RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TLL1O43897 1013 aa18.07■□□□□ 0.48
VRK3-221ENST00000600284 POU3F3P20264 500 aaPredicted RBP18.07■□□□□ 0.48
VRK3-221ENST00000600284 IGFBP4P22692 258 aa18.07■□□□□ 0.48
VRK3-221ENST00000600284 ADD1P35611 737 aaKnown RBP18.07■□□□□ 0.48
VRK3-221ENST00000600284 CLK2P49760 499 aaKnown RBP18.07■□□□□ 0.48
VRK3-221ENST00000600284 APOBRQ0VD83 1088 aa18.07■□□□□ 0.48
VRK3-221ENST00000600284 PFKFB3Q16875 520 aaPredicted RBP18.07■□□□□ 0.48
VRK3-221ENST00000600284 MCTP2Q6DN12 878 aa18.07■□□□□ 0.48
VRK3-221ENST00000600284 RPAINQ86UA6 219 aa18.07■□□□□ 0.48
VRK3-221ENST00000600284 TRIM50Q86XT4 487 aa18.07■□□□□ 0.48
VRK3-221ENST00000600284 BRF1Q92994 677 aa18.07■□□□□ 0.48
VRK3-221ENST00000600284 COL25A1Q9BXS0 654 aaPredicted RBP18.07■□□□□ 0.48
VRK3-221ENST00000600284 SMARCAD1Q9H4L7 1026 aa18.07■□□□□ 0.48
VRK3-221ENST00000600284 KCNH7Q9NS40 1196 aa18.07■□□□□ 0.48
VRK3-221ENST00000600284 ERAP1Q9NZ08 941 aa18.07■□□□□ 0.48
VRK3-221ENST00000600284 TELO2Q9Y4R8 837 aa18.07■□□□□ 0.48
VRK3-221ENST00000600284 NID2Q14112 1375 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 NFASCO94856 1347 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 MYO9BQ13459 2157 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 CPA1P15085 419 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 RPS6KB1P23443 525 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 TAP1Q03518 808 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 CEP55Q53EZ4 464 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 PLEKHG4Q58EX7 1191 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 USP38Q8NB14 1042 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 LMBR1Q8WVP7 490 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 RAD9AQ99638 391 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 ZBED2Q9BTP6 218 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 ANO3Q9BYT9 981 aa18.06■□□□□ 0.48
VRK3-221ENST00000600284 JPH1Q9HDC5 661 aaPredicted RBP18.06■□□□□ 0.48
VRK3-221ENST00000600284 NAP1L2Q9ULW6 460 aaPredicted RBP18.06■□□□□ 0.48
VRK3-221ENST00000600284 ESYT2A0FGR8 921 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 PRPF3O43395 683 aaKnown RBP18.05■□□□□ 0.48
VRK3-221ENST00000600284 GJB5O95377 273 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 SCG2P13521 617 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 SREBF1P36956 1147 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 DEFB103AP81534 67 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 ARHGAP4P98171 946 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 TCTN1Q2MV58 587 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 FAM26DQ5JW98 314 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 TAF2Q6P1X5 1199 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 NIPA1Q7RTP0 329 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 DBF4BQ8NFT6 615 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 CCDC12Q8WUD4 166 aaPredicted RBP18.05■□□□□ 0.48
VRK3-221ENST00000600284 SYMPKQ92797 1274 aaKnown RBP18.05■□□□□ 0.48
VRK3-221ENST00000600284 GLG1Q92896 1179 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 TNPO1Q92973 898 aaKnown RBP18.05■□□□□ 0.48
VRK3-221ENST00000600284 SDF4Q9BRK5 362 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 SLC9A2Q9UBY0 812 aa18.05■□□□□ 0.48
VRK3-221ENST00000600284 MEIS1O00470 390 aa18.04■□□□□ 0.48
VRK3-221ENST00000600284 RPLP2P05387 115 aaKnown RBP18.04■□□□□ 0.48
VRK3-221ENST00000600284 NEFLP07196 543 aa18.04■□□□□ 0.48
VRK3-221ENST00000600284 EVCP57679 992 aa18.04■□□□□ 0.48
VRK3-221ENST00000600284 MKRN4PQ13434 485 aaPredicted RBP18.04■□□□□ 0.48
VRK3-221ENST00000600284 ATXN2LQ8WWM7 1075 aaKnown RBP18.04■□□□□ 0.48
VRK3-221ENST00000600284 SEPT8Q92599 483 aa18.04■□□□□ 0.48
VRK3-221ENST00000600284 ZMYND12Q9H0C1 365 aa18.04■□□□□ 0.48
VRK3-221ENST00000600284 PKD2L1Q9P0L9 805 aa18.04■□□□□ 0.48
VRK3-221ENST00000600284 DOCK5Q9H7D0 1870 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 PRUNE2Q8WUY3 3088 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 RRN3P2A6NIE6 340 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 AMHP03971 560 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 CYP3A4P08684 503 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 GNA11P29992 359 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 PPFIA1Q13136 1202 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 CYP2W1Q8TAV3 490 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 PPM1EQ8WY54 764 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 APBB2Q92870 758 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 PGBD1Q96JS3 809 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 AZI2Q9H6S1 392 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 C6orf50Q9HD87 102 aa18.03■□□□□ 0.48
VRK3-221ENST00000600284 CHD7Q9P2D1 2997 aa18.02■□□□□ 0.48
VRK3-221ENST00000600284 MBLAC1A4D2B0 266 aaPredicted RBP18.02■□□□□ 0.48
VRK3-221ENST00000600284 GTPBP6O43824 516 aaPredicted RBP18.02■□□□□ 0.48
VRK3-221ENST00000600284 ATG7O95352 703 aa18.02■□□□□ 0.48
VRK3-221ENST00000600284 ARP10275 920 aa18.02■□□□□ 0.48
VRK3-221ENST00000600284 ZNF76P36508 570 aa18.02■□□□□ 0.48
VRK3-221ENST00000600284 AKAP17AQ02040 695 aaKnown RBP18.02■□□□□ 0.48
VRK3-221ENST00000600284 PKN1Q16512 942 aa18.02■□□□□ 0.48
VRK3-221ENST00000600284 TJAP1Q5JTD0 557 aa18.02■□□□□ 0.48
VRK3-221ENST00000600284 RUFY3Q7L099 469 aa18.02■□□□□ 0.48
VRK3-221ENST00000600284 PLPPR4Q7Z2D5 763 aa18.02■□□□□ 0.48
VRK3-221ENST00000600284 RSPH3Q86UC2 560 aa18.02■□□□□ 0.48
VRK3-221ENST00000600284 PCYT2Q99447 389 aa18.02■□□□□ 0.48
VRK3-221ENST00000600284 RNF26Q9BY78 433 aaPredicted RBP18.02■□□□□ 0.48
VRK3-221ENST00000600284 TSPYL2Q9H2G4 693 aaPredicted RBP18.02■□□□□ 0.48
VRK3-221ENST00000600284 AGO4Q9HCK5 861 aaKnown RBP18.02■□□□□ 0.48
VRK3-221ENST00000600284 TMEM260Q9NX78 707 aa18.02■□□□□ 0.48
VRK3-221ENST00000600284 INSL6Q9Y581 213 aa18.02■□□□□ 0.48
VRK3-221ENST00000600284 ARHGEF15O94989 841 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 CTSHP09668 335 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 IFNAR1P17181 557 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 MARK3P27448 753 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 PDIA3P30101 505 aaKnown RBP18.01■□□□□ 0.47
VRK3-221ENST00000600284 SLC26A2P50443 739 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 ACTR2P61160 394 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 CCDC85BQ15834 202 aaPredicted RBP18.01■□□□□ 0.47
VRK3-221ENST00000600284 GRIK4Q16099 956 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 NTRK3Q16288 839 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 TMCO2Q7Z6W1 182 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 224.2 ms