RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 AP3B2Q13367 1082 aa17.22■□□□□ 0.35
LIG1-215ENST00000597901 TOB2Q14106 344 aaPredicted RBP17.22■□□□□ 0.35
LIG1-215ENST00000597901 MBTPS1Q14703 1052 aa17.22■□□□□ 0.35
LIG1-215ENST00000597901 CEP55Q53EZ4 464 aa17.22■□□□□ 0.35
LIG1-215ENST00000597901 JAKMIP3Q5VZ66 844 aa17.22■□□□□ 0.35
LIG1-215ENST00000597901 SLC9A7Q96T83 725 aa17.22■□□□□ 0.35
LIG1-215ENST00000597901 ZMYND12Q9H0C1 365 aa17.22■□□□□ 0.35
LIG1-215ENST00000597901 C6orf50Q9HD87 102 aa17.22■□□□□ 0.35
LIG1-215ENST00000597901 ADAMTS3O15072 1205 aa17.21■□□□□ 0.35
LIG1-215ENST00000597901 PPFIA3O75145 1194 aa17.21■□□□□ 0.35
LIG1-215ENST00000597901 IFNAR1P17181 557 aa17.21■□□□□ 0.35
LIG1-215ENST00000597901 ZNF76P36508 570 aa17.21■□□□□ 0.35
LIG1-215ENST00000597901 SREBF1P36956 1147 aa17.21■□□□□ 0.35
LIG1-215ENST00000597901 ADAM17P78536 824 aa17.21■□□□□ 0.35
LIG1-215ENST00000597901 TCTN1Q2MV58 587 aa17.21■□□□□ 0.35
LIG1-215ENST00000597901 CNKSR3Q6P9H4 555 aa17.21■□□□□ 0.35
LIG1-215ENST00000597901 GAS2L1Q99501 681 aaPredicted RBP17.21■□□□□ 0.35
LIG1-215ENST00000597901 SMARCAD1Q9H4L7 1026 aa17.21■□□□□ 0.35
LIG1-215ENST00000597901 PRDM12Q9H4Q4 367 aa17.21■□□□□ 0.35
LIG1-215ENST00000597901 NCOA5Q9HCD5 579 aaKnown RBP17.21■□□□□ 0.35
LIG1-215ENST00000597901 LAMA2P24043 3122 aaKnown RBP17.21■□□□□ 0.34
LIG1-215ENST00000597901 NID2Q14112 1375 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 ABHD14A-ACY1A0A1B0GW23 586 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 RBAK-RBAKDNI3L0D1 243 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 ARHGAP4P98171 946 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 IKBKEQ14164 716 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 MCTP2Q6DN12 878 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 HERC6Q8IVU3 1022 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 CCDC12Q8WUD4 166 aaPredicted RBP17.2■□□□□ 0.34
LIG1-215ENST00000597901 GLG1Q92896 1179 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 ZNF274Q96GC6 653 aaPredicted RBP17.2■□□□□ 0.34
LIG1-215ENST00000597901 LARP6Q9BRS8 491 aaKnown RBP17.2■□□□□ 0.34
LIG1-215ENST00000597901 SLC26A6Q9BXS9 759 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 RNF26Q9BY78 433 aaPredicted RBP17.2■□□□□ 0.34
LIG1-215ENST00000597901 AGO4Q9HCK5 861 aaKnown RBP17.2■□□□□ 0.34
LIG1-215ENST00000597901 ERAP1Q9NZ08 941 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 SLC9A2Q9UBY0 812 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 NRCAMQ92823 1304 aa17.2■□□□□ 0.34
LIG1-215ENST00000597901 MYH7BA7E2Y1 1941 aa17.19■□□□□ 0.34
LIG1-215ENST00000597901 KIF28PB7ZC32 967 aa17.19■□□□□ 0.34
LIG1-215ENST00000597901 LGR5O75473 907 aa17.19■□□□□ 0.34
LIG1-215ENST00000597901 CYP3A4P08684 503 aa17.19■□□□□ 0.34
LIG1-215ENST00000597901 GNA11P29992 359 aa17.19■□□□□ 0.34
LIG1-215ENST00000597901 KCNJ6P48051 423 aa17.19■□□□□ 0.34
LIG1-215ENST00000597901 LMBR1Q8WVP7 490 aa17.19■□□□□ 0.34
LIG1-215ENST00000597901 CRYGNQ8WXF5 182 aa17.19■□□□□ 0.34
LIG1-215ENST00000597901 PCYT2Q99447 389 aa17.19■□□□□ 0.34
LIG1-215ENST00000597901 SDF4Q9BRK5 362 aa17.19■□□□□ 0.34
LIG1-215ENST00000597901 UPF3BQ9BZI7 483 aaKnown RBP17.19■□□□□ 0.34
LIG1-215ENST00000597901 JPH1Q9HDC5 661 aaPredicted RBP17.19■□□□□ 0.34
LIG1-215ENST00000597901 NFASCO94856 1347 aa17.19■□□□□ 0.34
LIG1-215ENST00000597901 FAM86B1E9PN63 330 aa17.18■□□□□ 0.34
LIG1-215ENST00000597901 CAND2O75155 1236 aa17.18■□□□□ 0.34
LIG1-215ENST00000597901 FAM86B2P0C5J1 330 aa17.18■□□□□ 0.34
LIG1-215ENST00000597901 MARK3P27448 753 aa17.18■□□□□ 0.34
LIG1-215ENST00000597901 WDR5P61964 334 aaKnown RBP17.18■□□□□ 0.34
LIG1-215ENST00000597901 ITGB3BPQ13352 177 aaPredicted RBP17.18■□□□□ 0.34
LIG1-215ENST00000597901 ADGRE1Q14246 886 aa17.18■□□□□ 0.34
LIG1-215ENST00000597901 PPP2R2DQ66LE6 453 aa17.18■□□□□ 0.34
LIG1-215ENST00000597901 NIPA1Q7RTP0 329 aa17.18■□□□□ 0.34
LIG1-215ENST00000597901 PLA2G4DQ86XP0 818 aa17.18■□□□□ 0.34
LIG1-215ENST00000597901 DBF4BQ8NFT6 615 aa17.18■□□□□ 0.34
LIG1-215ENST00000597901 PDRG1Q9NUG6 133 aa17.18■□□□□ 0.34
LIG1-215ENST00000597901 EMSYQ7Z589 1322 aa17.18■□□□□ 0.34
LIG1-215ENST00000597901 EFCAB14O75071 495 aa17.17■□□□□ 0.34
LIG1-215ENST00000597901 ATG7O95352 703 aa17.17■□□□□ 0.34
LIG1-215ENST00000597901 CA3P07451 260 aa17.17■□□□□ 0.34
LIG1-215ENST00000597901 ACTR2P61160 394 aa17.17■□□□□ 0.34
LIG1-215ENST00000597901 SSRP1Q08945 709 aaKnown RBP17.17■□□□□ 0.34
LIG1-215ENST00000597901 PPFIA1Q13136 1202 aa17.17■□□□□ 0.34
LIG1-215ENST00000597901 FAM26DQ5JW98 314 aa17.17■□□□□ 0.34
LIG1-215ENST00000597901 TMCO2Q7Z6W1 182 aaPredicted RBP17.17■□□□□ 0.34
LIG1-215ENST00000597901 REXO1Q8N1G1 1221 aaKnown RBP17.17■□□□□ 0.34
LIG1-215ENST00000597901 OSBPL7Q9BZF2 842 aa17.17■□□□□ 0.34
LIG1-215ENST00000597901 AZI2Q9H6S1 392 aa17.17■□□□□ 0.34
LIG1-215ENST00000597901 IGLV3-22A0A075B6J6 115 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 TLL1O43897 1013 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 CTSHP09668 335 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 INSRRP14616 1297 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 STAT5BP51692 787 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 DEFB103AP81534 67 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 GRIK4Q16099 956 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 PLEKHG4Q58EX7 1191 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 MARCH8Q5T0T0 291 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 PLPPR4Q7Z2D5 763 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 RPAINQ86UA6 219 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 BICD2Q8TD16 824 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 ZBED2Q9BTP6 218 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 SH3GLB2Q9NR46 395 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 VPS54Q9P1Q0 977 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 COL6A3P12111 3177 aa17.16■□□□□ 0.34
LIG1-215ENST00000597901 RRN3P2A6NIE6 340 aa17.15■□□□□ 0.34
LIG1-215ENST00000597901 CPLX1O14810 134 aa17.15■□□□□ 0.34
LIG1-215ENST00000597901 DHX15O43143 795 aaKnown RBP17.15■□□□□ 0.34
LIG1-215ENST00000597901 CCNE2O96020 404 aa17.15■□□□□ 0.34
LIG1-215ENST00000597901 IGFBP4P22692 258 aa17.15■□□□□ 0.34
LIG1-215ENST00000597901 NLRP5P59047 1200 aa17.15■□□□□ 0.34
LIG1-215ENST00000597901 TAP1Q03518 808 aa17.15■□□□□ 0.34
LIG1-215ENST00000597901 STK3Q13188 491 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms