RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 CCNE2O96020 404 aa17.93■□□□□ 0.46
RPS28-203ENST00000600659 EARS2Q5JPH6 523 aaKnown RBP17.93■□□□□ 0.46
RPS28-203ENST00000600659 C16orf59Q7L2K0 433 aa17.93■□□□□ 0.46
RPS28-203ENST00000600659 MBOAT7Q96N66 472 aa17.93■□□□□ 0.46
RPS28-203ENST00000600659 TUT1Q9H6E5 874 aaKnown RBP17.93■□□□□ 0.46
RPS28-203ENST00000600659 JPH1Q9HDC5 661 aaPredicted RBP17.93■□□□□ 0.46
RPS28-203ENST00000600659 LGR5O75473 907 aa17.92■□□□□ 0.46
RPS28-203ENST00000600659 CSF2RAP15509 400 aa17.92■□□□□ 0.46
RPS28-203ENST00000600659 USP11P51784 963 aa17.92■□□□□ 0.46
RPS28-203ENST00000600659 CHMP4BP1P59074 171 aa17.92■□□□□ 0.46
RPS28-203ENST00000600659 ZNF200P98182 395 aaPredicted RBP17.92■□□□□ 0.46
RPS28-203ENST00000600659 SETQ01105 290 aaPredicted RBP17.92■□□□□ 0.46
RPS28-203ENST00000600659 SEPT1Q8WYJ6 367 aa17.92■□□□□ 0.46
RPS28-203ENST00000600659 SLC9A2Q9UBY0 812 aa17.92■□□□□ 0.46
RPS28-203ENST00000600659 EMSYQ7Z589 1322 aa17.92■□□□□ 0.46
RPS28-203ENST00000600659 CYP3A7-CYP3A51PA0A087WV96 503 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 IGKV6D-21A0A0A0MT36 114 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 ATG7O95352 703 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 TDP2O95551 362 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 SUPT20HL2P0C7V6 817 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 SMIM10L2AP0DMW4 78 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 SMIM10L2BP0DMW5 78 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 CYP3A7P24462 503 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 ZNF76P36508 570 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 ACTR2P61160 394 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 ADAM17P78536 824 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 FPGSQ05932 587 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 RBL2Q08999 1139 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 SHHQ15465 462 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 PTGISQ16647 500 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 TRIM71Q2Q1W2 868 aaKnown RBP17.91■□□□□ 0.46
RPS28-203ENST00000600659 PRR16Q569H4 304 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 UTP14CQ5TAP6 766 aaKnown RBP17.91■□□□□ 0.46
RPS28-203ENST00000600659 ZSCAN31Q96LW9 406 aaPredicted RBP17.91■□□□□ 0.46
RPS28-203ENST00000600659 UIMC1Q96RL1 719 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 RNPEPQ9H4A4 650 aa17.91■□□□□ 0.46
RPS28-203ENST00000600659 SH2B1Q9NRF2 756 aaPredicted RBP17.91■□□□□ 0.46
RPS28-203ENST00000600659 CDH23Q9H251 3354 aa17.9■□□□□ 0.46
RPS28-203ENST00000600659 PTPRSQ13332 1948 aa17.9■□□□□ 0.46
RPS28-203ENST00000600659 FAM205CA6NFA0 338 aa17.9■□□□□ 0.46
RPS28-203ENST00000600659 IPO5O00410 1097 aaKnown RBP17.9■□□□□ 0.46
RPS28-203ENST00000600659 CCL23P55773 120 aa17.9■□□□□ 0.46
RPS28-203ENST00000600659 NR5A1Q13285 461 aa17.9■□□□□ 0.46
RPS28-203ENST00000600659 LRIT3Q3SXY7 679 aa17.9■□□□□ 0.46
RPS28-203ENST00000600659 TRAF7Q6Q0C0 670 aa17.9■□□□□ 0.46
RPS28-203ENST00000600659 C7orf31Q8N865 590 aa17.9■□□□□ 0.46
RPS28-203ENST00000600659 WASF1Q92558 559 aa17.9■□□□□ 0.46
RPS28-203ENST00000600659 SCLYQ96I15 445 aa17.9■□□□□ 0.46
RPS28-203ENST00000600659 LLPHQ9BRT6 129 aaKnown RBP17.9■□□□□ 0.46
RPS28-203ENST00000600659 GBF1Q92538 1859 aa17.89■□□□□ 0.45
RPS28-203ENST00000600659 PITPNM1O00562 1244 aa17.89■□□□□ 0.45
RPS28-203ENST00000600659 MSH4O15457 936 aa17.89■□□□□ 0.45
RPS28-203ENST00000600659 MMP1P03956 469 aa17.89■□□□□ 0.45
RPS28-203ENST00000600659 GPNMBQ14956 572 aa17.89■□□□□ 0.45
RPS28-203ENST00000600659 NONOQ15233 471 aaKnown RBP eCLIP17.89■□□□□ 0.45
RPS28-203ENST00000600659 INF2Q27J81 1249 aa17.89■□□□□ 0.45
RPS28-203ENST00000600659 Q4G0T1 1027 aa17.89■□□□□ 0.45
RPS28-203ENST00000600659 TMEM240Q5SV17 173 aa17.89■□□□□ 0.45
RPS28-203ENST00000600659 MOXD1Q6UVY6 613 aa17.89■□□□□ 0.45
RPS28-203ENST00000600659 ABHD15Q6UXT9 468 aa17.89■□□□□ 0.45
RPS28-203ENST00000600659 KRT25Q7Z3Z0 450 aa17.89■□□□□ 0.45
RPS28-203ENST00000600659 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.89■□□□□ 0.453e-13■■■□□ 14.8
RPS28-203ENST00000600659 SDF4Q9BRK5 362 aa17.89■□□□□ 0.45
RPS28-203ENST00000600659 UPF2Q9HAU5 1272 aaKnown RBP17.89■□□□□ 0.45
RPS28-203ENST00000600659 DDX39AO00148 427 aaKnown RBP17.88■□□□□ 0.45
RPS28-203ENST00000600659 ACRP10323 421 aa17.88■□□□□ 0.45
RPS28-203ENST00000600659 XBP1P17861 261 aa17.88■□□□□ 0.45
RPS28-203ENST00000600659 RASIP1Q5U651 963 aa17.88■□□□□ 0.45
RPS28-203ENST00000600659 KRT40Q6A162 431 aa17.88■□□□□ 0.45
RPS28-203ENST00000600659 B3GNT9Q6UX72 402 aa17.88■□□□□ 0.45
RPS28-203ENST00000600659 SERINC5Q86VE9 423 aa17.88■□□□□ 0.45
RPS28-203ENST00000600659 CCDC60Q8IWA6 550 aaPredicted RBP17.88■□□□□ 0.45
RPS28-203ENST00000600659 TMEM199Q8N511 208 aa17.88■□□□□ 0.45
RPS28-203ENST00000600659 ETNPPLQ8TBG4 499 aa17.88■□□□□ 0.45
RPS28-203ENST00000600659 GJA10Q969M2 543 aa17.88■□□□□ 0.45
RPS28-203ENST00000600659 LRCH3Q96II8 777 aa17.88■□□□□ 0.45
RPS28-203ENST00000600659 ZNF577Q9BSK1 485 aa17.88■□□□□ 0.45
RPS28-203ENST00000600659 TREHO43280 583 aa17.87■□□□□ 0.45
RPS28-203ENST00000600659 SLC37A4O43826 429 aa17.87■□□□□ 0.45
RPS28-203ENST00000600659 IQCF3P0C7M6 154 aa17.87■□□□□ 0.45
RPS28-203ENST00000600659 FOSBP53539 338 aa17.87■□□□□ 0.45
RPS28-203ENST00000600659 PTK7Q13308 1070 aa17.87■□□□□ 0.45
RPS28-203ENST00000600659 PPIGQ13427 754 aaKnown RBP eCLIP17.87■□□□□ 0.45
RPS28-203ENST00000600659 PIK3AP1Q6ZUJ8 805 aa17.87■□□□□ 0.45
RPS28-203ENST00000600659 LMBR1Q8WVP7 490 aa17.87■□□□□ 0.45
RPS28-203ENST00000600659 SLC5A5Q92911 643 aa17.87■□□□□ 0.45
RPS28-203ENST00000600659 TMX3Q96JJ7 454 aa17.87■□□□□ 0.45
RPS28-203ENST00000600659 IL23AQ9NPF7 189 aa17.87■□□□□ 0.45
RPS28-203ENST00000600659 SETD4Q9NVD3 440 aa17.87■□□□□ 0.45
RPS28-203ENST00000600659 ZNF215Q9UL58 517 aaPredicted RBP17.87■□□□□ 0.45
RPS28-203ENST00000600659 EVPLQ92817 2033 aa17.86■□□□□ 0.45
RPS28-203ENST00000600659 C17orf102A2RUQ5 167 aa17.86■□□□□ 0.45
RPS28-203ENST00000600659 BTBD18B2RXH4 712 aa17.86■□□□□ 0.45
RPS28-203ENST00000600659 WNT7AO00755 349 aa17.86■□□□□ 0.45
RPS28-203ENST00000600659 ST18O60284 1047 aa17.86■□□□□ 0.45
RPS28-203ENST00000600659 PSMD10O75832 226 aa17.86■□□□□ 0.45
RPS28-203ENST00000600659 ATP4AP20648 1035 aa17.86■□□□□ 0.45
RPS28-203ENST00000600659 MARK3P27448 753 aa17.86■□□□□ 0.45
RPS28-203ENST00000600659 KRT2P35908 639 aa17.86■□□□□ 0.45
RPS28-203ENST00000600659 DIS3L2Q8IYB7 885 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms