RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 SETD4Q9NVD3 440 aa20.69■□□□□ 0.9
CCDC12-208ENST00000603885 TMEM260Q9NX78 707 aa20.69■□□□□ 0.9
CCDC12-208ENST00000603885 CYP46A1Q9Y6A2 500 aa20.69■□□□□ 0.9
CCDC12-208ENST00000603885 ESYT2A0FGR8 921 aa20.68■□□□□ 0.9
CCDC12-208ENST00000603885 TREHO43280 583 aa20.68■□□□□ 0.9
CCDC12-208ENST00000603885 EVCP57679 992 aa20.68■□□□□ 0.9
CCDC12-208ENST00000603885 CEP55Q53EZ4 464 aa20.68■□□□□ 0.9
CCDC12-208ENST00000603885 PPP2R2DQ66LE6 453 aa20.68■□□□□ 0.9
CCDC12-208ENST00000603885 PHKBQ93100 1093 aa20.68■□□□□ 0.9
CCDC12-208ENST00000603885 GAS2L1Q99501 681 aaPredicted RBP20.68■□□□□ 0.9
CCDC12-208ENST00000603885 PRDM12Q9H4Q4 367 aa20.68■□□□□ 0.9
CCDC12-208ENST00000603885 C6orf50Q9HD87 102 aa20.68■□□□□ 0.9
CCDC12-208ENST00000603885 JPH1Q9HDC5 661 aaPredicted RBP20.68■□□□□ 0.9
CCDC12-208ENST00000603885 EMSYQ7Z589 1322 aa20.68■□□□□ 0.9
CCDC12-208ENST00000603885 UNC80Q8N2C7 3258 aa20.68■□□□□ 0.9
CCDC12-208ENST00000603885 MYO9BQ13459 2157 aa20.68■□□□□ 0.9
CCDC12-208ENST00000603885 GSTTP1A0A1W2PQM5 241 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 RSPH10B2B2RC85 870 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 CAND2O75155 1236 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 RSPH10BP0C881 870 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 MYOGP15173 224 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 PDIA3P30101 505 aaKnown RBP20.67■□□□□ 0.9
CCDC12-208ENST00000603885 ZNF76P36508 570 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 JAKMIP3Q5VZ66 844 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 MCTP2Q6DN12 878 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 HERC6Q8IVU3 1022 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 CYP2W1Q8TAV3 490 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 GLG1Q92896 1179 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 SDF4Q9BRK5 362 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 RNF26Q9BY78 433 aaPredicted RBP20.67■□□□□ 0.9
CCDC12-208ENST00000603885 TM6SF1Q9BZW5 370 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 ZMYND12Q9H0C1 365 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 ERAP1Q9NZ08 941 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 CHD7Q9P2D1 2997 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 SLC9A2Q9UBY0 812 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 NRCAMQ92823 1304 aa20.67■□□□□ 0.9
CCDC12-208ENST00000603885 ABHD14A-ACY1A0A1B0GW23 586 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 KIF28PB7ZC32 967 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 EFCAB14O75071 495 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 IFNAR1P17181 557 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 WDR5P61964 334 aaKnown RBP20.66■□□□□ 0.9
CCDC12-208ENST00000603885 CCT2P78371 535 aaKnown RBP20.66■□□□□ 0.9
CCDC12-208ENST00000603885 ARHGAP4P98171 946 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 TOB2Q14106 344 aaPredicted RBP20.66■□□□□ 0.9
CCDC12-208ENST00000603885 MBTPS1Q14703 1052 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 NTRK3Q16288 839 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 PKN1Q16512 942 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 REXO1Q8N1G1 1221 aaKnown RBP20.66■□□□□ 0.9
CCDC12-208ENST00000603885 LMBR1Q8WVP7 490 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 SLC26A6Q9BXS9 759 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 SMARCAD1Q9H4L7 1026 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 NFASCO94856 1347 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 PRUNE2Q8WUY3 3088 aa20.66■□□□□ 0.9
CCDC12-208ENST00000603885 MEIS1O00470 390 aa20.65■□□□□ 0.9
CCDC12-208ENST00000603885 LGR5O75473 907 aa20.65■□□□□ 0.9
CCDC12-208ENST00000603885 CA3P07451 260 aa20.65■□□□□ 0.9
CCDC12-208ENST00000603885 ARP10275 920 aa20.65■□□□□ 0.9
CCDC12-208ENST00000603885 MARK3P27448 753 aa20.65■□□□□ 0.9
CCDC12-208ENST00000603885 GNA11P29992 359 aa20.65■□□□□ 0.9
CCDC12-208ENST00000603885 IKBKEQ14164 716 aa20.65■□□□□ 0.9
CCDC12-208ENST00000603885 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.65■□□□□ 0.9
CCDC12-208ENST00000603885 CCDC148Q8NFR7 591 aa20.65■□□□□ 0.9
CCDC12-208ENST00000603885 NCOA5Q9HCD5 579 aaKnown RBP20.65■□□□□ 0.9
CCDC12-208ENST00000603885 AGO4Q9HCK5 861 aaKnown RBP20.65■□□□□ 0.9
CCDC12-208ENST00000603885 KAT6AQ92794 2004 aa20.65■□□□□ 0.9
CCDC12-208ENST00000603885 ADAM17P78536 824 aa20.64■□□□□ 0.89
CCDC12-208ENST00000603885 PPFIA1Q13136 1202 aa20.64■□□□□ 0.89
CCDC12-208ENST00000603885 NIPA1Q7RTP0 329 aa20.64■□□□□ 0.89
CCDC12-208ENST00000603885 BICD2Q8TD16 824 aa20.64■□□□□ 0.89
CCDC12-208ENST00000603885 UPF3BQ9BZI7 483 aaKnown RBP20.64■□□□□ 0.89
CCDC12-208ENST00000603885 AZI2Q9H6S1 392 aa20.64■□□□□ 0.89
CCDC12-208ENST00000603885 PPFIA3O75145 1194 aa20.63■□□□□ 0.89
CCDC12-208ENST00000603885 CENPBP07199 599 aaPredicted RBP20.63■□□□□ 0.89
CCDC12-208ENST00000603885 CTSHP09668 335 aa20.63■□□□□ 0.89
CCDC12-208ENST00000603885 ACTR2P61160 394 aa20.63■□□□□ 0.89
CCDC12-208ENST00000603885 ITGB3BPQ13352 177 aaPredicted RBP20.63■□□□□ 0.89
CCDC12-208ENST00000603885 TCTN1Q2MV58 587 aa20.63■□□□□ 0.89
CCDC12-208ENST00000603885 TRIM22Q8IYM9 498 aa20.63■□□□□ 0.89
CCDC12-208ENST00000603885 ZNF274Q96GC6 653 aaPredicted RBP20.63■□□□□ 0.89
CCDC12-208ENST00000603885 TLL1O43897 1013 aa20.62■□□□□ 0.89
CCDC12-208ENST00000603885 CYP3A4P08684 503 aa20.62■□□□□ 0.89
CCDC12-208ENST00000603885 DEFB103AP81534 67 aa20.62■□□□□ 0.89
CCDC12-208ENST00000603885 GRIK4Q16099 956 aa20.62■□□□□ 0.89
CCDC12-208ENST00000603885 TAF2Q6P1X5 1199 aa20.62■□□□□ 0.89
CCDC12-208ENST00000603885 PLA2G4DQ86XP0 818 aa20.62■□□□□ 0.89
CCDC12-208ENST00000603885 CRYGNQ8WXF5 182 aa20.62■□□□□ 0.89
CCDC12-208ENST00000603885 ZBED2Q9BTP6 218 aa20.62■□□□□ 0.89
CCDC12-208ENST00000603885 PDRG1Q9NUG6 133 aa20.62■□□□□ 0.89
CCDC12-208ENST00000603885 PTPRSQ13332 1948 aa20.61■□□□□ 0.89
CCDC12-208ENST00000603885 FAM86B1E9PN63 330 aa20.61■□□□□ 0.89
CCDC12-208ENST00000603885 CPLX1O14810 134 aa20.61■□□□□ 0.89
CCDC12-208ENST00000603885 ADAMTS3O15072 1205 aa20.61■□□□□ 0.89
CCDC12-208ENST00000603885 FAM86B2P0C5J1 330 aa20.61■□□□□ 0.89
CCDC12-208ENST00000603885 SSRP1Q08945 709 aaKnown RBP20.61■□□□□ 0.89
CCDC12-208ENST00000603885 PLEKHG4Q58EX7 1191 aa20.61■□□□□ 0.89
CCDC12-208ENST00000603885 DBF4BQ8NFT6 615 aa20.61■□□□□ 0.89
CCDC12-208ENST00000603885 TNPO1Q92973 898 aaKnown RBP20.61■□□□□ 0.89
CCDC12-208ENST00000603885 PCYT2Q99447 389 aa20.61■□□□□ 0.89
CCDC12-208ENST00000603885 VPS54Q9P1Q0 977 aa20.61■□□□□ 0.89
CCDC12-208ENST00000603885 TUBE1Q9UJT0 475 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms