RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	UHMK1	Q8TAS1	419 aa	Known RBP	6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	SGSM3	Q96HU1	749 aa		6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	CD248	Q9HCU0	757 aa		6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	ADAM29	Q9UKF5	820 aa		6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	NUB1	Q9Y5A7	615 aa		6.06	□□□□□ -1.44
LAMA4-222	ENST00000604740	KLHL18	O94889	574 aa		6.05	□□□□□ -1.44
LAMA4-222	ENST00000604740	CKM	P06732	381 aa		6.05	□□□□□ -1.44
LAMA4-222	ENST00000604740	TACR2	P21452	398 aa		6.05	□□□□□ -1.44
LAMA4-222	ENST00000604740	NTRK3	Q16288	839 aa		6.05	□□□□□ -1.44
LAMA4-222	ENST00000604740	GPR155	Q7Z3F1	870 aa		6.05	□□□□□ -1.44
LAMA4-222	ENST00000604740	DNER	Q8NFT8	737 aa		6.05	□□□□□ -1.44
LAMA4-222	ENST00000604740	MEGF9	Q9H1U4	602 aa		6.05	□□□□□ -1.44
LAMA4-222	ENST00000604740	ARHGEF4	Q9NR80	690 aa		6.05	□□□□□ -1.44
LAMA4-222	ENST00000604740	ARHGAP20	Q9P2F6	1191 aa		6.05	□□□□□ -1.44
LAMA4-222	ENST00000604740	TCAF1	Q9Y4C2	921 aa		6.05	□□□□□ -1.44
LAMA4-222	ENST00000604740	BLACE	A4D250	179 aa		6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740	NKRF	O15226	690 aa	Known RBP eCLIP	6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740	FGFR1	P11362	822 aa		6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740	PABPC1	P11940	636 aa	Known RBP	6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740	SELENOP	P49908	381 aa		6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740	CD276	Q5ZPR3	534 aa		6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740	NSMF	Q6X4W1	530 aa		6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740		Q6ZUG5	572 aa		6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740	IFNL3	Q8IZI9	196 aa		6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740	STPG3	Q8N7X2	389 aa		6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740	ZFYVE21	Q9BQ24	234 aa		6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740	DSE	Q9UL01	958 aa		6.04	□□□□□ -1.44
LAMA4-222	ENST00000604740	PATE3	B3GLJ2	98 aa		6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	KNG1	P01042	644 aa		6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	SOD2	P04179	222 aa		6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	CHGB	P05060	677 aa		6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	ENO2	P09104	434 aa	Predicted RBP	6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	GDF5	P43026	501 aa		6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	GPR85	P60893	370 aa		6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	PFKP	Q01813	784 aa		6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	IFRD2	Q12894	506 aa	Predicted RBP	6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	STYK1	Q6J9G0	422 aa		6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	IFNL2	Q8IZJ0	200 aa		6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	OSBP2	Q969R2	916 aa		6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	KCND1	Q9NSA2	647 aa		6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	TELO2	Q9Y4R8	837 aa		6.03	□□□□□ -1.44
LAMA4-222	ENST00000604740	TRAV20	A0A0B4J274	112 aa		6.02	□□□□□ -1.45
LAMA4-222	ENST00000604740	FAM47E-STBD1	D6RA91	191 aa		6.02	□□□□□ -1.45
LAMA4-222	ENST00000604740	MUSK	O15146	869 aa		6.02	□□□□□ -1.45
LAMA4-222	ENST00000604740	KLF4	O43474	513 aa		6.02	□□□□□ -1.45
LAMA4-222	ENST00000604740	ZNF623	O75123	536 aa		6.02	□□□□□ -1.45
LAMA4-222	ENST00000604740	CNOT4	O95628	575 aa	Known RBP	6.02	□□□□□ -1.45
LAMA4-222	ENST00000604740	YOD1	Q5VVQ6	348 aa	Predicted RBP	6.02	□□□□□ -1.45
LAMA4-222	ENST00000604740	KCTD1	Q719H9	257 aa		6.02	□□□□□ -1.45
LAMA4-222	ENST00000604740	ST13P5	Q8NFI4	369 aa	Predicted RBP	6.02	□□□□□ -1.45
LAMA4-222	ENST00000604740	TACO1	Q9BSH4	297 aa	Known RBP	6.02	□□□□□ -1.45
LAMA4-222	ENST00000604740	VPS11	Q9H270	941 aa		6.02	□□□□□ -1.45
LAMA4-222	ENST00000604740	ZNF839	A8K0R7	811 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740		H0Y858	1186 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	CSF2RB	P32927	897 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	HABP4	Q5JVS0	413 aa	Known RBP	6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	CRIP3	Q6Q6R5	217 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	LRRC47	Q8N1G4	583 aa	Known RBP	6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740		Q8N1X5	172 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	AJUBA	Q96IF1	538 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	WWC2-AS2	Q96NR7	200 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	GNRHR2	Q96P88	292 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	LRRC37B	Q96QE4	947 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	LMF1	Q96S06	567 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	ALG1	Q9BT22	464 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	CD244	Q9BZW8	370 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	IPPK	Q9H8X2	491 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	SLC4A7	Q9Y6M7	1214 aa		6.01	□□□□□ -1.45
LAMA4-222	ENST00000604740	EPHA5	P54756	1037 aa		6	□□□□□ -1.45
LAMA4-222	ENST00000604740	R3HDM1	Q15032	1099 aa	Known RBP	6	□□□□□ -1.45
LAMA4-222	ENST00000604740	ZNF568	Q3ZCX4	644 aa		6	□□□□□ -1.45
LAMA4-222	ENST00000604740	SPDYA	Q5MJ70	313 aa		6	□□□□□ -1.45
LAMA4-222	ENST00000604740	REXO1L1P	Q8IX06	675 aa		6	□□□□□ -1.45
LAMA4-222	ENST00000604740		Q8TCH9	128 aa		6	□□□□□ -1.45
LAMA4-222	ENST00000604740	SORCS2	Q96PQ0	1159 aa		6	□□□□□ -1.45
LAMA4-222	ENST00000604740	ZNF747	Q9BV97	191 aa		6	□□□□□ -1.45
LAMA4-222	ENST00000604740	SEC61A2	Q9H9S3	476 aa		6	□□□□□ -1.45
LAMA4-222	ENST00000604740	ASXL2	Q76L83	1435 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	ACOT7	O00154	380 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	IL18BP	O95998	194 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	AMH	P03971	560 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	DPH6	Q7L8W6	267 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	ZFPM1	Q8IX07	1006 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	SLC43A3	Q8NBI5	491 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	GML	Q99445	158 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	TRIM55	Q9BYV6	548 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	SEMA4A	Q9H3S1	761 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	SLC39A2	Q9NP94	309 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	PTPN22	Q9Y2R2	807 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	TRAF6	Q9Y4K3	522 aa		5.99	□□□□□ -1.45
LAMA4-222	ENST00000604740	FZD7	O75084	574 aa		5.98	□□□□□ -1.45
LAMA4-222	ENST00000604740	ZNF888	P0CJ79	500 aa	Predicted RBP	5.98	□□□□□ -1.45
LAMA4-222	ENST00000604740	RAB33A	Q14088	237 aa		5.98	□□□□□ -1.45
LAMA4-222	ENST00000604740	USP10	Q14694	798 aa	Known RBP	5.98	□□□□□ -1.45
LAMA4-222	ENST00000604740	HS1BP3	Q53T59	392 aa		5.98	□□□□□ -1.45

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