RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 SMAD3P84022 425 aaKnown RBP32.04■■■□□ 2.72
ZNF558-206ENST00000599938 SETQ01105 290 aaPredicted RBP32.04■■■□□ 2.72
ZNF558-206ENST00000599938 ITGB3BPQ13352 177 aaPredicted RBP32.04■■■□□ 2.72
ZNF558-206ENST00000599938 DEFB128Q7Z7B8 93 aa32.04■■■□□ 2.72
ZNF558-206ENST00000599938 IGLV3-22A0A075B6J6 115 aa32.03■■■□□ 2.72
ZNF558-206ENST00000599938 LARGE1O95461 756 aa32.03■■■□□ 2.72
ZNF558-206ENST00000599938 RBL2Q08999 1139 aa32.03■■■□□ 2.72
ZNF558-206ENST00000599938 ME3Q16798 604 aa32.03■■■□□ 2.72
ZNF558-206ENST00000599938 OTOP2Q7RTS6 562 aa32.03■■■□□ 2.72
ZNF558-206ENST00000599938 FAM177A1Q8N128 213 aaPredicted RBP32.03■■■□□ 2.72
ZNF558-206ENST00000599938 NECAB1Q8N987 351 aa32.03■■■□□ 2.72
ZNF558-206ENST00000599938 HERVK_113Q902F9 699 aa32.03■■■□□ 2.72
ZNF558-206ENST00000599938 ATP6V0A1Q93050 837 aa32.03■■■□□ 2.72
ZNF558-206ENST00000599938 GTF3C6Q969F1 213 aa32.03■■■□□ 2.72
ZNF558-206ENST00000599938 SELPP16109 830 aa32.02■■■□□ 2.72
ZNF558-206ENST00000599938 HOXC8P31273 242 aa32.02■■■□□ 2.72
ZNF558-206ENST00000599938 RASIP1Q5U651 963 aa32.02■■■□□ 2.72
ZNF558-206ENST00000599938 Q7L0L9 218 aa32.02■■■□□ 2.72
ZNF558-206ENST00000599938 LRRC8DQ7L1W4 858 aa32.02■■■□□ 2.72
ZNF558-206ENST00000599938 DEFB123Q8N688 67 aa32.02■■■□□ 2.72
ZNF558-206ENST00000599938 GLG1Q92896 1179 aa32.02■■■□□ 2.72
ZNF558-206ENST00000599938 VWCEQ96DN2 955 aa32.02■■■□□ 2.72
ZNF558-206ENST00000599938 EMSYQ7Z589 1322 aa32.01■■■□□ 2.72
ZNF558-206ENST00000599938 CTDNEP1O95476 244 aa32.01■■■□□ 2.71
ZNF558-206ENST00000599938 CKBP12277 381 aa32.01■■■□□ 2.71
ZNF558-206ENST00000599938 MARK3P27448 753 aa32.01■■■□□ 2.71
ZNF558-206ENST00000599938 ACTR2P61160 394 aa32.01■■■□□ 2.71
ZNF558-206ENST00000599938 GALNT17Q6IS24 598 aa32.01■■■□□ 2.71
ZNF558-206ENST00000599938 SERINC5Q86VE9 423 aa32.01■■■□□ 2.71
ZNF558-206ENST00000599938 BLIDQ8IZY5 108 aa32.01■■■□□ 2.71
ZNF558-206ENST00000599938 DAGLBQ8NCG7 672 aa32.01■■■□□ 2.71
ZNF558-206ENST00000599938 WNT8BQ93098 351 aa32.01■■■□□ 2.71
ZNF558-206ENST00000599938 RNPEPQ9H4A4 650 aa32.01■■■□□ 2.71
ZNF558-206ENST00000599938 ERAP1Q9NZ08 941 aa32.01■■■□□ 2.71
ZNF558-206ENST00000599938 DDX39AO00148 427 aaKnown RBP32■■■□□ 2.71
ZNF558-206ENST00000599938 DTNBO60941 627 aa32■■■□□ 2.71
ZNF558-206ENST00000599938 GNAT1P11488 350 aa32■■■□□ 2.71
ZNF558-206ENST00000599938 PRR16Q569H4 304 aa32■■■□□ 2.71
ZNF558-206ENST00000599938 C22orf23Q9BZE7 217 aa32■■■□□ 2.71
ZNF558-206ENST00000599938 SMARCAD1Q9H4L7 1026 aa32■■■□□ 2.71
ZNF558-206ENST00000599938 SETD4Q9NVD3 440 aa32■■■□□ 2.71
ZNF558-206ENST00000599938 ORC3Q9UBD5 711 aaPredicted RBP32■■■□□ 2.71
ZNF558-206ENST00000599938 KAT6AQ92794 2004 aa31.99■■■□□ 2.71
ZNF558-206ENST00000599938 IPO5O00410 1097 aaKnown RBP31.99■■■□□ 2.71
ZNF558-206ENST00000599938 XBP1P17861 261 aa31.99■■■□□ 2.71
ZNF558-206ENST00000599938 TRIM71Q2Q1W2 868 aaKnown RBP31.99■■■□□ 2.71
ZNF558-206ENST00000599938 LMBR1Q8WVP7 490 aa31.99■■■□□ 2.71
ZNF558-206ENST00000599938 UIMC1Q96RL1 719 aa31.99■■■□□ 2.71
ZNF558-206ENST00000599938 ZNF577Q9BSK1 485 aa31.99■■■□□ 2.71
ZNF558-206ENST00000599938 AZI2Q9H6S1 392 aa31.99■■■□□ 2.71
ZNF558-206ENST00000599938 CXXC1Q9P0U4 656 aaPredicted RBP31.99■■■□□ 2.71
ZNF558-206ENST00000599938 KCNJ14Q9UNX9 436 aa31.99■■■□□ 2.71
ZNF558-206ENST00000599938 HSFX4A0A1B0GTS1 333 aaPredicted RBP31.98■■■□□ 2.71
ZNF558-206ENST00000599938 HSFX3A0A1B0GWH4 333 aaPredicted RBP31.98■■■□□ 2.71
ZNF558-206ENST00000599938 TREHO43280 583 aa31.98■■■□□ 2.71
ZNF558-206ENST00000599938 LGR5O75473 907 aa31.98■■■□□ 2.71
ZNF558-206ENST00000599938 CIITAP33076 1130 aa31.98■■■□□ 2.71
ZNF558-206ENST00000599938 NPY5RQ15761 445 aa31.98■■■□□ 2.71
ZNF558-206ENST00000599938 FAM109BQ6ICB4 259 aaPredicted RBP31.98■■■□□ 2.71
ZNF558-206ENST00000599938 FTOQ9C0B1 505 aaKnown RBP eCLIP31.98■■■□□ 2.71
ZNF558-206ENST00000599938 TET1Q8NFU7 2136 aa31.97■■■□□ 2.71
ZNF558-206ENST00000599938 ZBBXA8MT70 800 aa31.97■■■□□ 2.71
ZNF558-206ENST00000599938 PPFIA1Q13136 1202 aa31.97■■■□□ 2.71
ZNF558-206ENST00000599938 ZNF697Q5TEC3 545 aa31.97■■■□□ 2.71
ZNF558-206ENST00000599938 TBCKQ8TEA7 893 aa31.97■■■□□ 2.71
ZNF558-206ENST00000599938 WASF1Q92558 559 aa31.97■■■□□ 2.71
ZNF558-206ENST00000599938 PCYT2Q99447 389 aa31.97■■■□□ 2.71
ZNF558-206ENST00000599938 NRCAMQ92823 1304 aa31.97■■■□□ 2.71
ZNF558-206ENST00000599938 M0R2N6 131 aa31.96■■■□□ 2.71
ZNF558-206ENST00000599938 PARNO95453 639 aaKnown RBP31.96■■■□□ 2.71
ZNF558-206ENST00000599938 CCNE2O96020 404 aa31.96■■■□□ 2.71
ZNF558-206ENST00000599938 ACTN1P12814 892 aa31.96■■■□□ 2.71
ZNF558-206ENST00000599938 THPOP40225 353 aa31.96■■■□□ 2.71
ZNF558-206ENST00000599938 ZNF618Q5T7W0 954 aa31.96■■■□□ 2.71
ZNF558-206ENST00000599938 PHF20Q9BVI0 1012 aa31.96■■■□□ 2.71
ZNF558-206ENST00000599938 USP11P51784 963 aa31.95■■■□□ 2.71
ZNF558-206ENST00000599938 NSUN7Q8NE18 718 aaKnown RBP31.95■■■□□ 2.71
ZNF558-206ENST00000599938 LENG9Q96B70 501 aa31.95■■■□□ 2.71
ZNF558-206ENST00000599938 TCEAL9Q9UHQ7 104 aa31.95■■■□□ 2.71
ZNF558-206ENST00000599938 DHX15O43143 795 aaKnown RBP31.94■■■□□ 2.7
ZNF558-206ENST00000599938 GJB4Q9NTQ9 266 aa31.94■■■□□ 2.7
ZNF558-206ENST00000599938 TBC1D22BQ9NU19 505 aa31.94■■■□□ 2.7
ZNF558-206ENST00000599938 SLC4A7Q9Y6M7 1214 aa31.94■■■□□ 2.7
ZNF558-206ENST00000599938 DNAJB2P25686 324 aa31.93■■■□□ 2.7
ZNF558-206ENST00000599938 NONOQ15233 471 aaKnown RBP eCLIP31.93■■■□□ 2.7
ZNF558-206ENST00000599938 GRIK4Q16099 956 aa31.93■■■□□ 2.7
ZNF558-206ENST00000599938 TRAF7Q6Q0C0 670 aa31.93■■■□□ 2.7
ZNF558-206ENST00000599938 KRT25Q7Z3Z0 450 aa31.93■■■□□ 2.7
ZNF558-206ENST00000599938 FAM161BQ96MY7 647 aa31.93■■■□□ 2.7
ZNF558-206ENST00000599938 KIF2CQ99661 725 aa31.93■■■□□ 2.7
ZNF558-206ENST00000599938 LIMCH1Q9UPQ0 1083 aa31.93■■■□□ 2.7
ZNF558-206ENST00000599938 TRPC6Q9Y210 931 aa31.93■■■□□ 2.7
ZNF558-206ENST00000599938 CDH23Q9H251 3354 aa31.93■■■□□ 2.7
ZNF558-206ENST00000599938 GRXCR1A8MXD5 290 aa31.92■■■□□ 2.7
ZNF558-206ENST00000599938 BACH1O14867 736 aa31.92■■■□□ 2.7
ZNF558-206ENST00000599938 EDIL3O43854 480 aa31.92■■■□□ 2.7
ZNF558-206ENST00000599938 ATG7O95352 703 aa31.92■■■□□ 2.7
ZNF558-206ENST00000599938 STAT5BP51692 787 aa31.92■■■□□ 2.7
ZNF558-206ENST00000599938 ADAM17P78536 824 aa31.92■■■□□ 2.7
ZNF558-206ENST00000599938 PLPPR4Q7Z2D5 763 aa31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms