RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 WDR46O15213 610 aaKnown RBP16.11■□□□□ 0.17
SYMPK-213ENST00000599460 FERP16591 822 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 ATP2C1P98194 919 aaPredicted RBP16.11■□□□□ 0.17
SYMPK-213ENST00000599460 TCP11X2Q5H9J9 407 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 PADI6Q6TGC4 694 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 CCDC105Q8IYK2 499 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 GCNT4Q9P109 453 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 BZW2Q9Y6E2 419 aaKnown RBP16.11■□□□□ 0.17
SYMPK-213ENST00000599460 IPO5O00410 1097 aaKnown RBP16.11■□□□□ 0.17
SYMPK-213ENST00000599460 TFAMQ00059 246 aaKnown RBP16.11■□□□□ 0.17
SYMPK-213ENST00000599460 ZNF280CQ8ND82 737 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 ATP6V0A4Q9HBG4 840 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 GOLGA8IPA6NC78 632 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 GOLGA8JA6NMD2 632 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 K7ERI5 159 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 XPOTO43592 962 aaKnown RBP16.11■□□□□ 0.17
SYMPK-213ENST00000599460 GRIN3BO60391 1043 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 MYL3P08590 195 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 PRR29P0C7W0 189 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 CCDC63Q8NA47 563 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 LPAR1Q92633 364 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
SYMPK-213ENST00000599460 POTEFA5A3E0 1075 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 STK10O94804 968 aaKnown RBP16.1■□□□□ 0.17
SYMPK-213ENST00000599460 POTEIP0CG38 1075 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 FCER1AP12319 257 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 NSFP46459 744 aaKnown RBP16.1■□□□□ 0.17
SYMPK-213ENST00000599460 COG2Q14746 738 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 POTEGQ6S5H5 508 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 POTEEQ6S8J3 1075 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 SFR1Q86XK3 245 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 MTFR1LQ9H019 292 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 KCNK3O14649 394 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 HDLBPQ00341 1268 aaKnown RBP16.1■□□□□ 0.17
SYMPK-213ENST00000599460 RASSF7Q02833 373 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 ATP1A3P13637 1013 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 BPIFB4P59827 614 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 ELF2Q15723 593 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 CCDC14Q49A88 953 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 SHC4Q6S5L8 630 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 ANKRD13CQ8N6S4 541 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 LRRN2O75325 713 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 GAS8O95995 478 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 MYCP01106 439 aaPredicted RBP16.1■□□□□ 0.17
SYMPK-213ENST00000599460 DEFB129Q9H1M3 183 aa16.1■□□□□ 0.17
SYMPK-213ENST00000599460 FAM205CA6NFA0 338 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 NEDD9Q14511 834 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 SCYL2Q6P3W7 929 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 POLD4Q9HCU8 107 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 ZNF302Q9NR11 478 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 P4HBP07237 508 aaKnown RBP16.09■□□□□ 0.17
SYMPK-213ENST00000599460 SFNP31947 248 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 SWSAP1Q6NVH7 229 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 CACTINQ8WUQ7 758 aaKnown RBP16.09■□□□□ 0.17
SYMPK-213ENST00000599460 TCP11Q8WWU5 503 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 FAM49AQ9H0Q0 323 aaPredicted RBP16.09■□□□□ 0.17
SYMPK-213ENST00000599460 NDST4Q9H3R1 872 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 PYCARDQ9ULZ3 195 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 NUB1Q9Y5A7 615 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 CAMTA1Q9Y6Y1 1673 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 C19orf81C9J6K1 198 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 LPXNO60711 386 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 LMNB1P20700 586 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 FAM167AQ96KS9 214 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 RIOK1Q9BRS2 568 aaKnown RBP16.09■□□□□ 0.17
SYMPK-213ENST00000599460 VCPKMTQ9H867 229 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 U2AF2P26368 475 aaKnown RBP eCLIP16.09■□□□□ 0.174e-7■■■■■ 30.7
SYMPK-213ENST00000599460 TGFB2P61812 414 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 KRT31Q15323 416 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 VSTM4Q8IW00 320 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 MSTO1Q9BUK6 570 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 ZSCAN20P17040 1043 aaPredicted RBP16.09■□□□□ 0.17
SYMPK-213ENST00000599460 QARSP47897 775 aaKnown RBP16.09■□□□□ 0.17
SYMPK-213ENST00000599460 DNAJC21Q5F1R6 531 aaKnown RBP16.09■□□□□ 0.17
SYMPK-213ENST00000599460 MAIP1Q8WWC4 291 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 UBE2TQ9NPD8 197 aaPredicted RBP16.09■□□□□ 0.17
SYMPK-213ENST00000599460 VPS18Q9P253 973 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 GABBR1Q9UBS5 961 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 PRR12Q9ULL5 1215 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 HYOU1Q9Y4L1 999 aa16.09■□□□□ 0.17
SYMPK-213ENST00000599460 CAPN9O14815 690 aa16.08■□□□□ 0.17
SYMPK-213ENST00000599460 MXI1P50539 228 aa16.08■□□□□ 0.17
SYMPK-213ENST00000599460 COASYQ13057 564 aa16.08■□□□□ 0.17
SYMPK-213ENST00000599460 TTLL4Q14679 1199 aa16.08■□□□□ 0.17
SYMPK-213ENST00000599460 FAM133AQ8N9E0 248 aa16.08■□□□□ 0.17
SYMPK-213ENST00000599460 RBM46Q8TBY0 533 aaKnown RBP16.08■□□□□ 0.17
SYMPK-213ENST00000599460 NEK9Q8TD19 979 aa16.08■□□□□ 0.17
SYMPK-213ENST00000599460 PRMT6Q96LA8 375 aaPredicted RBP16.08■□□□□ 0.17
SYMPK-213ENST00000599460 RAB20Q9NX57 234 aa16.08■□□□□ 0.17
SYMPK-213ENST00000599460 TRIM49BA6NDI0 452 aa16.08■□□□□ 0.16
SYMPK-213ENST00000599460 KIAA1524Q8TCG1 905 aa16.08■□□□□ 0.16
SYMPK-213ENST00000599460 THAP12O43422 761 aa16.08■□□□□ 0.16
SYMPK-213ENST00000599460 POLR2BP30876 1174 aaKnown RBP16.08■□□□□ 0.16
SYMPK-213ENST00000599460 IFRD2Q12894 506 aaPredicted RBP16.08■□□□□ 0.16
SYMPK-213ENST00000599460 UAP1Q16222 522 aaPredicted RBP16.08■□□□□ 0.16
SYMPK-213ENST00000599460 PPP1R21Q6ZMI0 780 aa16.08■□□□□ 0.16
SYMPK-213ENST00000599460 ZNF710Q8N1W2 664 aa16.08■□□□□ 0.16
SYMPK-213ENST00000599460 MCPH1Q8NEM0 835 aa16.08■□□□□ 0.16
SYMPK-213ENST00000599460 LXNQ9BS40 222 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms