RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 RFC2P35250 354 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 TCF7P36402 384 aaPredicted RBP11.05□□□□□ -0.64
VRK3-215ENST00000599138 NLRP5P59047 1200 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 ADAM17P78536 824 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 SMAD3P84022 425 aaKnown RBP11.05□□□□□ -0.64
VRK3-215ENST00000599138 ZNF200P98182 395 aaPredicted RBP11.05□□□□□ -0.64
VRK3-215ENST00000599138 SP4Q02446 784 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 PTK7Q13308 1070 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 FAM109BQ6ICB4 259 aaPredicted RBP11.05□□□□□ -0.64
VRK3-215ENST00000599138 GALNT17Q6IS24 598 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 TRAF7Q6Q0C0 670 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 SERINC5Q86VE9 423 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 RPUSD2Q8IZ73 545 aaKnown RBP11.05□□□□□ -0.64
VRK3-215ENST00000599138 HERVK_113Q902F9 699 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 WNT8BQ93098 351 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 GTF3C6Q969F1 213 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 LENG9Q96B70 501 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 PCYT2Q99447 389 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 RNPEPQ9H4A4 650 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 PKD2L1Q9P0L9 805 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 SLC9A2Q9UBY0 812 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 NOD1Q9Y239 953 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 EMSYQ7Z589 1322 aa11.05□□□□□ -0.64
VRK3-215ENST00000599138 C17orf102A2RUQ5 167 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 ATG7O95352 703 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 FGBP02675 491 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 PFKMP08237 780 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 FDPSP14324 419 aaKnown RBP11.04□□□□□ -0.64
VRK3-215ENST00000599138 ZNF76P36508 570 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 RBM25P49756 843 aaKnown RBP11.04□□□□□ -0.64
VRK3-215ENST00000599138 USP11P51784 963 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 ACTR2P61160 394 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 ST3GAL1Q11201 340 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 GPNMBQ14956 572 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 UTP14CQ5TAP6 766 aaKnown RBP11.04□□□□□ -0.64
VRK3-215ENST00000599138 PLA2G4DQ86XP0 818 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 BLIDQ8IZY5 108 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 CCDC155Q8N6L0 562 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 NECAB1Q8N987 351 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 RETREG2Q8NC44 543 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 AFAP1L1Q8TED9 768 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 SDF4Q9BRK5 362 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 PHF20Q9BVI0 1012 aa11.04□□□□□ -0.64
VRK3-215ENST00000599138 ZNF215Q9UL58 517 aaPredicted RBP11.04□□□□□ -0.64
VRK3-215ENST00000599138 WDR81Q562E7 1941 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 MYH9P35579 1960 aaKnown RBP11.03□□□□□ -0.64
VRK3-215ENST00000599138 IGKV6D-21A0A0A0MT36 114 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.03□□□□□ -0.64
VRK3-215ENST00000599138 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.03□□□□□ -0.64
VRK3-215ENST00000599138 IPO5O00410 1097 aaKnown RBP11.03□□□□□ -0.64
VRK3-215ENST00000599138 TREHO43280 583 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 CCNE2O96020 404 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 CKBP12277 381 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 SELPP16109 830 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 SETQ01105 290 aaPredicted RBP11.03□□□□□ -0.64
VRK3-215ENST00000599138 NSUN7Q8NE18 718 aaKnown RBP11.03□□□□□ -0.64
VRK3-215ENST00000599138 ATP6V0A1Q93050 837 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 C22orf23Q9BZE7 217 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 SMARCAD1Q9H4L7 1026 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 SETD4Q9NVD3 440 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 ERAP1Q9NZ08 941 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 CXXC1Q9P0U4 656 aaPredicted RBP11.03□□□□□ -0.64
VRK3-215ENST00000599138 ORC3Q9UBD5 711 aaPredicted RBP11.03□□□□□ -0.64
VRK3-215ENST00000599138 NRCAMQ92823 1304 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 CDH23Q9H251 3354 aa11.03□□□□□ -0.64
VRK3-215ENST00000599138 CHD9Q3L8U1 2897 aa11.02□□□□□ -0.64
VRK3-215ENST00000599138 CYP3A7-CYP3A51PA0A087WV96 503 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 MBLAC1A4D2B0 266 aaPredicted RBP11.02□□□□□ -0.65
VRK3-215ENST00000599138 DTNBO60941 627 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.65
VRK3-215ENST00000599138 CXCL10P02778 98 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 GNAT1P11488 350 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 CYP3A7P24462 503 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 MBTPS1Q14703 1052 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 PRR16Q569H4 304 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 ABHD15Q6UXT9 468 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 LRRC8DQ7L1W4 858 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 PLPPR4Q7Z2D5 763 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 TBCKQ8TEA7 893 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 LMBR1Q8WVP7 490 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 WASF1Q92558 559 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 MBOAT7Q96N66 472 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 ZNF577Q9BSK1 485 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 TBC1D22BQ9NU19 505 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 KCNJ14Q9UNX9 436 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 LIMCH1Q9UPQ0 1083 aa11.02□□□□□ -0.65
VRK3-215ENST00000599138 MSH4O15457 936 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 NBNO60934 754 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 CAND2O75155 1236 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 XBP1P17861 261 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 STAT5BP51692 787 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 Q4G0T1 1027 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 MARCH8Q5T0T0 291 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 ZNF618Q5T7W0 954 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 ZNF746Q6NUN9 644 aaPredicted RBP11.01□□□□□ -0.65
VRK3-215ENST00000599138 MOXD1Q6UVY6 613 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 Q7L0L9 218 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 OTOP2Q7RTS6 562 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 KRT25Q7Z3Z0 450 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 DEFB128Q7Z7B8 93 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms