RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 PRAMEF13Q5VWM6 474 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 NSMFQ6X4W1 530 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 EPM2AIP1Q7L775 607 aaPredicted RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 SMAP1Q8IYB5 467 aaPredicted RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 ZNF513Q8N8E2 541 aaPredicted RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 ENAHQ8N8S7 591 aaPredicted RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 ZSCAN18Q8TBC5 510 aaPredicted RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 ATXN2LQ8WWM7 1075 aaKnown RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 USP7Q93009 1102 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 FUBP3Q96I24 572 aaKnown RBP eCLIP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 MENTQ9BUN1 341 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 DUSP23Q9BVJ7 150 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 INO80BQ9C086 356 aaPredicted RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 ZBTB21Q9ULJ3 1066 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 SETD1AO15047 1707 aaKnown RBP4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 KDM5DQ9BY66 1539 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 RTEL1-TNFRSF6BF6WH68 1400 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 M0R2C6 588 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 OPA1O60313 960 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 PIP5K1CO60331 668 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 ITGAVP06756 1048 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 JMJD7P0C870 316 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 SRGNP10124 158 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 PYGMP11217 842 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 KCNA6P17658 529 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 LPOP22079 712 aaPredicted RBP4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 LTKP29376 864 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 ETV3P41162 512 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 SAFBQ15424 915 aaKnown RBP eCLIP4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 NKG7Q16617 165 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 MEX3CQ5U5Q3 659 aaKnown RBP4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 ANO1Q5XXA6 986 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 CDCA2Q69YH5 1023 aaPredicted RBP4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 ARMCX6Q7L4S7 300 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 ANKRD42Q8N9B4 389 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 TEX19Q8NA77 164 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 GJA10Q969M2 543 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 TRMT2BQ96GJ1 504 aaKnown RBP4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 HERPUD2Q9BSE4 406 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 SLC13A1Q9BZW2 595 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 ZHX3Q9H4I2 956 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 AS3MTQ9HBK9 375 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 ANLNQ9NQW6 1124 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 DDX21Q9NR30 783 aaKnown RBP eCLIP4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 NDOR1Q9UHB4 597 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 DDX20Q9UHI6 824 aaKnown RBP4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 GTF2IRD1Q9UHL9 959 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 ANKRD6Q9Y2G4 727 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 SRCAPQ6ZRS2 3230 aa4.83□□□□□ -1.64
IGHV3-29-201ENST00000604817 GPATCH8Q9UKJ3 1502 aaKnown RBP4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 SPATA31A6Q5VVP1 1343 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 ANKRD34BA5PLL1 514 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 EFCAB14O75071 495 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 LEFTY1O75610 366 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 LDHCP07864 332 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 PF4V1P10720 104 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 TYRP1P17643 537 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 CYP7A1P22680 504 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 IGFALSP35858 605 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 CD96P40200 585 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 AFMP43652 599 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 SARSP49591 514 aaKnown RBP4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 ERVK-21P61565 698 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 GTF2H3Q13889 308 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 KRT72Q14CN4 511 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 MLANAQ16655 118 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 CFAP100Q494V2 611 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 ALFQ53S48 1182 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 TMEM240Q5SV17 173 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 HDGFL2Q7Z4V5 671 aaPredicted RBP4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 PPFIBP1Q86W92 1011 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 ZNF227Q86WZ6 799 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 SIAH1Q8IUQ4 282 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 CPXCR1Q8N123 301 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 CPA6Q8N4T0 437 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 OR2W6PQ8NHA6 318 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 CLIP3Q96DZ5 547 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 SLC6A18Q96N87 628 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 NEUROD6Q96NK8 337 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 ORAI3Q9BRQ5 295 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 LGR4Q9BXB1 951 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 ASPNQ9BXN1 380 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 PLCB1Q9NQ66 1216 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 PHTF1Q9UMS5 762 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 PLAGL2Q9UPG8 496 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 APOBEC2Q9Y235 224 aaKnown RBP4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 FAM50BQ9Y247 325 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 IPPQ9Y573 584 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 LRRIQ1Q96JM4 1722 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 SYCP2Q9BX26 1530 aa4.82□□□□□ -1.64
IGHV3-29-201ENST00000604817 ARHGAP35Q9NRY4 1499 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 TMEM94Q12767 1356 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 FRMPD2Q68DX3 1309 aaPredicted RBP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 ZC3H13Q5T200 1668 aaKnown RBP4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 ROBO1Q9Y6N7 1651 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 A0A087WZG4 1122 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 ZNF503-AS2A6NEH8 195 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 CCER2I3L3R5 266 aa4.81□□□□□ -1.64
IGHV3-29-201ENST00000604817 IGF2BP3O00425 579 aaKnown RBP eCLIP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms