RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 NNTQ13423 1086 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 KCNB1Q14721 858 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 DYDC1Q8WWB3 177 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 CTTNBP2NLQ9P2B4 639 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 HPCAL4Q9UM19 191 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 SPATA31A5Q5VU36 1347 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 SPATA31A7Q8IWB4 1347 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 MMP10P09238 476 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 TCP1P17987 556 aaKnown RBP13.6□□□□□ -0.23
USHBP1-207ENST00000597928 TNFAIP3P21580 790 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 CHRNA5P30532 468 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 ABCB5Q2M3G0 1257 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 ODR4Q5SWX8 454 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 ALKBH5Q6P6C2 394 aaKnown RBP13.6□□□□□ -0.23
USHBP1-207ENST00000597928 NSMFQ6X4W1 530 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 CCDC170Q8IYT3 715 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 BANK1Q8NDB2 785 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 FAM212AQ96EL1 285 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 PAIP2Q9BPZ3 127 aaKnown RBP13.6□□□□□ -0.23
USHBP1-207ENST00000597928 TMEM51Q9NW97 253 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 SALL4Q9UJQ4 1053 aa13.6□□□□□ -0.23
USHBP1-207ENST00000597928 KDM4FA0A1W2PPD8 638 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 F5H6K3 240 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 ZBTB5O15062 677 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 GAS7O60861 476 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 MED24O75448 989 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 CTNNA1P35221 906 aaKnown RBP13.59□□□□□ -0.23
USHBP1-207ENST00000597928 CASP5P51878 434 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 SEC24CP53992 1094 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 ARHGAP4P98171 946 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 KLRC3Q07444 240 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 DHX9Q08211 1270 aaKnown RBP13.59□□□□□ -0.23
USHBP1-207ENST00000597928 KRT71Q3SY84 523 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 TTC31Q49AM3 519 aaPredicted RBP13.59□□□□□ -0.23
USHBP1-207ENST00000597928 ASPRV1Q53RT3 343 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 CCNI2Q6ZMN8 369 aaPredicted RBP13.59□□□□□ -0.23
USHBP1-207ENST00000597928 CAPN12Q6ZSI9 719 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 C16orf86Q6ZW13 317 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 GLYCTKQ8IVS8 523 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 OTUD6BQ8N6M0 293 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 TBC1D22AQ8WUA7 517 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 HOOK2Q96ED9 719 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 ITIH6Q6UXX5 1313 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
USHBP1-207ENST00000597928 GOLGA6L7A0A1B0GV03 622 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 LAD1O00515 517 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 FAM153BP0C7A2 387 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 NBPF9Q3BBW0 867 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 FAM153CQ494X1 144 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 CELF4Q9BZC1 486 aaKnown RBP13.59□□□□□ -0.23
USHBP1-207ENST00000597928 STIM2Q9P246 746 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 FAM153AQ9UHL3 310 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 ATP8A1Q9Y2Q0 1164 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 RABGAP1Q9Y3P9 1069 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 SCN11AQ9UI33 1791 aa13.59□□□□□ -0.23
USHBP1-207ENST00000597928 A0A1W2PQC6 194 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 ATP8B1O43520 1251 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 IFNAR2P48551 515 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 TNNC1P63316 161 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 ZNF543Q08ER8 600 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 TUBB2AQ13885 445 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 TMEM132AQ24JP5 1023 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 HAUS3Q68CZ6 603 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 CDC42EP5Q6NZY7 148 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 BICD1Q96G01 975 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 DNAJC7Q99615 494 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 C7orf25Q9BPX7 421 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 TUBB2BQ9BVA1 445 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 AMACRQ9UHK6 382 aa13.58□□□□□ -0.23
USHBP1-207ENST00000597928 FAM178BQ8IXR5 827 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 FAM84AQ96KN4 292 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 SPZ1Q9BXG8 430 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 ADAM33Q9BZ11 813 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 SH2D4AQ9H788 454 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 ARHGEF35A5YM69 484 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 APBA3O96018 575 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 CRKP46108 304 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 MESDQ14696 234 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 TRIP13Q15645 432 aaPredicted RBP13.58□□□□□ -0.24
USHBP1-207ENST00000597928 MIIPQ5JXC2 388 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 PDXDC1Q6P996 788 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 NT5C3AQ9H0P0 336 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 LRRC4BQ9NT99 713 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 TMOD4Q9NZQ9 345 aa13.58□□□□□ -0.24
USHBP1-207ENST00000597928 GSTTP1A0A1W2PQM5 241 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 GLI1P08151 1106 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 KRT5P13647 590 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 SNX1Q13596 522 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 LRCH2Q5VUJ6 765 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 PPM1KQ8N3J5 372 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 GUF1Q8N442 669 aaKnown RBP13.57□□□□□ -0.24
USHBP1-207ENST00000597928 ZNF507Q8TCN5 953 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 REEP2Q9BRK0 252 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.57□□□□□ -0.24
USHBP1-207ENST00000597928 MLXIPLQ9NP71 852 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 STK17AQ9UEE5 414 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 FAM184BQ9ULE4 1060 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
USHBP1-207ENST00000597928 ATRNO75882 1429 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 DDTLA6NHG4 134 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms