RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 CAND2O75155 1236 aa23.51■■□□□ 1.35
TRIM47-207ENST00000593089 TCF7P36402 384 aaPredicted RBP23.51■■□□□ 1.35
TRIM47-207ENST00000593089 ERVK-21P61565 698 aa23.51■■□□□ 1.35
TRIM47-207ENST00000593089 MKRN4PQ13434 485 aaPredicted RBP23.51■■□□□ 1.35
TRIM47-207ENST00000593089 TMTC3Q6ZXV5 915 aa23.51■■□□□ 1.35
TRIM47-207ENST00000593089 HEATR3Q7Z4Q2 680 aa23.51■■□□□ 1.35
TRIM47-207ENST00000593089 SKAP1Q86WV1 359 aa23.51■■□□□ 1.35
TRIM47-207ENST00000593089 LMBR1Q8WVP7 490 aa23.51■■□□□ 1.35
TRIM47-207ENST00000593089 SEPT8Q92599 483 aa23.51■■□□□ 1.35
TRIM47-207ENST00000593089 PKD2L1Q9P0L9 805 aa23.51■■□□□ 1.35
TRIM47-207ENST00000593089 COG5Q9UP83 839 aa23.51■■□□□ 1.35
TRIM47-207ENST00000593089 INSL6Q9Y581 213 aa23.51■■□□□ 1.35
TRIM47-207ENST00000593089 SPDYE3A6NKU9 549 aa23.5■■□□□ 1.35
TRIM47-207ENST00000593089 KCNA2P16389 499 aa23.5■■□□□ 1.35
TRIM47-207ENST00000593089 ITGB5P18084 799 aa23.5■■□□□ 1.35
TRIM47-207ENST00000593089 CDHR1Q96JP9 859 aa23.5■■□□□ 1.35
TRIM47-207ENST00000593089 XIRP2A4UGR9 3374 aa23.5■■□□□ 1.35
TRIM47-207ENST00000593089 ADAM17P78536 824 aa23.49■■□□□ 1.35
TRIM47-207ENST00000593089 SYNE3Q6ZMZ3 975 aa23.49■■□□□ 1.35
TRIM47-207ENST00000593089 HLA-CQ95604 372 aa23.49■■□□□ 1.35
TRIM47-207ENST00000593089 LMCD1Q9NZU5 365 aa23.49■■□□□ 1.35
TRIM47-207ENST00000593089 PCDHA6Q9UN73 950 aa23.49■■□□□ 1.35
TRIM47-207ENST00000593089 PCDHA8Q9Y5H6 950 aa23.49■■□□□ 1.35
TRIM47-207ENST00000593089 UBIAD1Q9Y5Z9 338 aa23.49■■□□□ 1.35
TRIM47-207ENST00000593089 UPP2O95045 317 aa23.48■■□□□ 1.35
TRIM47-207ENST00000593089 HTRA4P83105 476 aaPredicted RBP23.48■■□□□ 1.35
TRIM47-207ENST00000593089 MTMR1Q13613 665 aa23.48■■□□□ 1.35
TRIM47-207ENST00000593089 RNF20Q5VTR2 975 aa23.48■■□□□ 1.35
TRIM47-207ENST00000593089 SGMS1Q86VZ5 419 aa23.48■■□□□ 1.35
TRIM47-207ENST00000593089 C17orf80Q9BSJ5 609 aa23.48■■□□□ 1.35
TRIM47-207ENST00000593089 NRCAMQ92823 1304 aa23.48■■□□□ 1.35
TRIM47-207ENST00000593089 GSTTP1A0A1W2PQM5 241 aa23.47■■□□□ 1.35
TRIM47-207ENST00000593089 MARK3P27448 753 aa23.47■■□□□ 1.35
TRIM47-207ENST00000593089 FBXO22Q8NEZ5 403 aa23.47■■□□□ 1.35
TRIM47-207ENST00000593089 SEPT1Q8WYJ6 367 aa23.47■■□□□ 1.35
TRIM47-207ENST00000593089 TCEANC2Q96MN5 208 aa23.47■■□□□ 1.35
TRIM47-207ENST00000593089 NEK1Q96PY6 1258 aa23.47■■□□□ 1.35
TRIM47-207ENST00000593089 PPFIA1Q13136 1202 aa23.46■■□□□ 1.35
TRIM47-207ENST00000593089 BMP2KLQ5H9B9 411 aa23.46■■□□□ 1.35
TRIM47-207ENST00000593089 FAM26DQ5JW98 314 aa23.46■■□□□ 1.35
TRIM47-207ENST00000593089 WWC2Q6AWC2 1192 aa23.46■■□□□ 1.35
TRIM47-207ENST00000593089 APOA5Q6Q788 366 aa23.46■■□□□ 1.35
TRIM47-207ENST00000593089 RUFY4Q6ZNE9 571 aa23.46■■□□□ 1.35
TRIM47-207ENST00000593089 CNTNAP5Q8WYK1 1306 aa23.46■■□□□ 1.35
TRIM47-207ENST00000593089 GLG1Q92896 1179 aa23.46■■□□□ 1.35
TRIM47-207ENST00000593089 YME1L1Q96TA2 773 aa23.46■■□□□ 1.35
TRIM47-207ENST00000593089 EHMT1Q9H9B1 1298 aa23.46■■□□□ 1.35
TRIM47-207ENST00000593089 JADE2Q9NQC1 790 aa23.46■■□□□ 1.35
TRIM47-207ENST00000593089 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.45■■□□□ 1.34
TRIM47-207ENST00000593089 SP7Q8TDD2 431 aaPredicted RBP23.45■■□□□ 1.34
TRIM47-207ENST00000593089 APBB2Q92870 758 aa23.45■■□□□ 1.34
TRIM47-207ENST00000593089 TOP1MTQ969P6 601 aa23.45■■□□□ 1.34
TRIM47-207ENST00000593089 IFIH1Q9BYX4 1025 aaKnown RBP23.45■■□□□ 1.34
TRIM47-207ENST00000593089 RBM28Q9NW13 759 aaKnown RBP23.45■■□□□ 1.34
TRIM47-207ENST00000593089 ERAP1Q9NZ08 941 aa23.45■■□□□ 1.34
TRIM47-207ENST00000593089 CHRNA1P02708 482 aa23.44■■□□□ 1.34
TRIM47-207ENST00000593089 NAPAP54920 295 aa23.44■■□□□ 1.34
TRIM47-207ENST00000593089 GRIK4Q16099 956 aa23.44■■□□□ 1.34
TRIM47-207ENST00000593089 PGBD1Q96JS3 809 aa23.44■■□□□ 1.34
TRIM47-207ENST00000593089 SMARCAD1Q9H4L7 1026 aa23.44■■□□□ 1.34
TRIM47-207ENST00000593089 BRPF3Q9ULD4 1205 aa23.44■■□□□ 1.34
TRIM47-207ENST00000593089 MAFGO15525 162 aa23.43■■□□□ 1.34
TRIM47-207ENST00000593089 GHRP10912 638 aa23.43■■□□□ 1.34
TRIM47-207ENST00000593089 IGBP1P78318 339 aa23.43■■□□□ 1.34
TRIM47-207ENST00000593089 EXOSC10Q01780 885 aaKnown RBP23.43■■□□□ 1.34
TRIM47-207ENST00000593089 RTN1Q16799 776 aa23.43■■□□□ 1.34
TRIM47-207ENST00000593089 TYW1BQ6NUM6 668 aa23.43■■□□□ 1.34
TRIM47-207ENST00000593089 TAF2Q6P1X5 1199 aa23.43■■□□□ 1.34
TRIM47-207ENST00000593089 TUBE1Q9UJT0 475 aa23.43■■□□□ 1.34
TRIM47-207ENST00000593089 NLRC5Q86WI3 1866 aa23.43■■□□□ 1.34
TRIM47-207ENST00000593089 NCOR1O75376 2440 aa23.42■■□□□ 1.34
TRIM47-207ENST00000593089 ZBTB43O43298 467 aa23.42■■□□□ 1.34
TRIM47-207ENST00000593089 ADCK5Q3MIX3 580 aa23.42■■□□□ 1.34
TRIM47-207ENST00000593089 EPC2Q52LR7 807 aa23.42■■□□□ 1.34
TRIM47-207ENST00000593089 CENPQQ7L2Z9 268 aaPredicted RBP23.42■■□□□ 1.34
TRIM47-207ENST00000593089 DHX32Q7L7V1 743 aaKnown RBP23.42■■□□□ 1.34
TRIM47-207ENST00000593089 RSPH3Q86UC2 560 aa23.42■■□□□ 1.34
TRIM47-207ENST00000593089 RASEFQ8IZ41 740 aa23.42■■□□□ 1.34
TRIM47-207ENST00000593089 DNAJB3Q8WWF6 145 aa23.42■■□□□ 1.34
TRIM47-207ENST00000593089 MXRA8Q9BRK3 442 aa23.42■■□□□ 1.34
TRIM47-207ENST00000593089 JPH1Q9HDC5 661 aaPredicted RBP23.42■■□□□ 1.34
TRIM47-207ENST00000593089 RIC8AQ9NPQ8 531 aa23.42■■□□□ 1.34
TRIM47-207ENST00000593089 KCNH7Q9NS40 1196 aa23.42■■□□□ 1.34
TRIM47-207ENST00000593089 COL9A1P20849 921 aa23.41■■□□□ 1.34
TRIM47-207ENST00000593089 MGAT3Q09327 533 aa23.41■■□□□ 1.34
TRIM47-207ENST00000593089 MARCH8Q5T0T0 291 aa23.41■■□□□ 1.34
TRIM47-207ENST00000593089 RPAINQ86UA6 219 aa23.41■■□□□ 1.34
TRIM47-207ENST00000593089 CYP2W1Q8TAV3 490 aa23.41■■□□□ 1.34
TRIM47-207ENST00000593089 SAMD11Q96NU1 681 aa23.41■■□□□ 1.34
TRIM47-207ENST00000593089 PCYT2Q99447 389 aa23.41■■□□□ 1.34
TRIM47-207ENST00000593089 SLC9A2Q9UBY0 812 aa23.41■■□□□ 1.34
TRIM47-207ENST00000593089 V9GY48 417 aaPredicted RBP23.41■■□□□ 1.34
TRIM47-207ENST00000593089 GOLGA8AA7E2F4 631 aa23.4■■□□□ 1.34
TRIM47-207ENST00000593089 GOLGA8BA8MQT2 603 aa23.4■■□□□ 1.34
TRIM47-207ENST00000593089 ADCY7P51828 1080 aa23.4■■□□□ 1.34
TRIM47-207ENST00000593089 FUT2Q10981 343 aa23.4■■□□□ 1.34
TRIM47-207ENST00000593089 LPIN1Q14693 890 aa23.4■■□□□ 1.34
TRIM47-207ENST00000593089 PPP1R18Q6NYC8 613 aa23.4■■□□□ 1.34
TRIM47-207ENST00000593089 ZBTB10Q96DT7 871 aa23.4■■□□□ 1.34
TRIM47-207ENST00000593089 AZI2Q9H6S1 392 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms