RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 TCF7P36402 384 aaPredicted RBP17.08■□□□□ 0.32
CTSA-216ENST00000607212 IGBP1P78318 339 aa17.08■□□□□ 0.32
CTSA-216ENST00000607212 HTRA4P83105 476 aaPredicted RBP17.08■□□□□ 0.32
CTSA-216ENST00000607212 PPFIA1Q13136 1202 aa17.08■□□□□ 0.32
CTSA-216ENST00000607212 TMEM192Q8IY95 271 aa17.08■□□□□ 0.32
CTSA-216ENST00000607212 CMTR1Q8N1G2 835 aaKnown RBP17.08■□□□□ 0.32
CTSA-216ENST00000607212 CCDC82Q8N4S0 544 aa17.08■□□□□ 0.32
CTSA-216ENST00000607212 TOP1MTQ969P6 601 aa17.08■□□□□ 0.32
CTSA-216ENST00000607212 CDHR1Q96JP9 859 aa17.08■□□□□ 0.32
CTSA-216ENST00000607212 PSTPIP2Q9H939 334 aa17.08■□□□□ 0.32
CTSA-216ENST00000607212 NRCAMQ92823 1304 aa17.07■□□□□ 0.32
CTSA-216ENST00000607212 FAM86C2PA6NEL3 165 aa17.07■□□□□ 0.32
CTSA-216ENST00000607212 MCM5P33992 734 aa17.07■□□□□ 0.32
CTSA-216ENST00000607212 CTNNB1P35222 781 aa17.07■□□□□ 0.32
CTSA-216ENST00000607212 PTCRAQ6ISU1 281 aaPredicted RBP17.07■□□□□ 0.32
CTSA-216ENST00000607212 TMTC2Q8N394 836 aa17.07■□□□□ 0.32
CTSA-216ENST00000607212 FIBCD1Q8N539 461 aa17.07■□□□□ 0.32
CTSA-216ENST00000607212 MAP4K1Q92918 833 aa17.07■□□□□ 0.32
CTSA-216ENST00000607212 IL17RAQ96F46 866 aa17.07■□□□□ 0.32
CTSA-216ENST00000607212 MAP3K14Q99558 947 aa17.07■□□□□ 0.32
CTSA-216ENST00000607212 SENP7Q9BQF6 1050 aa17.07■□□□□ 0.32
CTSA-216ENST00000607212 EHMT1Q9H9B1 1298 aa17.07■□□□□ 0.32
CTSA-216ENST00000607212 TELO2Q9Y4R8 837 aa17.07■□□□□ 0.32
CTSA-216ENST00000607212 RALGAPA2Q2PPJ7 1873 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 BRWD1Q9NSI6 2320 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 hCG_1642624A0A1W2PR95 340 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 MEIS2O14770 477 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 CALM1P0DP23 149 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 CALM2P0DP24 149 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 CALM3P0DP25 149 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 HOXC8P31273 242 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 PLA2G5P39877 138 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 UBE2SQ16763 222 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 LEXMQ3ZCV2 418 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 TAF2Q6P1X5 1199 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 SYNE3Q6ZMZ3 975 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 HEATR3Q7Z4Q2 680 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 SRBD1Q8N5C6 995 aaKnown RBP17.06■□□□□ 0.32
CTSA-216ENST00000607212 BANK1Q8NDB2 785 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 SP7Q8TDD2 431 aaPredicted RBP17.06■□□□□ 0.32
CTSA-216ENST00000607212 SEPT1Q8WYJ6 367 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 GPRASP2Q96D09 838 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 TMEM87BQ96K49 555 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 LRFN3Q9BTN0 628 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 OSBPL7Q9BZF2 842 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 ERAP1Q9NZ08 941 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 SLC12A7Q9Y666 1083 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 TRANK1O15050 2925 aa17.06■□□□□ 0.32
CTSA-216ENST00000607212 REV3LO60673 3130 aa17.05■□□□□ 0.32
CTSA-216ENST00000607212 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.05■□□□□ 0.32
CTSA-216ENST00000607212 H3BNC9 293 aa17.05■□□□□ 0.32
CTSA-216ENST00000607212 H3BQ06 376 aaPredicted RBP17.05■□□□□ 0.32
CTSA-216ENST00000607212 PIK3CDO00329 1044 aa17.05■□□□□ 0.32
CTSA-216ENST00000607212 SH2B2O14492 632 aaPredicted RBP17.05■□□□□ 0.32
CTSA-216ENST00000607212 IL9P15248 144 aa17.05■□□□□ 0.32
CTSA-216ENST00000607212 IBSPP21815 317 aaPredicted RBP17.05■□□□□ 0.32
CTSA-216ENST00000607212 MTMR1Q13613 665 aa17.05■□□□□ 0.32
CTSA-216ENST00000607212 GRIK4Q16099 956 aa17.05■□□□□ 0.32
CTSA-216ENST00000607212 TCEAL5Q5H9L2 206 aa17.05■□□□□ 0.32
CTSA-216ENST00000607212 RUFY4Q6ZNE9 571 aa17.05■□□□□ 0.32
CTSA-216ENST00000607212 GJD3Q8N144 294 aa17.05■□□□□ 0.32
CTSA-216ENST00000607212 LRRC2Q9BYS8 371 aa17.05■□□□□ 0.32
CTSA-216ENST00000607212 TUBE1Q9UJT0 475 aa17.05■□□□□ 0.32
CTSA-216ENST00000607212 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.04■□□□□ 0.32
CTSA-216ENST00000607212 M0QZ92 97 aa17.04■□□□□ 0.32
CTSA-216ENST00000607212 ATP9AO75110 1047 aa17.04■□□□□ 0.32
CTSA-216ENST00000607212 SMARCA1P28370 1054 aa17.04■□□□□ 0.32
CTSA-216ENST00000607212 FAM26DQ5JW98 314 aa17.04■□□□□ 0.32
CTSA-216ENST00000607212 MICU3Q86XE3 530 aa17.04■□□□□ 0.32
CTSA-216ENST00000607212 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.04■□□□□ 0.32
CTSA-216ENST00000607212 DNAJB3Q8WWF6 145 aa17.04■□□□□ 0.32
CTSA-216ENST00000607212 FAM49AQ9H0Q0 323 aaPredicted RBP17.04■□□□□ 0.32
CTSA-216ENST00000607212 SMARCAD1Q9H4L7 1026 aa17.04■□□□□ 0.32
CTSA-216ENST00000607212 NSUN3Q9H649 340 aaKnown RBP17.04■□□□□ 0.32
CTSA-216ENST00000607212 AZI2Q9H6S1 392 aa17.04■□□□□ 0.32
CTSA-216ENST00000607212 CLDND1Q9NY35 253 aa17.04■□□□□ 0.32
CTSA-216ENST00000607212 TRPC6Q9Y210 931 aa17.04■□□□□ 0.32
CTSA-216ENST00000607212 FAM50BQ9Y247 325 aa17.04■□□□□ 0.32
CTSA-216ENST00000607212 CHRNA1P02708 482 aa17.03■□□□□ 0.32
CTSA-216ENST00000607212 KCNA2P16389 499 aa17.03■□□□□ 0.32
CTSA-216ENST00000607212 MKRN4PQ13434 485 aaPredicted RBP17.03■□□□□ 0.32
CTSA-216ENST00000607212 PUS10Q3MIT2 529 aaKnown RBP17.03■□□□□ 0.32
CTSA-216ENST00000607212 KHSRPQ92945 711 aaKnown RBP eCLIP17.03■□□□□ 0.32
CTSA-216ENST00000607212 UIMC1Q96RL1 719 aa17.03■□□□□ 0.32
CTSA-216ENST00000607212 MTA3Q9BTC8 594 aa17.03■□□□□ 0.32
CTSA-216ENST00000607212 ANO2Q9NQ90 1003 aa17.03■□□□□ 0.32
CTSA-216ENST00000607212 PCDHA6Q9UN73 950 aa17.03■□□□□ 0.32
CTSA-216ENST00000607212 RWDD3Q9Y3V2 267 aa17.03■□□□□ 0.32
CTSA-216ENST00000607212 PCDHA8Q9Y5H6 950 aa17.03■□□□□ 0.32
CTSA-216ENST00000607212 CDY2AQ9Y6F7 541 aa17.03■□□□□ 0.32
CTSA-216ENST00000607212 GSTTP1A0A1W2PQM5 241 aa17.02■□□□□ 0.32
CTSA-216ENST00000607212 SLC27A2O14975 620 aa17.02■□□□□ 0.32
CTSA-216ENST00000607212 BTG3Q14201 252 aaPredicted RBP17.02■□□□□ 0.32
CTSA-216ENST00000607212 CSPP1Q1MSJ5 1256 aa17.02■□□□□ 0.32
CTSA-216ENST00000607212 FAM178BQ8IXR5 827 aa17.02■□□□□ 0.32
CTSA-216ENST00000607212 SDF4Q9BRK5 362 aa17.02■□□□□ 0.32
CTSA-216ENST00000607212 C11orf84Q9BUA3 381 aaPredicted RBP17.02■□□□□ 0.32
CTSA-216ENST00000607212 JPH1Q9HDC5 661 aaPredicted RBP17.02■□□□□ 0.32
CTSA-216ENST00000607212 CD320Q9NPF0 282 aa17.02■□□□□ 0.32
CTSA-216ENST00000607212 ADGRA3Q8IWK6 1321 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms