RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 DISC1Q9NRI5 854 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 STOML1Q9UBI4 398 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 H0YIN7 160 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 CYP4A11Q02928 519 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 CFAP73A6NFT4 308 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 TNNC2P02585 160 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 SLC4A1P02730 911 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 ALAS1P13196 640 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 BASP1P80723 227 aaKnown RBP9.37□□□□□ -0.91
CSMD1-216ENST00000602557 DTX3LQ8TDB6 740 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 CNTRLQ7Z7A1 2325 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 LRRIQ4A6NIV6 560 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 TMOD1P28289 359 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 MRPL28Q13084 256 aaKnown RBP9.37□□□□□ -0.91
CSMD1-216ENST00000602557 VSTM4Q8IW00 320 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 EHD2Q9NZN4 543 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 H7C1D1 291 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 SGK1O00141 431 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 NEK8Q86SG6 692 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 CASP10Q92851 521 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 ZNF277Q9NRM2 450 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-216ENST00000602557 ATP8A2Q9NTI2 1148 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 GCNT4Q9P109 453 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 DCTN4Q9UJW0 460 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 CAND2O75155 1236 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 EXOC3L4Q17RC7 722 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 MUM1L1Q5H9M0 696 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 CNOT6LQ96LI5 555 aaKnown RBP9.37□□□□□ -0.91
CSMD1-216ENST00000602557 PAGR1Q9BTK6 254 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 HDAC6Q9UBN7 1215 aa9.37□□□□□ -0.91
CSMD1-216ENST00000602557 THRAP3Q9Y2W1 955 aaKnown RBP9.37□□□□□ -0.91
CSMD1-216ENST00000602557 ADCY3O60266 1144 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 CDR2Q01850 454 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 POLA2Q14181 598 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ANGPTL3Q9Y5C1 460 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ANKRD12Q6UB98 2062 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ASPHQ12797 758 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 TBC1D10BQ4KMP7 808 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-216ENST00000602557 TMTC4Q5T4D3 741 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ZBTB8OSQ8IWT0 167 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 TRIML1Q8N9V2 468 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 TMEM60Q9H2L4 133 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 PCDHB4Q9Y5E5 795 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 INHBAP08476 426 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 NOP14P78316 857 aaKnown RBP9.36□□□□□ -0.91
CSMD1-216ENST00000602557 OSBPL9Q96SU4 736 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 POLR3CQ9BUI4 534 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ABCC2Q92887 1545 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 POLR2MP0CAP2 368 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 POLGP54098 1239 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-216ENST00000602557 HACE1Q8IYU2 909 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ING2Q9H160 280 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ANAPC5Q9UJX4 755 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 BZW2Q9Y6E2 419 aaKnown RBP9.36□□□□□ -0.91
CSMD1-216ENST00000602557 EXOC1LA0A1B0GW35 172 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 BTBD18B2RXH4 712 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 H7C0C1 242 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ATP5OP48047 213 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 LRRC36Q1X8D7 754 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 SPATA1Q5VX52 437 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 KLRF2D3W0D1 207 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 DNAJC10Q8IXB1 793 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 EPN3Q9H201 632 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 KIAA1024Q9UPX6 916 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ZNF148Q9UQR1 794 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 H3BRJ5 948 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 M0R2C6 588 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 PGRMC1O00264 195 aaKnown RBP9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ADORA1P30542 326 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 EPHB1P54762 984 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 PPP2R2AP63151 447 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 TRIM60Q495X7 471 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 TRIM59Q8IWR1 403 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ETAA1Q9NY74 926 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 KIAA0232Q92628 1395 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 SFI1A8K8P3 1242 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 LRRN2O75325 713 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ATP1A3P13637 1013 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 AP2B1P63010 937 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 MESDQ14696 234 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ANKRD7Q92527 254 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 MLH3Q9UHC1 1453 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 HNRNPDLO14979 420 aaKnown RBP9.36□□□□□ -0.91
CSMD1-216ENST00000602557 CYP27A1Q02318 531 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 IFNL3Q8IZI9 196 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 PITPNM3Q9BZ71 974 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ZSWIM6Q9HCJ5 1215 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 COL4A3BPQ9Y5P4 624 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 ARHGEF18Q6ZSZ5 1173 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 SH2D3CQ8N5H7 860 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 NEK9Q8TD19 979 aa9.36□□□□□ -0.91
CSMD1-216ENST00000602557 RFX1P22670 979 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 PDZD4Q76G19 769 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 ARHGAP26Q9UNA1 814 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 PCDHA1Q9Y5I3 950 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 A6NJR5 290 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 PPIP5K2O43314 1243 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 DCTN3O75935 186 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 FAM98CQ17RN3 349 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms