RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ZNF286BP0CG31 522 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 ATP2B1P20020 1258 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 SPIRE1Q08AE8 756 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 RESTQ13127 1097 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 HIC1Q14526 733 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 ZNF174Q15697 407 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 NBPF20Q3BBV1 942 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 MCTP1Q6DN14 999 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 ZNF746Q6NUN9 644 aaPredicted RBP15.55■□□□□ 0.08
VRK3-219ENST00000600137 ANKRD33Q7Z3H0 272 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 TRIM50Q86XT4 487 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 FAM20AQ96MK3 541 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 SDF4Q9BRK5 362 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 UNC45AQ9H3U1 944 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.55■□□□□ 0.08
VRK3-219ENST00000600137 CEP290O15078 2479 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 A0A0U1RQG5 324 aaPredicted RBP15.54■□□□□ 0.08
VRK3-219ENST00000600137 H3BRB1 525 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 EML1O00423 815 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 NOP56O00567 594 aaKnown RBP15.54■□□□□ 0.08
VRK3-219ENST00000600137 CD4P01730 458 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 ATP4AP20648 1035 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 MCM7P33993 719 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 PSEN2P49810 448 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 RTP1P59025 263 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 TLE2Q04725 743 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 PKP1Q13835 747 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 TRIM60Q495X7 471 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 TTC38Q5R3I4 469 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 LRCH2Q5VUJ6 765 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 FERMT3Q86UX7 667 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 TOX2Q96NM4 488 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 CTAGE1Q96RT6 745 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 RNPEPQ9H4A4 650 aa15.54■□□□□ 0.08
VRK3-219ENST00000600137 TUT1Q9H6E5 874 aaKnown RBP15.54■□□□□ 0.08
VRK3-219ENST00000600137 TRIP12Q14669 1992 aaPredicted RBP15.54■□□□□ 0.08
VRK3-219ENST00000600137 EMSYQ7Z589 1322 aa15.53■□□□□ 0.08
VRK3-219ENST00000600137 VPS37CA5D8V6 355 aaPredicted RBP15.53■□□□□ 0.08
VRK3-219ENST00000600137 GAS7O60861 476 aa15.53■□□□□ 0.08
VRK3-219ENST00000600137 SUPT20HL2P0C7V6 817 aa15.53■□□□□ 0.08
VRK3-219ENST00000600137 HOXC8P31273 242 aa15.53■□□□□ 0.08
VRK3-219ENST00000600137 KRT76Q01546 638 aa15.53■□□□□ 0.08
VRK3-219ENST00000600137 PPP2R5CQ13362 524 aa15.53■□□□□ 0.08
VRK3-219ENST00000600137 ORC2Q13416 577 aaPredicted RBP15.53■□□□□ 0.08
VRK3-219ENST00000600137 GNL2Q13823 731 aaKnown RBP15.53■□□□□ 0.08
VRK3-219ENST00000600137 MFSD10Q14728 455 aa15.53■□□□□ 0.08
VRK3-219ENST00000600137 UTP14CQ5TAP6 766 aaKnown RBP15.53■□□□□ 0.08
VRK3-219ENST00000600137 FAM173BQ6P4H8 233 aa15.53■□□□□ 0.08
VRK3-219ENST00000600137 SESTD1Q86VW0 696 aa15.53■□□□□ 0.08
VRK3-219ENST00000600137 CCDC60Q8IWA6 550 aaPredicted RBP15.53■□□□□ 0.08
VRK3-219ENST00000600137 FAM126BQ8IXS8 530 aa15.53■□□□□ 0.08
VRK3-219ENST00000600137 TEKT3Q9BXF9 490 aa15.53■□□□□ 0.08
VRK3-219ENST00000600137 ZDHHC9Q9Y397 364 aa15.53■□□□□ 0.08
VRK3-219ENST00000600137 NEMFO60524 1076 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 ADAM17P78536 824 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 MLLT1Q03111 559 aaPredicted RBP15.52■□□□□ 0.08
VRK3-219ENST00000600137 FAAP100Q0VG06 881 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 KIAA0753Q2KHM9 967 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 RILPL1Q5EBL4 403 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 NFRKBQ6P4R8 1299 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 PLPPR4Q7Z2D5 763 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 BRAPQ7Z569 592 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 SMAP1Q8IYB5 467 aaPredicted RBP15.52■□□□□ 0.08
VRK3-219ENST00000600137 AFAP1L1Q8TED9 768 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 VTI1AQ96AJ9 217 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 HTATIP2Q9BUP3 242 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 DISC1Q9NRI5 854 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 HDAC6Q9UBN7 1215 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 NOL7Q9UMY1 257 aaKnown RBP15.52■□□□□ 0.08
VRK3-219ENST00000600137 PCDHA10Q9Y5I2 948 aa15.52■□□□□ 0.08
VRK3-219ENST00000600137 MAFBQ9Y5Q3 323 aaPredicted RBP15.52■□□□□ 0.08
VRK3-219ENST00000600137 MYH9P35579 1960 aaKnown RBP15.51■□□□□ 0.07
VRK3-219ENST00000600137 ZNF862O60290 1169 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 STBD1O95210 358 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 DDIT3P35638 169 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 STAT5BP51692 787 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 PTPN11Q06124 597 aaPredicted RBP15.51■□□□□ 0.07
VRK3-219ENST00000600137 IL17AQ16552 155 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 CALCRLQ16602 461 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 SWSAP1Q6NVH7 229 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 SH3RF1Q7Z6J0 888 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 SLFN12Q8IYM2 578 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 SEZ6LQ9BYH1 1024 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 TRPV6Q9H1D0 765 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 SMARCAD1Q9H4L7 1026 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 PCDH10Q9P2E7 1040 aa15.51■□□□□ 0.07
VRK3-219ENST00000600137 WDR64B1ANS9 1081 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 B4GALT4O60513 344 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 HSP90AA1P07900 732 aaKnown RBP15.5■□□□□ 0.07
VRK3-219ENST00000600137 TXKP42681 527 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 ZNF200P98182 395 aaPredicted RBP15.5■□□□□ 0.07
VRK3-219ENST00000600137 PTGDRQ13258 359 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 BECN1Q14457 450 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 PLCB4Q15147 1175 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 UGCGQ16739 394 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 GDF6Q6KF10 455 aaPredicted RBP15.5■□□□□ 0.07
VRK3-219ENST00000600137 RDM1Q8NG50 284 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 KATNAL1Q9BW62 490 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 TTC12Q9H892 705 aaPredicted RBP15.5■□□□□ 0.07
VRK3-219ENST00000600137 TRMT13Q9NUP7 481 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms