RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 EPC2Q52LR7 807 aa18.32■□□□□ 0.52
LINC02560-201ENST00000596379 FAM26DQ5JW98 314 aa18.32■□□□□ 0.52
LINC02560-201ENST00000596379 TMTC2Q8N394 836 aa18.32■□□□□ 0.52
LINC02560-201ENST00000596379 GIMAP8Q8ND71 665 aaPredicted RBP18.32■□□□□ 0.52
LINC02560-201ENST00000596379 YME1L1Q96TA2 773 aa18.32■□□□□ 0.52
LINC02560-201ENST00000596379 MTA3Q9BTC8 594 aa18.32■□□□□ 0.52
LINC02560-201ENST00000596379 UBE2ZQ9H832 354 aaPredicted RBP18.32■□□□□ 0.52
LINC02560-201ENST00000596379 PSTPIP2Q9H939 334 aa18.32■□□□□ 0.52
LINC02560-201ENST00000596379 NRCAMQ92823 1304 aa18.31■□□□□ 0.52
LINC02560-201ENST00000596379 SH2B2O14492 632 aaPredicted RBP18.31■□□□□ 0.52
LINC02560-201ENST00000596379 TCF7P36402 384 aaPredicted RBP18.31■□□□□ 0.52
LINC02560-201ENST00000596379 COL9A3Q14050 684 aaPredicted RBP18.31■□□□□ 0.52
LINC02560-201ENST00000596379 APBB2Q92870 758 aa18.31■□□□□ 0.52
LINC02560-201ENST00000596379 GPRASP2Q96D09 838 aa18.31■□□□□ 0.52
LINC02560-201ENST00000596379 MRPL38Q96DV4 380 aaKnown RBP18.31■□□□□ 0.52
LINC02560-201ENST00000596379 SAMD11Q96NU1 681 aa18.31■□□□□ 0.52
LINC02560-201ENST00000596379 hCG_1642624A0A1W2PR95 340 aa18.3■□□□□ 0.52
LINC02560-201ENST00000596379 CHRNA1P02708 482 aa18.3■□□□□ 0.52
LINC02560-201ENST00000596379 KCNA2P16389 499 aa18.3■□□□□ 0.52
LINC02560-201ENST00000596379 RAB11FIP4Q86YS3 637 aa18.3■□□□□ 0.52
LINC02560-201ENST00000596379 TMEM192Q8IY95 271 aa18.3■□□□□ 0.52
LINC02560-201ENST00000596379 SEPT1Q8WYJ6 367 aa18.3■□□□□ 0.52
LINC02560-201ENST00000596379 TMEM87BQ96K49 555 aa18.3■□□□□ 0.52
LINC02560-201ENST00000596379 IFIH1Q9BYX4 1025 aaKnown RBP18.3■□□□□ 0.52
LINC02560-201ENST00000596379 LSG1Q9H089 658 aaKnown RBP18.3■□□□□ 0.52
LINC02560-201ENST00000596379 NLRC5Q86WI3 1866 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 GSTTP1A0A1W2PQM5 241 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 H3BNC9 293 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 ITGB5P18084 799 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 KCNA5P22460 613 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 LIFRP42702 1097 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 GPM6BQ13491 265 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 UBE2SQ16763 222 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 PTPROQ16827 1216 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 LEXMQ3ZCV2 418 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 RUFY4Q6ZNE9 571 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 CCDC82Q8N4S0 544 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.29■□□□□ 0.52
LINC02560-201ENST00000596379 KHSRPQ92945 711 aaKnown RBP eCLIP18.29■□□□□ 0.52
LINC02560-201ENST00000596379 CDHR1Q96JP9 859 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 CD320Q9NPF0 282 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 PKD2L1Q9P0L9 805 aa18.29■□□□□ 0.52
LINC02560-201ENST00000596379 SLC27A2O14975 620 aa18.28■□□□□ 0.52
LINC02560-201ENST00000596379 CALM1P0DP23 149 aa18.28■□□□□ 0.52
LINC02560-201ENST00000596379 CALM2P0DP24 149 aa18.28■□□□□ 0.52
LINC02560-201ENST00000596379 CALM3P0DP25 149 aa18.28■□□□□ 0.52
LINC02560-201ENST00000596379 MARK3P27448 753 aa18.28■□□□□ 0.52
LINC02560-201ENST00000596379 PPFIA1Q13136 1202 aa18.28■□□□□ 0.52
LINC02560-201ENST00000596379 RPAINQ86UA6 219 aa18.28■□□□□ 0.52
LINC02560-201ENST00000596379 LRFN3Q9BTN0 628 aa18.28■□□□□ 0.52
LINC02560-201ENST00000596379 LRRC2Q9BYS8 371 aa18.28■□□□□ 0.52
LINC02560-201ENST00000596379 UBIAD1Q9Y5Z9 338 aa18.28■□□□□ 0.52
LINC02560-201ENST00000596379 SLC12A7Q9Y666 1083 aa18.28■□□□□ 0.52
LINC02560-201ENST00000596379 SPDYE3A6NKU9 549 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 GHRP10912 638 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 MTMR1Q13613 665 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 GRIK4Q16099 956 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 TAF2Q6P1X5 1199 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 FANCBQ8NB91 859 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 BANK1Q8NDB2 785 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 GLG1Q92896 1179 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 IL17RAQ96F46 866 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 EHMT1Q9H9B1 1298 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 ERAP1Q9NZ08 941 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 PCDHA6Q9UN73 950 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 PCDHA8Q9Y5H6 950 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 MYO7AQ13402 2215 aa18.27■□□□□ 0.52
LINC02560-201ENST00000596379 ENPP3O14638 875 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 MAFGO15525 162 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 MGAT3Q09327 533 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 LPIN1Q14693 890 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 NECTIN1Q15223 517 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 MARCH8Q5T0T0 291 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 CREB3L3Q68CJ9 461 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 TMTC3Q6ZXV5 915 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 RSPH3Q86UC2 560 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 FIBCD1Q8N539 461 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 DNAJB3Q8WWF6 145 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 ESYT1Q9BSJ8 1104 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 SMARCAD1Q9H4L7 1026 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 JADE2Q9NQC1 790 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 TUBE1Q9UJT0 475 aa18.26■□□□□ 0.51
LINC02560-201ENST00000596379 RALGAPA2Q2PPJ7 1873 aa18.25■□□□□ 0.51
LINC02560-201ENST00000596379 IL9P15248 144 aa18.25■□□□□ 0.51
LINC02560-201ENST00000596379 TIGD5Q53EQ6 642 aa18.25■□□□□ 0.51
LINC02560-201ENST00000596379 TMEM31Q5JXX7 168 aa18.25■□□□□ 0.51
LINC02560-201ENST00000596379 PTCRAQ6ISU1 281 aaPredicted RBP18.25■□□□□ 0.51
LINC02560-201ENST00000596379 HEATR3Q7Z4Q2 680 aa18.25■□□□□ 0.51
LINC02560-201ENST00000596379 FAM178BQ8IXR5 827 aa18.25■□□□□ 0.51
LINC02560-201ENST00000596379 NEK9Q8TD19 979 aa18.25■□□□□ 0.51
LINC02560-201ENST00000596379 MBLAC1A4D2B0 266 aaPredicted RBP18.24■□□□□ 0.51
LINC02560-201ENST00000596379 GRXCR2A6NFK2 248 aa18.24■□□□□ 0.51
LINC02560-201ENST00000596379 PI4K2BG5E9Z4 385 aa18.24■□□□□ 0.51
LINC02560-201ENST00000596379 H3BQ06 376 aaPredicted RBP18.24■□□□□ 0.51
LINC02560-201ENST00000596379 PLA2G5P39877 138 aa18.24■□□□□ 0.51
LINC02560-201ENST00000596379 IGBP1P78318 339 aa18.24■□□□□ 0.51
LINC02560-201ENST00000596379 TCEAL5Q5H9L2 206 aa18.24■□□□□ 0.51
LINC02560-201ENST00000596379 FBXO47Q5MNV8 452 aa18.24■□□□□ 0.51
LINC02560-201ENST00000596379 MICU3Q86XE3 530 aa18.24■□□□□ 0.51
LINC02560-201ENST00000596379 GJD3Q8N144 294 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms