RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 SEPT8Q92599 483 aa20.7■□□□□ 0.9
CHMP2A-208ENST00000601220 GPRASP2Q96D09 838 aa20.7■□□□□ 0.9
CHMP2A-208ENST00000601220 ZNF215Q9UL58 517 aaPredicted RBP20.7■□□□□ 0.9
CHMP2A-208ENST00000601220 UBIAD1Q9Y5Z9 338 aa20.7■□□□□ 0.9
CHMP2A-208ENST00000601220 COL4A4P53420 1690 aaPredicted RBP20.7■□□□□ 0.9
CHMP2A-208ENST00000601220 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.69■□□□□ 0.9
CHMP2A-208ENST00000601220 hCG_1642624A0A1W2PR95 340 aa20.69■□□□□ 0.9
CHMP2A-208ENST00000601220 CHRNA1P02708 482 aa20.69■□□□□ 0.9
CHMP2A-208ENST00000601220 ARHGAP4P98171 946 aa20.69■□□□□ 0.9
CHMP2A-208ENST00000601220 SP4Q02446 784 aa20.69■□□□□ 0.9
CHMP2A-208ENST00000601220 TMTC3Q6ZXV5 915 aa20.69■□□□□ 0.9
CHMP2A-208ENST00000601220 RAB11FIP4Q86YS3 637 aa20.69■□□□□ 0.9
CHMP2A-208ENST00000601220 FANCBQ8NB91 859 aa20.69■□□□□ 0.9
CHMP2A-208ENST00000601220 GIMAP8Q8ND71 665 aaPredicted RBP20.69■□□□□ 0.9
CHMP2A-208ENST00000601220 LRRC2Q9BYS8 371 aa20.69■□□□□ 0.9
CHMP2A-208ENST00000601220 NRCAMQ92823 1304 aa20.69■□□□□ 0.9
CHMP2A-208ENST00000601220 CALM1P0DP23 149 aa20.68■□□□□ 0.9
CHMP2A-208ENST00000601220 CALM2P0DP24 149 aa20.68■□□□□ 0.9
CHMP2A-208ENST00000601220 CALM3P0DP25 149 aa20.68■□□□□ 0.9
CHMP2A-208ENST00000601220 TCF7P36402 384 aaPredicted RBP20.68■□□□□ 0.9
CHMP2A-208ENST00000601220 UBE2SQ16763 222 aa20.68■□□□□ 0.9
CHMP2A-208ENST00000601220 RUFY4Q6ZNE9 571 aa20.68■□□□□ 0.9
CHMP2A-208ENST00000601220 SGMS1Q86VZ5 419 aa20.68■□□□□ 0.9
CHMP2A-208ENST00000601220 SLC12A7Q9Y666 1083 aa20.68■□□□□ 0.9
CHMP2A-208ENST00000601220 TCF20Q9UGU0 1960 aaKnown RBP20.67■□□□□ 0.9
CHMP2A-208ENST00000601220 MGAT3Q09327 533 aa20.67■□□□□ 0.9
CHMP2A-208ENST00000601220 MARCH8Q5T0T0 291 aa20.67■□□□□ 0.9
CHMP2A-208ENST00000601220 CCDC82Q8N4S0 544 aa20.67■□□□□ 0.9
CHMP2A-208ENST00000601220 FBXO22Q8NEZ5 403 aa20.67■□□□□ 0.9
CHMP2A-208ENST00000601220 SEPT1Q8WYJ6 367 aa20.67■□□□□ 0.9
CHMP2A-208ENST00000601220 CDHR1Q96JP9 859 aa20.67■□□□□ 0.9
CHMP2A-208ENST00000601220 EHMT1Q9H9B1 1298 aa20.67■□□□□ 0.9
CHMP2A-208ENST00000601220 RAPGEFL1Q9UHV5 662 aa20.67■□□□□ 0.9
CHMP2A-208ENST00000601220 PCDHA6Q9UN73 950 aa20.67■□□□□ 0.9
CHMP2A-208ENST00000601220 PCDHA8Q9Y5H6 950 aa20.67■□□□□ 0.9
CHMP2A-208ENST00000601220 EPC2Q52LR7 807 aa20.66■□□□□ 0.9
CHMP2A-208ENST00000601220 APBB2Q92870 758 aa20.66■□□□□ 0.9
CHMP2A-208ENST00000601220 JADE2Q9NQC1 790 aa20.66■□□□□ 0.9
CHMP2A-208ENST00000601220 MBLAC1A4D2B0 266 aaPredicted RBP20.65■□□□□ 0.9
CHMP2A-208ENST00000601220 MAFGO15525 162 aa20.65■□□□□ 0.9
CHMP2A-208ENST00000601220 EXOSC10Q01780 885 aaKnown RBP20.65■□□□□ 0.9
CHMP2A-208ENST00000601220 FUT2Q10981 343 aa20.65■□□□□ 0.9
CHMP2A-208ENST00000601220 TYW1BQ6NUM6 668 aa20.65■□□□□ 0.9
CHMP2A-208ENST00000601220 PCYT2Q99447 389 aa20.65■□□□□ 0.9
CHMP2A-208ENST00000601220 IFIH1Q9BYX4 1025 aaKnown RBP20.65■□□□□ 0.9
CHMP2A-208ENST00000601220 DOCK5Q9H7D0 1870 aa20.64■□□□□ 0.9
CHMP2A-208ENST00000601220 H3BNC9 293 aa20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 UPP2O95045 317 aa20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 LINC00271P0C7V0 271 aa20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 PPFIA1Q13136 1202 aa20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 MTMR1Q13613 665 aa20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 TAF2Q6P1X5 1199 aa20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 SAMD11Q96NU1 681 aa20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 YME1L1Q96TA2 773 aa20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 UBE2ZQ9H832 354 aaPredicted RBP20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 ANO2Q9NQ90 1003 aa20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 ERAP1Q9NZ08 941 aa20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 MICAL3Q7RTP6 2002 aa20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 COL4A6Q14031 1691 aa20.64■□□□□ 0.89
CHMP2A-208ENST00000601220 SIP14410 1827 aa20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 SPDYE3A6NKU9 549 aa20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 LPIN1Q14693 890 aa20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 GRIK4Q16099 956 aa20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 WWC2Q6AWC2 1192 aa20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 SKAP1Q86WV1 359 aa20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 MICU3Q86XE3 530 aa20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 CYP2W1Q8TAV3 490 aa20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 KHSRPQ92945 711 aaKnown RBP eCLIP20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 MRPL38Q96DV4 380 aaKnown RBP20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 EPHX3Q9H6B9 360 aa20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 RC3H2Q9HBD1 1191 aaKnown RBP20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 CD320Q9NPF0 282 aa20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 PKD2L1Q9P0L9 805 aa20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 BRPF3Q9ULD4 1205 aa20.63■□□□□ 0.89
CHMP2A-208ENST00000601220 CNTNAP5Q8WYK1 1306 aa20.62■□□□□ 0.89
CHMP2A-208ENST00000601220 GHRP10912 638 aa20.62■□□□□ 0.89
CHMP2A-208ENST00000601220 MARK3P27448 753 aa20.62■□□□□ 0.89
CHMP2A-208ENST00000601220 LEXMQ3ZCV2 418 aa20.62■□□□□ 0.89
CHMP2A-208ENST00000601220 APOA5Q6Q788 366 aa20.62■□□□□ 0.89
CHMP2A-208ENST00000601220 HEATR3Q7Z4Q2 680 aa20.62■□□□□ 0.89
CHMP2A-208ENST00000601220 TMEM192Q8IY95 271 aa20.62■□□□□ 0.89
CHMP2A-208ENST00000601220 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.62■□□□□ 0.89
CHMP2A-208ENST00000601220 MXRA8Q9BRK3 442 aa20.62■□□□□ 0.89
CHMP2A-208ENST00000601220 C1QTNF1Q9BXJ1 281 aa20.62■□□□□ 0.89
CHMP2A-208ENST00000601220 SMARCAD1Q9H4L7 1026 aa20.62■□□□□ 0.89
CHMP2A-208ENST00000601220 KCNH7Q9NS40 1196 aa20.62■□□□□ 0.89
CHMP2A-208ENST00000601220 ENPP3O14638 875 aa20.61■□□□□ 0.89
CHMP2A-208ENST00000601220 TSGA10IPQ3SY00 556 aa20.61■□□□□ 0.89
CHMP2A-208ENST00000601220 BMP2KLQ5H9B9 411 aa20.61■□□□□ 0.89
CHMP2A-208ENST00000601220 FBXO47Q5MNV8 452 aa20.61■□□□□ 0.89
CHMP2A-208ENST00000601220 RASEFQ8IZ41 740 aa20.61■□□□□ 0.89
CHMP2A-208ENST00000601220 DNAJB3Q8WWF6 145 aa20.61■□□□□ 0.89
CHMP2A-208ENST00000601220 GLG1Q92896 1179 aa20.61■□□□□ 0.89
CHMP2A-208ENST00000601220 ZBTB10Q96DT7 871 aa20.61■□□□□ 0.89
CHMP2A-208ENST00000601220 RIC8AQ9NPQ8 531 aa20.61■□□□□ 0.89
CHMP2A-208ENST00000601220 FAM217BQ9NTX9 383 aaPredicted RBP20.61■□□□□ 0.89
CHMP2A-208ENST00000601220 TUBE1Q9UJT0 475 aa20.61■□□□□ 0.89
CHMP2A-208ENST00000601220 ARP10275 920 aa20.6■□□□□ 0.89
CHMP2A-208ENST00000601220 INSRRP14616 1297 aa20.6■□□□□ 0.89
CHMP2A-208ENST00000601220 GPM6BQ13491 265 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms