RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 F2P00734 622 aa14.71□□□□□ -0.05
SRRM1-223ENST00000600523 GNAT1P11488 350 aa14.71□□□□□ -0.05
SRRM1-223ENST00000600523 PDIA4P13667 645 aaKnown RBP14.71□□□□□ -0.05
SRRM1-223ENST00000600523 SLC26A2P50443 739 aa14.71□□□□□ -0.05
SRRM1-223ENST00000600523 ACTR2P61160 394 aa14.71□□□□□ -0.05
SRRM1-223ENST00000600523 KIAA0753Q2KHM9 967 aa14.71□□□□□ -0.05
SRRM1-223ENST00000600523 ZNF746Q6NUN9 644 aaPredicted RBP14.71□□□□□ -0.05
SRRM1-223ENST00000600523 FAM20AQ96MK3 541 aa14.71□□□□□ -0.05
SRRM1-223ENST00000600523 BRCA2P51587 3418 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 WDR64B1ANS9 1081 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 TBX3O15119 743 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 MSH4O15457 936 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 NEMFO60524 1076 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 PSAPP07602 524 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 SFNP31947 248 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 TRAPPC10P48553 1259 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 CDK7P50613 346 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 ITGB3BPQ13352 177 aaPredicted RBP14.7□□□□□ -0.06
SRRM1-223ENST00000600523 ORC2Q13416 577 aaPredicted RBP14.7□□□□□ -0.06
SRRM1-223ENST00000600523 BECN1Q14457 450 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 CCDC155Q8N6L0 562 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 SLC43A3Q8NBI5 491 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 SLC5A5Q92911 643 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 TNFRSF25Q93038 417 aa14.7□□□□□ -0.06
SRRM1-223ENST00000600523 EMSYQ7Z589 1322 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 MYH7BA7E2Y1 1941 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 RAG1P15918 1043 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 ATP2B1P20020 1258 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 JAK3P52333 1124 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 PRPF38BQ5VTL8 546 aaKnown RBP14.69□□□□□ -0.06
SRRM1-223ENST00000600523 SESTD1Q86VW0 696 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 FAM126BQ8IXS8 530 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 RDM1Q8NG50 284 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 LENG9Q96B70 501 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 MBOAT7Q96N66 472 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 C16orf70Q9BSU1 422 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 BCAS3Q9H6U6 928 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 PCDHA10Q9Y5I2 948 aa14.69□□□□□ -0.06
SRRM1-223ENST00000600523 GSTTP1A0A1W2PQM5 241 aa14.68□□□□□ -0.06
SRRM1-223ENST00000600523 VPS37CA5D8V6 355 aaPredicted RBP14.68□□□□□ -0.06
SRRM1-223ENST00000600523 H0YGN5 161 aa14.68□□□□□ -0.06
SRRM1-223ENST00000600523 U2AF2P26368 475 aaKnown RBP eCLIP14.68□□□□□ -0.062e-9■■□□□ 14.3
SRRM1-223ENST00000600523 STAT5BP51692 787 aa14.68□□□□□ -0.06
SRRM1-223ENST00000600523 CALCRLQ16602 461 aa14.68□□□□□ -0.06
SRRM1-223ENST00000600523 PTGISQ16647 500 aa14.68□□□□□ -0.06
SRRM1-223ENST00000600523 PLPPR4Q7Z2D5 763 aa14.68□□□□□ -0.06
SRRM1-223ENST00000600523 CKAP2LQ8IYA6 745 aa14.68□□□□□ -0.06
SRRM1-223ENST00000600523 KAT2BQ92831 832 aa14.68□□□□□ -0.06
SRRM1-223ENST00000600523 UIMC1Q96RL1 719 aa14.68□□□□□ -0.06
SRRM1-223ENST00000600523 ZNF302Q9NR11 478 aa14.68□□□□□ -0.06
SRRM1-223ENST00000600523 DISC1Q9NRI5 854 aa14.68□□□□□ -0.06
SRRM1-223ENST00000600523 GTF2IRD1Q9UHL9 959 aa14.68□□□□□ -0.06
SRRM1-223ENST00000600523 ZMYND8Q9ULU4 1186 aaPredicted RBP14.68□□□□□ -0.06
SRRM1-223ENST00000600523 C17orf102A2RUQ5 167 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 HAS3O00219 553 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 DHX15O43143 795 aaKnown RBP14.67□□□□□ -0.06
SRRM1-223ENST00000600523 CHMP2AO43633 222 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 SLC37A4O43826 429 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 B4GALT4O60513 344 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 DKC1O60832 514 aaKnown RBP eCLIP14.67□□□□□ -0.06
SRRM1-223ENST00000600523 SYN1P17600 705 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 MCM7P33993 719 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 FAAP100Q0VG06 881 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 BFSP2Q13515 415 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 RILPL1Q5EBL4 403 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 EARS2Q5JPH6 523 aaKnown RBP14.67□□□□□ -0.06
SRRM1-223ENST00000600523 TTC38Q5R3I4 469 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 PDXDC2PQ6P474 469 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 MIER3Q7Z3K6 550 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 TRIM50Q86XT4 487 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 RETREG2Q8NC44 543 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 TRPV6Q9H1D0 765 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 KCNMB3Q9NPA1 279 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 PDLIM7Q9NR12 457 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 PCDHA12Q9UN75 941 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 TRPC6Q9Y210 931 aa14.67□□□□□ -0.06
SRRM1-223ENST00000600523 GRIN2DO15399 1336 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 NRCAMQ92823 1304 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 FAM205CA6NFA0 338 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 RRN3P2A6NIE6 340 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 KIAA0355O15063 1070 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 LGR5O75473 907 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 PSMD10O75832 226 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 ATG7O95352 703 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 CCNE2O96020 404 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 CD4P01730 458 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 SMIM10L2AP0DMW4 78 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 SMIM10L2BP0DMW5 78 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 MARK3P27448 753 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 PPFIA1Q13136 1202 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 SWSAP1Q6NVH7 229 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 ABHD15Q6UXT9 468 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 BRAPQ7Z569 592 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 POTEDQ86YR6 584 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 ETNPPLQ8TBG4 499 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 ATP6V0A1Q93050 837 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 FAM167AQ96KS9 214 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 HIPK3Q9H422 1215 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 TRMT13Q9NUP7 481 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms