RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 ZNF76P36508 570 aa20.04■□□□□ 0.8
USHBP1-209ENST00000598570 ACTR2P61160 394 aa20.04■□□□□ 0.8
USHBP1-209ENST00000598570 HMGN5P82970 282 aaKnown RBP20.04■□□□□ 0.8
USHBP1-209ENST00000598570 MDM2Q00987 491 aaPredicted RBP20.04■□□□□ 0.8
USHBP1-209ENST00000598570 NONOQ15233 471 aaKnown RBP eCLIP20.04■□□□□ 0.8
USHBP1-209ENST00000598570 TRIM71Q2Q1W2 868 aaKnown RBP20.04■□□□□ 0.8
USHBP1-209ENST00000598570 ABHD15Q6UXT9 468 aa20.04■□□□□ 0.8
USHBP1-209ENST00000598570 C16orf59Q7L2K0 433 aa20.04■□□□□ 0.8
USHBP1-209ENST00000598570 PLPPR4Q7Z2D5 763 aa20.04■□□□□ 0.8
USHBP1-209ENST00000598570 CCDC83Q8IWF9 413 aa20.04■□□□□ 0.8
USHBP1-209ENST00000598570 SLC5A5Q92911 643 aa20.04■□□□□ 0.8
USHBP1-209ENST00000598570 RIT2Q99578 217 aa20.04■□□□□ 0.8
USHBP1-209ENST00000598570 SDF4Q9BRK5 362 aa20.04■□□□□ 0.8
USHBP1-209ENST00000598570 MSH4O15457 936 aa20.03■□□□□ 0.8
USHBP1-209ENST00000598570 EPHB4P54760 987 aa20.03■□□□□ 0.8
USHBP1-209ENST00000598570 LRIT3Q3SXY7 679 aa20.03■□□□□ 0.8
USHBP1-209ENST00000598570 AFAP1L1Q8TED9 768 aa20.03■□□□□ 0.8
USHBP1-209ENST00000598570 WNT8AQ9H1J5 351 aa20.03■□□□□ 0.8
USHBP1-209ENST00000598570 HIPK3Q9H422 1215 aa20.03■□□□□ 0.8
USHBP1-209ENST00000598570 SMARCAD1Q9H4L7 1026 aa20.03■□□□□ 0.8
USHBP1-209ENST00000598570 PRDM5Q9NQX1 630 aaPredicted RBP20.03■□□□□ 0.8
USHBP1-209ENST00000598570 LAMA2P24043 3122 aaKnown RBP20.03■□□□□ 0.8
USHBP1-209ENST00000598570 LAMA3Q16787 3333 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 SORBS3O60504 671 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 PTK7Q13308 1070 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 PTGISQ16647 500 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 PRR16Q569H4 304 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 EARS2Q5JPH6 523 aaKnown RBP20.02■□□□□ 0.8
USHBP1-209ENST00000598570 RASIP1Q5U651 963 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 KRT40Q6A162 431 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 ZNF746Q6NUN9 644 aaPredicted RBP20.02■□□□□ 0.8
USHBP1-209ENST00000598570 SERINC5Q86VE9 423 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 TDHQ8IZJ6 230 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 C7orf31Q8N865 590 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 FBXO18Q8NFZ0 1043 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 ETNPPLQ8TBG4 499 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 DHX38Q92620 1227 aaKnown RBP20.02■□□□□ 0.8
USHBP1-209ENST00000598570 TMX3Q96JJ7 454 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 ZNF577Q9BSK1 485 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 UBE2OQ9C0C9 1292 aaKnown RBP20.02■□□□□ 0.8
USHBP1-209ENST00000598570 RNPEPQ9H4A4 650 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 PCDH10Q9P2E7 1040 aa20.02■□□□□ 0.8
USHBP1-209ENST00000598570 WDR81Q562E7 1941 aa20.02■□□□□ 0.79
USHBP1-209ENST00000598570 PSMD10O75832 226 aa20.01■□□□□ 0.79
USHBP1-209ENST00000598570 SMIM10L2AP0DMW4 78 aa20.01■□□□□ 0.79
USHBP1-209ENST00000598570 SMIM10L2BP0DMW5 78 aa20.01■□□□□ 0.79
USHBP1-209ENST00000598570 GCFC2P16383 781 aaKnown RBP20.01■□□□□ 0.79
USHBP1-209ENST00000598570 SLC26A2P50443 739 aa20.01■□□□□ 0.79
USHBP1-209ENST00000598570 FPGSQ05932 587 aa20.01■□□□□ 0.79
USHBP1-209ENST00000598570 RPAINQ86UA6 219 aa20.01■□□□□ 0.79
USHBP1-209ENST00000598570 CAGE1Q8TC20 777 aa20.01■□□□□ 0.79
USHBP1-209ENST00000598570 ERAP1Q9NZ08 941 aa20.01■□□□□ 0.79
USHBP1-209ENST00000598570 ZNF215Q9UL58 517 aaPredicted RBP20.01■□□□□ 0.79
USHBP1-209ENST00000598570 UMODL1Q5DID0 1318 aa20.01■□□□□ 0.79
USHBP1-209ENST00000598570 MBLAC1A4D2B0 266 aaPredicted RBP20■□□□□ 0.79
USHBP1-209ENST00000598570 CYP2C9P11712 490 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 CYP2C18P33260 490 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 KRT2P35908 639 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 NR5A1Q13285 461 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 GPNMBQ14956 572 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 INF2Q27J81 1249 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 TRAF7Q6Q0C0 670 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 NEK8Q86SG6 692 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 TRIM50Q86XT4 487 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 SMAP1Q8IYB5 467 aaPredicted RBP20■□□□□ 0.79
USHBP1-209ENST00000598570 TMEM199Q8N511 208 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 KCNMB3Q9NPA1 279 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 MAFBQ9Y5Q3 323 aaPredicted RBP20■□□□□ 0.79
USHBP1-209ENST00000598570 KAT6AQ92794 2004 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 NRCAMQ92823 1304 aa20■□□□□ 0.79
USHBP1-209ENST00000598570 CCDC194A0A1B0GVG4 234 aa19.99■□□□□ 0.79
USHBP1-209ENST00000598570 BTBD18B2RXH4 712 aa19.99■□□□□ 0.79
USHBP1-209ENST00000598570 TBX3O15119 743 aa19.99■□□□□ 0.79
USHBP1-209ENST00000598570 TDP2O95551 362 aa19.99■□□□□ 0.79
USHBP1-209ENST00000598570 RFC2P35250 354 aa19.99■□□□□ 0.79
USHBP1-209ENST00000598570 KRT76Q01546 638 aa19.99■□□□□ 0.79
USHBP1-209ENST00000598570 PPIGQ13427 754 aaKnown RBP eCLIP19.99■□□□□ 0.79
USHBP1-209ENST00000598570 CUL4AQ13619 759 aa19.99■□□□□ 0.79
USHBP1-209ENST00000598570 FAM47CQ5HY64 1035 aa19.99■□□□□ 0.79
USHBP1-209ENST00000598570 MARCH8Q5T0T0 291 aa19.99■□□□□ 0.79
USHBP1-209ENST00000598570 PPP1R13LQ8WUF5 828 aa19.99■□□□□ 0.79
USHBP1-209ENST00000598570 FAM20AQ96MK3 541 aa19.99■□□□□ 0.79
USHBP1-209ENST00000598570 NAP1L4Q99733 375 aaKnown RBP19.99■□□□□ 0.79
USHBP1-209ENST00000598570 PKD2L1Q9P0L9 805 aa19.99■□□□□ 0.79
USHBP1-209ENST00000598570 IQCF3P0C7M6 154 aa19.98■□□□□ 0.79
USHBP1-209ENST00000598570 CSF2RAP15509 400 aa19.98■□□□□ 0.79
USHBP1-209ENST00000598570 FXR1P51114 621 aaKnown RBP eCLIP19.98■□□□□ 0.79
USHBP1-209ENST00000598570 STAT5BP51692 787 aa19.98■□□□□ 0.79
USHBP1-209ENST00000598570 ZNF200P98182 395 aaPredicted RBP19.98■□□□□ 0.79
USHBP1-209ENST00000598570 BFSP2Q13515 415 aa19.98■□□□□ 0.79
USHBP1-209ENST00000598570 SHHQ15465 462 aa19.98■□□□□ 0.79
USHBP1-209ENST00000598570 DIS3L2Q8IYB7 885 aaKnown RBP19.98■□□□□ 0.79
USHBP1-209ENST00000598570 RDM1Q8NG50 284 aa19.98■□□□□ 0.79
USHBP1-209ENST00000598570 FOXP1Q9H334 677 aaPredicted RBP19.98■□□□□ 0.79
USHBP1-209ENST00000598570 IL23AQ9NPF7 189 aa19.98■□□□□ 0.79
USHBP1-209ENST00000598570 C17orf102A2RUQ5 167 aa19.97■□□□□ 0.79
USHBP1-209ENST00000598570 CAND2O75155 1236 aa19.97■□□□□ 0.79
USHBP1-209ENST00000598570 PARNO95453 639 aaKnown RBP19.97■□□□□ 0.79
USHBP1-209ENST00000598570 GNAT1P11488 350 aa19.97■□□□□ 0.79
USHBP1-209ENST00000598570 ATP4AP20648 1035 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms