBP16.17■□□□□ 0.18
HDDC2-206ENST00000608461 RETREG2Q8NC44 543 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 FBXO18Q8NFZ0 1043 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 AFAP1L1Q8TED9 768 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 SLC5A5Q92911 643 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 TNFRSF25Q93038 417 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 RNPEPQ9H4A4 650 aa16.17■□□□□ 0.18
HDDC2-206ENST00000608461 CAND2O75155 1236 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 PFKMP08237 780 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 CYP2C9P11712 490 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 SFNP31947 248 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 STAT5BP51692 787 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 LRIT3Q3SXY7 679 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 FAM160B1Q5W0V3 765 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 MIS18BP1Q6P0N0 1132 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 RDM1Q8NG50 284 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 OXER1Q8TDS5 423 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 FAM20AQ96MK3 541 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 PPP1R12CQ9BZL4 782 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 FOXP1Q9H334 677 aaPredicted RBP16.16■□□□□ 0.18
HDDC2-206ENST00000608461 DDX25Q9UHL0 483 aaKnown RBP16.16■□□□□ 0.18
HDDC2-206ENST00000608461 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.16■□□□□ 0.18
HDDC2-206ENST00000608461 PCDHA10Q9Y5I2 948 aa16.16■□□□□ 0.18
HDDC2-206ENST00000608461 RANBP2P49792 3224 aaKnown RBP16.16■□□□□ 0.18
HDDC2-206ENST00000608461 RRN3P2A6NIE6 340 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 BTBD18B2RXH4 712 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 GAS7O60861 476 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 CCNE2O96020 404 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 PSAPP07602 524 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 CYP2C18P33260 490 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 ADAM17P78536 824 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 NR5A1Q13285 461 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 LETM2Q2VYF4 491 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 LRCH2Q5VUJ6 765 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 PSRC1Q6PGN9 363 aaPredicted RBP16.15■□□□□ 0.18
HDDC2-206ENST00000608461 SERINC5Q86VE9 423 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 TRIM50Q86XT4 487 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 ATP6V0A1Q93050 837 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 CTAGE1Q96RT6 745 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 TEKT3Q9BXF9 490 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 IL23AQ9NPF7 189 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 TELO2Q9Y4R8 837 aa16.15■□□□□ 0.18
HDDC2-206ENST00000608461 KAT6AQ92794 2004 aa16.14■□□□□ 0.17
HDDC2-206ENST00000608461 WDR64B1ANS9 1081 aa16.14■□□□□ 0.17
HDDC2-206ENST00000608461 CCNT1O60563 726 aaKnown RBP16.14■□□□□ 0.17
HDDC2-206ENST00000608461 PSMD10O75832 226 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms