RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 TRIM6-TRIM34B2RNG4 842 aa17.36■□□□□ 0.37
SSBP4-214ENST00000607020 TBX10O75333 385 aa17.36■□□□□ 0.37
SSBP4-214ENST00000607020 SDSP20132 328 aa17.36■□□□□ 0.37
SSBP4-214ENST00000607020 MRPS9P82933 396 aaKnown RBP17.36■□□□□ 0.37
SSBP4-214ENST00000607020 CBX2Q14781 532 aaPredicted RBP17.36■□□□□ 0.37
SSBP4-214ENST00000607020 CLUL1Q15846 466 aa17.36■□□□□ 0.37
SSBP4-214ENST00000607020 TAF2Q6P1X5 1199 aa17.36■□□□□ 0.37
SSBP4-214ENST00000607020 TRIM67Q6ZTA4 783 aa17.36■□□□□ 0.37
SSBP4-214ENST00000607020 PRSS33Q8NF86 280 aa17.36■□□□□ 0.37
SSBP4-214ENST00000607020 KRT23Q9C075 422 aa17.36■□□□□ 0.37
SSBP4-214ENST00000607020 MAD2L2Q9UI95 211 aa17.36■□□□□ 0.37
SSBP4-214ENST00000607020 ZNF215Q9UL58 517 aaPredicted RBP17.36■□□□□ 0.37
SSBP4-214ENST00000607020 PLAGL2Q9UPG8 496 aa17.36■□□□□ 0.37
SSBP4-214ENST00000607020 MICAL3Q7RTP6 2002 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 LOC730098B7Z3J9 87 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 ST18O60284 1047 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 DGKIO75912 1065 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 GTF2F1P35269 517 aaKnown RBP eCLIP17.35■□□□□ 0.371e-6■■■■□ 26.2
SSBP4-214ENST00000607020 MGAT3Q09327 533 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 SEMA3FQ13275 785 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 LMBR1Q8WVP7 490 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 PPP2R3CQ969Q6 453 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 PHOX2BQ99453 314 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 SENP7Q9BQF6 1050 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 RIOX1Q9H6W3 641 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 FRMPD4Q14CM0 1322 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 MYO7AQ13402 2215 aa17.35■□□□□ 0.37
SSBP4-214ENST00000607020 TMEM221A6NGB7 291 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 M0R296 226 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 FIBPO43427 364 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 GHRP10912 638 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 ARHGAP4P98171 946 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 COASYQ13057 564 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 HDAC1Q13547 482 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-214ENST00000607020 BTG3Q14201 252 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-214ENST00000607020 LPIN1Q14693 890 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 SEC23AQ15436 765 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 IFIT1BQ5T764 474 aaKnown RBP17.34■□□□□ 0.37
SSBP4-214ENST00000607020 IER5LQ5T953 404 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 CYFIP1Q7L576 1253 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 FCHSD1Q86WN1 690 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 CRIPAKQ8N1N5 446 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 EFHBQ8N7U6 833 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 SMRP1Q8NCR6 262 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 PBXIP1Q96AQ6 731 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 ZFP91Q96JP5 570 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-214ENST00000607020 UBAC1Q9BSL1 405 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 DSCC1Q9BVC3 393 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 IGFLR1Q9H665 355 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 CNNM2Q9H8M5 875 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 CLEC1BQ9P126 229 aa17.34■□□□□ 0.37
SSBP4-214ENST00000607020 LINC01565O15544 149 aa17.33■□□□□ 0.36
SSBP4-214ENST00000607020 ZXDAP98168 799 aa17.33■□□□□ 0.36
SSBP4-214ENST00000607020 IMMTQ16891 758 aaKnown RBP17.33■□□□□ 0.36
SSBP4-214ENST00000607020 SLC35G1Q2M3R5 365 aa17.33■□□□□ 0.36
SSBP4-214ENST00000607020 XRRA1Q6P2D8 792 aa17.33■□□□□ 0.36
SSBP4-214ENST00000607020 RSPH3Q86UC2 560 aa17.33■□□□□ 0.36
SSBP4-214ENST00000607020 SPPL3Q8TCT6 385 aa17.33■□□□□ 0.36
SSBP4-214ENST00000607020 RILPL2Q969X0 211 aa17.33■□□□□ 0.36
SSBP4-214ENST00000607020 TECTAO75443 2155 aa17.33■□□□□ 0.36
SSBP4-214ENST00000607020 TRIOO75962 3097 aa17.33■□□□□ 0.36
SSBP4-214ENST00000607020 KIAA1217Q5T5P2 1943 aa17.33■□□□□ 0.36
SSBP4-214ENST00000607020 MBLAC1A4D2B0 266 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-214ENST00000607020 TCF15Q12870 199 aa17.32■□□□□ 0.36
SSBP4-214ENST00000607020 FBXO47Q5MNV8 452 aa17.32■□□□□ 0.36
SSBP4-214ENST00000607020 RUFY4Q6ZNE9 571 aa17.32■□□□□ 0.36
SSBP4-214ENST00000607020 TRIM50Q86XT4 487 aa17.32■□□□□ 0.36
SSBP4-214ENST00000607020 CMTR2Q8IYT2 770 aaKnown RBP17.32■□□□□ 0.36
SSBP4-214ENST00000607020 ALG13Q9NP73 1137 aaKnown RBP17.32■□□□□ 0.36
SSBP4-214ENST00000607020 SQORQ9Y6N5 450 aa17.32■□□□□ 0.36
SSBP4-214ENST00000607020 PNMA6FA0A0J9YX94 578 aa17.31■□□□□ 0.36
SSBP4-214ENST00000607020 RPLP2P05387 115 aaKnown RBP17.31■□□□□ 0.36
SSBP4-214ENST00000607020 ITGB1P05556 798 aa17.31■□□□□ 0.36
SSBP4-214ENST00000607020 NDUFV1P49821 464 aa17.31■□□□□ 0.36
SSBP4-214ENST00000607020 TSHZ1Q6ZSZ6 1077 aa17.31■□□□□ 0.36
SSBP4-214ENST00000607020 FAM43BQ6ZT52 329 aaPredicted RBP17.31■□□□□ 0.36
SSBP4-214ENST00000607020 FBXL6Q8N531 539 aa17.31■□□□□ 0.36
SSBP4-214ENST00000607020 GIMAP8Q8ND71 665 aaPredicted RBP17.31■□□□□ 0.36
SSBP4-214ENST00000607020 PIGSQ96S52 555 aa17.31■□□□□ 0.36
SSBP4-214ENST00000607020 DNAJB1P25685 340 aa17.3■□□□□ 0.36
SSBP4-214ENST00000607020 GRM4Q14833 912 aa17.3■□□□□ 0.36
SSBP4-214ENST00000607020 UTP14CQ5TAP6 766 aaKnown RBP17.3■□□□□ 0.36
SSBP4-214ENST00000607020 CWC27Q6UX04 472 aaKnown RBP17.3■□□□□ 0.36
SSBP4-214ENST00000607020 SUGP1Q8IWZ8 645 aaKnown RBP17.3■□□□□ 0.36
SSBP4-214ENST00000607020 IRF2BPLQ9H1B7 796 aa17.3■□□□□ 0.36
SSBP4-214ENST00000607020 OSBPL3Q9H4L5 887 aa17.3■□□□□ 0.36
SSBP4-214ENST00000607020 RTEL1Q9NZ71 1219 aa17.3■□□□□ 0.36
SSBP4-214ENST00000607020 TELO2Q9Y4R8 837 aa17.3■□□□□ 0.36
SSBP4-214ENST00000607020 SUPT16HQ9Y5B9 1047 aaKnown RBP17.3■□□□□ 0.36
SSBP4-214ENST00000607020 MRPL42Q9Y6G3 142 aaKnown RBP17.3■□□□□ 0.36
SSBP4-214ENST00000607020 CACNA1HO95180 2353 aa17.29■□□□□ 0.36
SSBP4-214ENST00000607020 HIP1O00291 1037 aa17.29■□□□□ 0.36
SSBP4-214ENST00000607020 CYTH3O43739 400 aa17.29■□□□□ 0.36
SSBP4-214ENST00000607020 MARCH8Q5T0T0 291 aa17.29■□□□□ 0.36
SSBP4-214ENST00000607020 PCNX4Q63HM2 1172 aa17.29■□□□□ 0.36
SSBP4-214ENST00000607020 RTN4RL1Q86UN2 441 aaPredicted RBP17.29■□□□□ 0.36
SSBP4-214ENST00000607020 HOMER1Q86YM7 354 aa17.29■□□□□ 0.36
SSBP4-214ENST00000607020 NPAS4Q8IUM7 802 aa17.29■□□□□ 0.36
SSBP4-214ENST00000607020 PHF7Q9BWX1 381 aaPredicted RBP17.29■□□□□ 0.36
SSBP4-214ENST00000607020 FTHL17Q9BXU8 183 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms